{"id":"https://openalex.org/W2061202168","doi":"https://doi.org/10.1104/pp.122.1.147","title":"Elementary Processes of Photoperception by Phytochrome A for High-Irradiance Response of Hypocotyl Elongation in Arabidopsis,","display_name":"Elementary Processes of Photoperception by Phytochrome A for High-Irradiance Response of Hypocotyl Elongation in Arabidopsis,","publication_year":2000,"publication_date":"2000-01-01","ids":{"openalex":"https://openalex.org/W2061202168","doi":"https://doi.org/10.1104/pp.122.1.147","mag":"2061202168","pmid":"https://pubmed.ncbi.nlm.nih.gov/10631258","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/58853"},"language":"en","primary_location":{"id":"doi:10.1104/pp.122.1.147","doi":"https://doi.org/10.1104/pp.122.1.147","is_oa":false,"landing_page_url":"https://doi.org/10.1104/pp.122.1.147","pdf_url":null,"source":{"id":"https://openalex.org/S42294715","display_name":"PLANT PHYSIOLOGY","issn_l":"0032-0889","issn":["0032-0889","1532-2548"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC58853/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053394575","display_name":"Tomoko Shinomura","orcid":"https://orcid.org/0000-0002-2718-2188","observed_orcids":["https://orcid.org/0000-0002-2718-2188"]},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tomoko Shinomura","raw_affiliation_strings":["Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan","institution_ids":["https://openalex.org/I65143321"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Kenko Uchida","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kenko Uchida","raw_affiliation_strings":["Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan","institution_ids":["https://openalex.org/I65143321"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108419985","display_name":"Masaki Furuya","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masaki Furuya","raw_affiliation_strings":["Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hitachi Advanced Research Laboratory, Hatoyama, Saitama 350\u20130395, Japan","institution_ids":["https://openalex.org/I65143321"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I65143321"],"apc_list":{"value":3851,"currency":"USD","value_usd":3851},"apc_paid":null,"fwci":26.8972,"has_fulltext":false,"cited_by_count":201,"citation_normalized_percentile":{"value":0.99610965,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"122","issue":"1","first_page":"147","last_page":"156"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12475","display_name":"Plant Parasitism and Resistance","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phytochrome-a","display_name":"phytochrome A","score":0.9940000176429749},{"id":"https://openalex.org/keywords/high-irradiance-response","display_name":"high irradiance response","score":0.9290000200271606},{"id":"https://openalex.org/keywords/hypocotyl-elongation","display_name":"hypocotyl elongation","score":0.9879999756813049},{"id":"https://openalex.org/keywords/light-perception","display_name":"light perception","score":0.8690000176429749},{"id":"https://openalex.org/keywords/far-red-light","display_name":"far-red light","score":0.8579999804496765},{"id":"https://openalex.org/keywords/intermittent-irradiation","display_name":"intermittent irradiation","score":0.8669999837875366},{"id":"https://openalex.org/keywords/action-spectrum","display_name":"action spectrum","score":0.9890000224113464},{"id":"https://openalex.org/keywords/phytochrome-b","display_name":"phytochrome B","score":0.8370000123977661},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.8090000152587891}],"concepts":[{"id":"https://openalex.org/C90180588","wikidata":"https://www.wikidata.org/wiki/Q24779306","display_name":"Phytochrome","level":3,"score":0.964483380317688},{"id":"https://openalex.org/C105409712","wikidata":"https://www.wikidata.org/wiki/Q1426202","display_name":"Hypocotyl","level":2,"score":0.8606225252151489},{"id":"https://openalex.org/C12530168","wikidata":"https://www.wikidata.org/wiki/Q4677424","display_name":"Action spectrum","level":2,"score":0.8301783800125122},{"id":"https://openalex.org/C6929264","wikidata":"https://www.wikidata.org/wiki/Q5434480","display_name":"Far-red","level":3,"score":0.8179417252540588},{"id":"https://openalex.org/C2909544318","wikidata":"https://www.wikidata.org/wiki/Q24779306","display_name":"Phytochrome