{"id":"https://openalex.org/W2052558341","doi":"https://doi.org/10.1094/phyto.2004.94.7.737","title":"High Genetic Diversity, Phenotypic Uniformity, and Evidence of Outcrossing in Sclerotinia Sclerotiorum in the Columbia Basin of Washington State","display_name":"High Genetic Diversity, Phenotypic Uniformity, and Evidence of Outcrossing in Sclerotinia Sclerotiorum in the Columbia Basin of Washington State","publication_year":2004,"publication_date":"2004-07-01","ids":{"openalex":"https://openalex.org/W2052558341","doi":"https://doi.org/10.1094/phyto.2004.94.7.737","mag":"2052558341","pmid":"https://pubmed.ncbi.nlm.nih.gov/18943906"},"language":"en","primary_location":{"id":"doi:10.1094/phyto.2004.94.7.737","doi":"https://doi.org/10.1094/phyto.2004.94.7.737","is_oa":false,"landing_page_url":"https://doi.org/10.1094/phyto.2004.94.7.737","pdf_url":null,"source":{"id":"https://openalex.org/S85201822","display_name":"Phytopathology","issn_l":"0031-949X","issn":["0031-949X","1943-7684"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology\u00ae","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061153593","display_name":"Zahi K. Atallah","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Z. K. Atallah","raw_affiliation_strings":["Corresponding author: Z. K. Atallah; E-mail address: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","E-mail address: \n                    E-mail Address:\n                    [email\u00a0protected]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Corresponding author: Z. K. Atallah; E-mail address: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","institution_ids":[]},{"raw_affiliation_string":"E-mail address: \n                    E-mail Address:\n                    [email\u00a0protected]","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053292653","display_name":"Bret R. Larget","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"B. Larget","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"middle","author":{"id":null,"display_name":"X. Chen","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"X. Chen","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109413664","display_name":"Dennis Allen Johnson","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"D. A. Johnson","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":6.2686,"has_fulltext":false,"cited_by_count":127,"citation_normalized_percentile":{"value":0.96031012,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"94","issue":"7","first_page":"737","last_page":"742"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12771","display_name":"Plant pathogens and resistance mechanisms","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12771","display_name":"Plant pathogens and resistance mechanisms","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11900","display_name":"Fungal Plant Pathogen Control","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sclerotinia-sclerotiorum","display_name":"Sclerotinia sclerotiorum","score":1.0},{"id":"https://openalex.org/keywords/genetic-diversity","display_name":"genetic diversity","score":0.6990000009536743},{"id":"https://openalex.org/keywords/outcrossing","display_name":"outcrossing","score":0.8489999771118164},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.9020000100135803},{"id":"https://openalex.org/keywords/mycelial-compatibility","display_name":"mycelial compatibility","score":0.7839999794960022},{"id":"https://openalex.org/keywords/linkage-disequilibrium","display_name":"linkage disequilibrium","score":0.8989999890327454},{"id":"https://openalex.org/keywords/apothecia","display_name":"apothecia","score":0.8659999966621399},{"id":"https://openalex.org/keywords/microsatellite-haplotypes","display_name":"microsatellite haplotypes","score":0.7940000295639038},{"id":"https://openalex.org/keywords/pathogen-aggressiveness","display_name":"pathogen aggressiveness","score":0.7400000095367432},{"id":"https://openalex.org/keywords/fungicide-response","display_name":"fungicide response","score":0.7429999709129333},{"id":"https://openalex.org/keywords/temperature-response","display_name":"temperature sensitivity","score":0.6620000004768372},{"id":"https://openalex.org/keywords/disease-management","display_name":"disease management","score":0.7620000243186951},{"id":"https://openalex.org/keywords/columbia-river-basin","display_name":"Columbia River Basin","score":0.8870000243186951}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8985350728034973},{"id":"https://openalex.org/C107917433","wikidata":"https://www.wikidata.org/wiki/Q779009","display_name":"Outcrossing","level":3,"score":0.7803500890731812},{"id":"https://openalex.org/C2778530245","wikidata":"https://www.wikidata.org/wiki/Q2165315","display_name":"Sclerotinia sclerotiorum","level":2,"score":0.7286409735679626},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.5930814146995544},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5347567796707153},{"id":"https://openalex.org/C2777913619","wikidata":"https://www.wikidata.org/wiki/Q1969330","display_name":"Sclerotinia","level":2,"score":0.494942843914032},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.46279358863830566},{"id":"https://openalex.org/C2780624194","wikidata":"https://www.wikidata.org/wiki/Q25109627","display_name":"Stem