{"id":"https://openalex.org/W2053809486","doi":"https://doi.org/10.1371/journal.pone.0087869","title":"Sense Transgene-Induced Post-Transcriptional Gene Silencing in Tobacco Compromises the Splicing of Endogenous Counterpart Genes","display_name":"Sense Transgene-Induced Post-Transcriptional Gene Silencing in Tobacco Compromises the Splicing of Endogenous Counterpart Genes","publication_year":2014,"publication_date":"2014-02-21","ids":{"openalex":"https://openalex.org/W2053809486","doi":"https://doi.org/10.1371/journal.pone.0087869","mag":"2053809486","pmid":"https://pubmed.ncbi.nlm.nih.gov/24586294","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3931610"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pone.0087869","doi":"https://doi.org/10.1371/journal.pone.0087869","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0087869","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0087869&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0087869&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Mi-Rae Shin","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Mi-Rae Shin","raw_affiliation_strings":["Graduate School of Advanced Integration Science, Chiba University, Inage-ku, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Advanced Integration Science, Chiba University, Inage-ku, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085484993","display_name":"Masaya Natsuume","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masaya Natsuume","raw_affiliation_strings":["Graduate School of Horticulture, Chiba University, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Horticulture, Chiba University, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027256693","display_name":"Takashi Matsumoto","orcid":"https://orcid.org/0000-0002-5274-2669","observed_orcids":["https://orcid.org/0000-0002-5274-2669"]},"institutions":[{"id":"https://openalex.org/I127317711","display_name":"Tokyo University of Agriculture","ror":"https://ror.org/05crbcr45","country_code":"JP","type":"education","lineage":["https://openalex.org/I127317711"]},{"id":"https://openalex.org/I4405286359","display_name":"NODAI Genome Research Center","ror":"https://ror.org/01xe1vj52","country_code":"JP","type":"facility","lineage":["https://openalex.org/I127317711","https://openalex.org/I4405286359"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takashi Matsumoto","raw_affiliation_strings":["Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I127317711","https://openalex.org/I4405286359"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017778241","display_name":"Mitsumasa Hanaoka","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Mitsumasa Hanaoka","raw_affiliation_strings":["Graduate School of Horticulture, Chiba University, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Horticulture, Chiba University, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075908089","display_name":"Misaki Imai","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I127317711","display_name":"Tokyo University of Agriculture","ror":"https://ror.org/05crbcr45","country_code":"JP","type":"education","lineage":["https://openalex.org/I127317711"]},{"id":"https://openalex.org/I4405286359","display_name":"NODAI Genome Research Center","ror":"https://ror.org/01xe1vj52","country_code":"JP","type":"facility","lineage":["https://openalex.org/I127317711","https://openalex.org/I4405286359"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Misaki Imai","raw_affiliation_strings":["Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I127317711","https://openalex.org/I4405286359"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018674881","display_name":"Ken Iijima","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I127317711","display_name":"Tokyo University of Agriculture","ror":"https://ror.org/05crbcr45","country_code":"JP","type":"education","lineage":["https://openalex.org/I127317711"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ken Iijima","raw_affiliation_strings":["Department of Applied Biology and Chemistry, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Applied Biology and Chemistry, Tokyo University of Agriculture, Setagaya-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I127317711"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shin-ichiro Oka","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shin-ichiro Oka","raw_affiliation_strings":["Graduate School of Horticulture, Chiba University, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Horticulture, Chiba University, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112516594","display_name":"Eri Adachi","orcid":"https://orcid.org/0009-0007-2684-3873","observed_orcids":["https://orcid.org/0009-0007-2684-3873"]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Eri Adachi","raw_affiliation_strings":["Graduate School of Science and Technology, Chiba University, Inage-ku, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Science and Technology, Chiba University, Inage-ku, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086034121","display_name":"Hiroaki Kodama","orcid":"https://orcid.org/0000-0003-3652-3316","observed_orcids":["https://orcid.org/0000-0003-3652-3316"]},"institutions":[{"id":"https://openalex.org/I159385669","display_name":"Chiba