A","level":5,"score":0.7340156435966492},{"id":"https://openalex.org/C111337013","wikidata":"https://www.wikidata.org/wiki/Q2737837","display_name":"Irradiation","level":2,"score":0.6506224870681763},{"id":"https://openalex.org/C33947775","wikidata":"https://www.wikidata.org/wiki/Q271439","display_name":"Elongation","level":3,"score":0.6465122699737549},{"id":"https://openalex.org/C2781446133","wikidata":"https://www.wikidata.org/wiki/Q1935099","display_name":"Photomorphogenesis","level":5,"score":0.6329672336578369},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.572747528553009},{"id":"https://openalex.org/C2779027399","wikidata":"https://www.wikidata.org/wiki/Q204170","display_name":"Darkness","level":2,"score":0.49470850825309753},{"id":"https://openalex.org/C22078206","wikidata":"https://www.wikidata.org/wiki/Q1418023","display_name":"Fluence","level":3,"score":0.44220927357673645},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.3845965564250946},{"id":"https://openalex.org/C2986477067","wikidata":"https://www.wikidata.org/wiki/Q1210055","display_name":"Red light","level":2,"score":0.35598498582839966},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3217923045158386},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.3202389180660248},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.317200243473053},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.28332337737083435},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.18028080463409424},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.16652604937553406},{"id":"https://openalex.org/C191897082","wikidata":"https://www.wikidata.org/wiki/Q11467","display_name":"Metallurgy","level":1,"score":0.0},{"id":"https://openalex.org/C112950240","wikidata":"https://www.wikidata.org/wiki/Q76005","display_name":"Ultimate tensile strength","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185544564","wikidata":"https://www.wikidata.org/wiki/Q81197","display_name":"Nuclear physics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008027","descriptor_name":"Light","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010834","descriptor_name":"Phytochrome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000528","qualifier_name":"radiation effects","is_major_topic":false},{"descriptor_ui":"D018546","descriptor_name":"Hypocotyl","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D018546","descriptor_name":"Hypocotyl","qualifier_ui":"Q000528","qualifier_name":"radiation effects","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051942","descriptor_name":"Phytochrome A","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1104/pp.122.1.147","doi":"https://doi.org/10.1104/pp.122.1.147","is_oa":false,"landing_page_url":"https://doi.org/10.1104/pp.122.1.147","pdf_url":null,"source":{"id":"https://openalex.org/S42294715","display_name":"PLANT PHYSIOLOGY","issn_l":"0032-0889","issn":["0032-0889","1532-2548"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiology","raw_type":"journal-article"},{"id":"pmid:10631258","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/10631258","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant physiology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:58853","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC58853/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiol","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:58853","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC58853/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiol","raw_type":"Text"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":66,"referenced_works":["https://openalex.org/W1208155","https://openalex.org/W42591571","https://openalex.org/W117887593","https://openalex.org/W136272937","https://openalex.org/W145822331","https://openalex.org/W200406503","https://openalex.org/W560863201","https://openalex.org/W583192327","https://openalex.org/W621622487","https://openalex.org/W1617085054","https://openalex.org/W1763052962","https://openalex.org/W1873916202","https://openalex.org/W1877467445","https://openalex.org/W1956176549","https://openalex.org/W1956215633","https://openalex.org/W1967551062","https://openalex.org/