rot","level":2,"score":0.41534990072250366},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.3685058057308197},{"id":"https://openalex.org/C2780618852","wikidata":"https://www.wikidata.org/wiki/Q79932","display_name":"Pollen","level":2,"score":0.08641043305397034},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.08063697814941406},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1094/phyto.2004.94.7.737","doi":"https://doi.org/10.1094/phyto.2004.94.7.737","is_oa":false,"landing_page_url":"https://doi.org/10.1094/phyto.2004.94.7.737","pdf_url":null,"source":{"id":"https://openalex.org/S85201822","display_name":"Phytopathology","issn_l":"0031-949X","issn":["0031-949X","1943-7684"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology\u00ae","raw_type":"journal-article"},{"id":"pmid:18943906","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18943906","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.9208999872207642,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320309913","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W108485413","https://openalex.org/W1269312555","https://openalex.org/W1919772617","https://openalex.org/W1968908825","https://openalex.org/W1998019829","https://openalex.org/W1999344350","https://openalex.org/W2001206485","https://openalex.org/W2001685530","https://openalex.org/W2002532170","https://openalex.org/W2002682901","https://openalex.org/W2014322495","https://openalex.org/W2029721598","https://openalex.org/W2041707172","https://openalex.org/W2051337805","https://openalex.org/W2067620034","https://openalex.org/W2069133343","https://openalex.org/W2073608926","https://openalex.org/W2078561174","https://openalex.org/W2087583982","https://openalex.org/W2088583473","https://openalex.org/W2092613863","https://openalex.org/W2093339375","https://openalex.org/W2096009187","https://openalex.org/W2116098670","https://openalex.org/W2127276276","https://openalex.org/W2131681278","https://openalex.org/W2170093840","https://openalex.org/W2177555943","https://openalex.org/W2253414912","https://openalex.org/W2322348407"],"related_works":["https://openalex.org/W2069783617","https://openalex.org/W1551744725","https://openalex.org/W2028344239","https://openalex.org/W2056171848","https://openalex.org/W3097027433","https://openalex.org/W4225472042","https://openalex.org/W2337222712","https://openalex.org/W3167555011","https://openalex.org/W2007465037","https://openalex.org/W3158093140"],"abstract_inverted_index":{"ABSTRACT":[0],"Sclerotinia":[1],"sclerotiorum,":[2],"the":[3,18,25,29,36,40,44,49,66,87,103,108,133,143,203,231],"causal":[4],"agent":[5],"of":[6,21,24,28,48,62,80,86,102,112,118,135,170,186,211,217,234],"potato":[7,70,171,180,235],"stem":[8,236],"rot,":[9],"is":[10,238],"prevalent":[11],"and":[12,31,43,76,116,190,222],"poorly":[13],"managed":[14],"on":[15,179],"potatoes":[16],"in":[17,54,65,126,138,177,183,207,223,249],"Columbia":[19,37,67],"Basin":[20,68],"Washington.":[22],"Because":[23],"ubiquitous":[26],"nature":[27],"fungus":[30],"high":[32,157],"crop":[33],"diversity":[34,159,216],"within":[35,94],"Basin,":[38],"understanding":[39],"population":[41,60],"structure":[42,61],"potential":[45,123,204],"for":[46,124,205],"outcrossing":[47,125,206],"pathogen":[50],"would":[51],"be":[52],"helpful":[53],"developing":[55],"disease":[56],"management":[57,233],"strategies.":[58],"The":[59],"S.":[63],"sclerotiorum":[64],"from":[69,142],"was":[71,92,130],"examined":[72],"using":[73],"microsatellite":[74],"markers":[75],"mycelial":[77,153],"compatibility.":[78],"Analysis":[79],"molecular":[81],"variance":[82],"revealed":[83],"that":[84,230],"92%":[85],"variability":[88],"among":[89,197],"167":[90],"isolates":[91],"found":[93],"subpopulations,":[95],"with":[96,152],"limited,":[97],"yet":[98],"statistically":[99],"significant":[100,175,195],"impact":[101,164],"collection":[104],"date,":[105],"but":[106,246],"not":[107,150,161,240],"year":[109],"or":[110],"location":[111],"collection.":[113],"Linkage":[114],"disequilibrium":[115],"index":[117],"association":[119],"analyses":[120],"noted":[121],"a":[122,215],"two":[127],"locations,":[128],"which":[129],"substantiated":[131],"by":[132],"discovery":[134],"recombinant":[136],"ascospores":[137],"three":[139],"field-generated":[140],"apothecia":[141,145],"12":[144],"examined.":[146],"Microsatellite":[147],"haplotypes":[148],"were":[149],"correlated":[151],"compatibility":[154],"groups.":[155],"This":[156,226],"haplotypic":[158],"did":[160],"seem":[162],"to":[163,188,243,247],"pathologically":[165],"important":[166],"phenotypes.":[167],"Greenhouse":[168],"inoculations":[169],"plants":[172],"exhibited":[173],"no":[174,194],"differences":[176,196],"aggressiveness":[178],"stems.":[181],"Moreover,":[182],"vitro":[184],"studies":[185],"response":[187],"fungicides":[189],"temperature":[191],"stimuli":[192],"yielded":[193],"studied":[198],"isolates.":[199],"These":[200],"findings":[201],"illustrate":[202],"warm":[208],"temperate":[209],"regions":[210],"North":[212],"America,":[213],"where":[214],"crops":[218],"are":[219],"planted":[220],"simultaneously":[221],"neighboring":[224],"fields.":[225],"study":[227],"also":[228],"indicates":[229],"unsatisfactory":[232],"rot":[237],"likely":[239],"directly":[241],"attributable":[242],"genetic":[244],"factors,":[245],"gaps":[248],"agricultural":[250],"practices.":[251]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":11}],"updated_date":"2026-10-14T16:39:01.820549","created_date":"2016-06-24T00:00:00"}