University","ror":"https://ror.org/01hjzeq58","country_code":"JP","type":"education","lineage":["https://openalex.org/I159385669"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Hiroaki Kodama","raw_affiliation_strings":["Graduate School of Advanced Integration Science, Chiba University, Inage-ku, Chiba, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Advanced Integration Science, Chiba University, Inage-ku, Chiba, Japan","institution_ids":["https://openalex.org/I159385669"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5086034121"],"corresponding_institution_ids":["https://openalex.org/I159385669"],"apc_list":{"value":2382,"currency":"USD","value_usd":2382},"apc_paid":{"value":2382,"currency":"USD","value_usd":2382},"fwci":1.0749,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.77356239,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":96},"biblio":{"volume":"9","issue":"2","first_page":"e87869","last_page":"e87869"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.36570000648498535,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.36570000648498535,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.3296000063419342,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.14579999446868896,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-silencing","display_name":"RNA silencing","score":0.9100000262260437},{"id":"https://openalex.org/keywords/argonaute-1","display_name":"AGO1","score":0.8050000071525574},{"id":"https://openalex.org/keywords/sirna","display_name":"siRNA","score":0.9670000076293945},{"id":"https://openalex.org/keywords/splicing-alterations","display_name":"splicing alterations","score":0.5350000262260437},{"id":"https://openalex.org/keywords/omega-3-fatty-acid-desaturase","display_name":"omega-3 fatty acid desaturase","score":0.9779999852180481},{"id":"https://openalex.org/keywords/silencing-suppressor","display_name":"silencing suppressor","score":0.9259999990463257},{"id":"https://openalex.org/keywords/nicotiana-tabacum","display_name":"tobacco","score":0.5440000295639038}],"concepts":[{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.8528505563735962},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7690895795822144},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.6789542436599731},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.6623227000236511},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.645837664604187},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6193014979362488},{"id":"https://openalex.org/C102230213","wikidata":"https://www.wikidata.org/wiki/Q430117","display_name":"Transgene","level":3,"score":0.47761982679367065},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4439297616481781},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.4335383176803589},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4322693347930908},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.4292415380477905},{"id":"https://openalex.org/C142575336","wikidata":"https://www.wikidata.org/wiki/Q412148","display_name":"Polyadenylation","level":4,"score":0.42390140891075134},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.41854605078697205},{"id":"https://openalex.org/C2191507","wikidata":"https://www.wikidata.org/wiki/Q7277185","display_name":"RNA silencing","level":5,"score":0.4146067202091217}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004721","descriptor_name":"Endoplasmic Reticulum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014026","descriptor_name":"Nicotiana","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019076","descriptor_name":"Transgenes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020133","descriptor_name":"Reverse Transcriptase Polymerase Chain Reaction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D034741","descriptor_name":"RNA, Small Interfering","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D044943","descriptor_name":"Fatty Acid Desaturases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D044943","descriptor_name":"Fatty Acid Desaturases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1371/journal.pone.0087869","doi":"https://doi.org/10.1371/journal.pone.0087869","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0087869","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0087869&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2914914","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3931610","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmid:24586294","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24586294","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PloS one","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3931610","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC3931610/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS One","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.810.7119","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.810.7119","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/b1/35/pone.0087869.PMC3931610.