W1969472583","https://openalex.org/W1977421826","https://openalex.org/W1985777732","https://openalex.org/W1988043328","https://openalex.org/W1999850786","https://openalex.org/W2003241415","https://openalex.org/W2003280534","https://openalex.org/W2005233134","https://openalex.org/W2011134292","https://openalex.org/W2012416171","https://openalex.org/W2015054857","https://openalex.org/W2017701171","https://openalex.org/W2023716724","https://openalex.org/W2029991886","https://openalex.org/W2032910781","https://openalex.org/W2035677903","https://openalex.org/W2040615180","https://openalex.org/W2045031735","https://openalex.org/W2045109816","https://openalex.org/W2054927441","https://openalex.org/W2055601034","https://openalex.org/W2057937199","https://openalex.org/W2060349030","https://openalex.org/W2062861539","https://openalex.org/W2064869139","https://openalex.org/W2073641358","https://openalex.org/W2075092763","https://openalex.org/W2076370834","https://openalex.org/W2081442903","https://openalex.org/W2091861697","https://openalex.org/W2099449763","https://openalex.org/W2103748065","https://openalex.org/W2105514230","https://openalex.org/W2110854519","https://openalex.org/W2118773089","https://openalex.org/W2122893050","https://openalex.org/W2129810530","https://openalex.org/W2136281550","https://openalex.org/W2143149221","https://openalex.org/W2143187086","https://openalex.org/W2148076607","https://openalex.org/W2151624481","https://openalex.org/W2157651845","https://openalex.org/W2158522991","https://openalex.org/W2159944499","https://openalex.org/W2164556705","https://openalex.org/W2165743881","https://openalex.org/W2167323541","https://openalex.org/W4300063429","https://openalex.org/W6675582374"],"related_works":["https://openalex.org/W1976719525","https://openalex.org/W6887378476","https://openalex.org/W2136209278","https://openalex.org/W2062862537","https://openalex.org/W2060984839","https://openalex.org/W7099048307","https://openalex.org/W7099690001","https://openalex.org/W7098411620","https://openalex.org/W2044002469","https://openalex.org/W2146667158"],"abstract_inverted_index":{"Elementary":[0],"processes":[1],"of":[2,13,29,50,64,100,113,140,178],"photoperception":[3,179],"by":[4,39,81,180,189],"phytochrome":[5,104,152,195],"A":[6],"(PhyA)":[7],"for":[8,55,78,182,191,197],"the":[9,61,75,79,97,121,138],"high-irradiance":[10],"response":[11,80],"(HIR)":[12],"hypocotyl":[14],"elongation":[15],"in":[16,67,102,143,154],"Arabidopsis":[17],"were":[18],"examined":[19],"using":[20,84],"a":[21,164],"newly":[22],"designed":[23],"irradiator":[24],"with":[25,32,42,96,108,127],"LED.":[26],"The":[27,90,146,176],"effect":[28,119,139],"continuous":[30],"irradiation":[31,41,83,107,126],"far-red":[33],"(FR)":[34],"light":[35,44,70,114,129,134,142],"could":[36],"be":[37],"replaced":[38],"intermittent":[40,82,125],"FR":[43,69,133,141],"pulses":[45],"if":[46],"given":[47],"at":[48],"intervals":[49],"3":[51],"min":[52],"or":[53],"less":[54],"24":[56],"h.":[57],"In":[58,123],"this":[59],"response,":[60],"Bunsen-Roscoe":[62],"law":[63],"reciprocity":[65],"held":[66],"each":[68,132,144],"pulse.":[71],"Therefore,":[72],"we":[73],"determined":[74],"action":[76,92],"spectrum":[77,93,99],"phyB":[85],"and":[86,162,194],"phyAphyB":[87],"double":[88],"mutants.":[89],"resultant":[91],"correlated":[94],"well":[95],"absorption":[98],"PhyA":[101,181,190],"far-red-absorbing":[103],"(Pfr).":[105],"Intermittent":[106],"550":[109],"to":[110,173],"667":[111],"nm":[112],"alone":[115],"had":[116],"no":[117],"significant":[118],"on":[120],"response.":[122],"contrast,":[124],"red":[128],"immediately":[130],"after":[131],"pulse":[135],"completely":[136],"reversed":[137],"cycle.":[145],"results":[147],"indicate":[148],"that":[149,163,188],"neither":[150],"red-absorbing":[151,174],"synthesized":[153],"darkness":[155],"nor":[156],"photoconverted":[157],"Pfr":[158,172],"are":[159],"physiologically":[160],"active,":[161],"short-lived":[165],"signal":[166],"is":[167,184],"induced":[168],"during":[169],"photoconversion":[170],"from":[171,187],"phytochrome.":[175],"mode":[177],"HIR":[183],"essentially":[185],"different":[186],"very-low-fluence":[192],"responses":[193],"B":[196],"low-fluence":[198],"responses.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