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:e3236f2da9cd4f788dde95d8ff51d7f0","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/e3236f2da9cd4f788dde95d8ff51d7f0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS ONE, Vol 9, Iss 2, p e87869 (2014)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/941366","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/_Sense_Transgene_Induced_Post_Transcriptional_Gene_Silencing_in_Tobacco_Compromises_the_Splicing_of_Endogenous_Counterpart_Genes_/941366","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1371/journal.pone.0087869","doi":"https://doi.org/10.1371/journal.pone.0087869","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0087869","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0087869&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS ONE","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G1160458203","display_name":null,"funder_award_id":"2008-2012","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G4319243776","display_name":"Plant stress responses regulated by the circadian clock","funder_award_id":"26292191","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7467631182","display_name":"Analysis of plastid differentiation by chromatin immunoprecipitation","funder_award_id":"24770037","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320324691","display_name":"Tokyo University of Agriculture","ror":"https://ror.org/05crbcr45"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2053809486.pdf","grobid_xml":"https://content.openalex.org/works/W2053809486.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W642115648","https://openalex.org/W1761541127","https://openalex.org/W1905482560","https://openalex.org/W1967197134","https://openalex.org/W1971881286","https://openalex.org/W1972999456","https://openalex.org/W1981354605","https://openalex.org/W1984694717","https://openalex.org/W1992332038","https://openalex.org/W1994914565","https://openalex.org/W2000611687","https://openalex.org/W2010115995","https://openalex.org/W2014331148","https://openalex.org/W2021098230","https://openalex.org/W2034144108","https://openalex.org/W2034558308","https://openalex.org/W2050347642","https://openalex.org/W2050509627","https://openalex.org/W2062188301","https://openalex.org/W2062916004","https://openalex.org/W2066983027","https://openalex.org/W2070765405","https://openalex.org/W2074342780","https://openalex.org/W2079017128","https://openalex.org/W2086153601","https://openalex.org/W2095653548","https://openalex.org/W2096138645","https://openalex.org/W2097065948","https://openalex.org/W2098314690","https://openalex.org/W2107330252","https://openalex.org/W2109322155","https://openalex.org/W2111810018","https://openalex.org/W2120778382","https://openalex.org/W2127497651","https://openalex.org/W2139093837","https://openalex.org/W2141680751","https://openalex.org/W2154529129","https://openalex.org/W2156348987","https://openalex.org/W2158070006","https://openalex.org/W2158478469","https://openalex.org/W2167454511"],"related_works":["https://openalex.org/W1761541127","https://openalex.org/W1986283003","https://openalex.org/W4361007709","https://openalex.org/W1997989677","https://openalex.org/W4290975681","https://openalex.org/W2494566439","https://openalex.org/W2074342780","https://openalex.org/W1981354605","https://openalex.org/W2174003939","https://openalex.org/W1879128260"],"abstract_inverted_index":{"Sense":[0],"transgene-induced":[1],"post-transcriptional":[2],"gene":[3,168],"silencing":[4,14,123],"(S-PTGS)":[5],"is":[6,43,170],"thought":[7],"to":[8,149],"be":[9],"a":[10,26,44,59],"type":[11],"of":[12,25,39,50,58,92,104,114,143,153,159,166,176],"RNA":[13,22,83],"in":[15,29,80,101,129,140,198],"which":[16],"ARGONAUTE1":[17],"directs":[18],"the":[19,30,36,48,56,81,89,93,102,105,115,130,141,150,164,174,188],"small":[20],"interfering":[21],"(siRNA)-mediated":[23],"cleavage":[24],"target":[27],"mRNA":[28,53],"cytoplasm.":[31],"Here,":[32],"we":[33],"report":[34],"that":[35,146,163,187],"altered":[37],"splicing":[38,177],"endogenous":[40,94,122,192],"counterpart":[41,193],"genes":[42,194],"main":[45],"cause":[46],"for":[47],"reduction":[49],"their":[51],"mature":[52],"levels.":[54],"After":[55],"S-PTGS":[57,106,131,199],"tobacco":[60],"endoplasmic":[61],"reticulum":[62],"\u03c9-3":[63],"fatty":[64],"acid":[65],"desaturase":[66],"(NtFAD3)":[67],"gene,":[68,96,125],"3'-truncated,":[69],"polyadenylated":[70],"endo-NtFAD3":[71,76,167],"transcripts":[72,77,99,111],"and":[73,178,190],"5'-truncated,":[74],"intron-containing":[75,97,109,134,191],"were":[78,118,138],"detected":[79],"total":[82],"fraction.":[84],"Although":[85],"transcription":[86],"proceeded":[87],"until":[88],"last":[90],"exon":[91,116],"NtFAD3":[95,98,110,135,144],"accumulated":[100],"nucleus":[103],"plants.":[107,132,200],"Several":[108],"harboring":[112],"most":[113],"sequences":[117,152],"generated":[119,139],"when":[120],"an":[121],"suppressor":[124],"rgs-CaM,":[126],"was":[127],"overexpressed":[128],"These":[133],"splice":[136,155],"variants":[137],"presence":[142],"siRNAs":[145],"are":[147,195],"homologous":[148],"nucleotide":[151],"these":[154],"variants.":[156],"The":[157],"results":[158,185],"this":[160],"study":[161],"indicate":[162],"inhibition":[165],"expression":[169],"primarily":[171],"directed":[172],"via":[173],"alteration":[175],"not":[179],"by":[180],"cytoplasmic":[181],"slicer":[182],"activity.":[183],"Our":[184],"suggest":[186],"transgene":[189],"differentially":[196],"suppressed":[197]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
