{"id":"https://openalex.org/W2041007485","doi":"https://doi.org/10.1111/maec.12078","title":"Tandem repeat arrays in the mitochondrial genome as a tool for detecting genetic differences among the ark shell S capharca broughtonii","display_name":"Tandem repeat arrays in the mitochondrial genome as a tool for detecting genetic differences among the ark shell S capharca broughtonii","publication_year":2013,"publication_date":"2013-08-02","ids":{"openalex":"https://openalex.org/W2041007485","doi":"https://doi.org/10.1111/maec.12078","mag":"2041007485"},"language":"en","primary_location":{"id":"doi:10.1111/maec.12078","doi":"https://doi.org/10.1111/maec.12078","is_oa":false,"landing_page_url":"https://doi.org/10.1111/maec.12078","pdf_url":null,"source":{"id":"https://openalex.org/S170816358","display_name":"Marine Ecology","issn_l":"0173-9565","issn":["0173-9565","1439-0485"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Marine Ecology","raw_type":"journal-article"},"parent_works":[],"lineage":["https://openalex.org/W2041007485"],"child_works_count":0,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100369177","display_name":"Yun\u2010Guo Liu","orcid":"https://orcid.org/0000-0002-2118-6057","observed_orcids":["https://orcid.org/0000-0002-2118-6057"]},"institutions":[{"id":"https://openalex.org/I4210117686","display_name":"Japan Fisheries Research and Education Agency","ror":"https://ror.org/02gmwvg31","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210117686"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Yun\u2010Guo Liu","raw_affiliation_strings":["Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan","institution_ids":["https://openalex.org/I4210117686"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108260240","display_name":"Tadahide Kurokawa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210117686","display_name":"Japan Fisheries Research and Education Agency","ror":"https://ror.org/02gmwvg31","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210117686"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tadahide Kurokawa","raw_affiliation_strings":["Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan","institution_ids":["https://openalex.org/I4210117686"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071435176","display_name":"Masashi Sekino","orcid":"https://orcid.org/0000-0003-3603-8310","observed_orcids":["https://orcid.org/0000-0003-3603-8310"]},"institutions":[{"id":"https://openalex.org/I4210117686","display_name":"Japan Fisheries Research and Education Agency","ror":"https://ror.org/02gmwvg31","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210117686"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masashi Sekino","raw_affiliation_strings":["National Research Institute of Fisheries Science, Fisheries Research Agency, Yokohama, Kanagawa, Japan","Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Research Institute of Fisheries Science, Fisheries Research Agency, Yokohama, Kanagawa, Japan","institution_ids":["https://openalex.org/I4210117686"]},{"raw_affiliation_string":"Tohoku National Fisheries Research Institute, Fisheries Research Agency, Shiogama, Miyagi, Japan","institution_ids":["https://openalex.org/I4210117686"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019408377","display_name":"Toru Tanabe","orcid":"https://orcid.org/0000-0002-7686-9138","observed_orcids":["https://orcid.org/0000-0002-7686-9138"]},"institutions":[{"id":"https://openalex.org/I4405254900","display_name":"Miyagi Prefecture Fisheries Technology Institute","ror":"https://ror.org/02c9sby34","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405254900"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toru Tanabe","raw_affiliation_strings":["Miyagi Prefecture Fisheries Technology Institute, Ishinomaki, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Miyagi Prefecture Fisheries Technology Institute, Ishinomaki, Miyagi, Japan","institution_ids":["https://openalex.org/I4405254900"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050493845","display_name":"Kazuhito Watanabe","orcid":"https://orcid.org/0000-0002-3778-182X","observed_orcids":["https://orcid.org/0000-0002-3778-182X"]},"institutions":[{"id":"https://openalex.org/I4405254900","display_name":"Miyagi Prefecture Fisheries Technology Institute","ror":"https://ror.org/02c9sby34","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4405254900"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuhito Watanabe","raw_affiliation_strings":["Miyagi Prefecture Fisheries Technology Institute, Ishinomaki, Miyagi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Miyagi Prefecture Fisheries Technology Institute, Ishinomaki, Miyagi, Japan","institution_ids":["https://openalex.org/I4405254900"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5100369177"],"corresponding_institution_ids":["https://openalex.org/I4210117686"],"apc_list":{"value":3560,"currency":"USD","value_usd":3560},"apc_paid":null,"fwci":0.3087,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.53829504,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":93},"biblio":{"volume":"35","issue":"3","first_page":"273","last_page":"280"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10765","display_name":"Marine Biology and Ecology Research","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11088","display_name":"Marine Bivalve and Aquaculture Studies","score":0.0026000000070780516,"subfield":{"id":"https://openalex.org/subfields/1104","display_name":"Aquatic Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scapharca-broughtonii","display_name":"Scapharca broughtonii","score":0.9419999718666077},{"id":"https://openalex.org/keywords/arcidae","display_name":"Arcidae","score":0.8889999985694885},{"id":"https://openalex.org/keywords/mitochondrial-genome","display_name":"mitochondrial genome","score":0.8029999732971191},{"id":"https://openalex.org/keywords/tandem-repeat-arrays","display_name":"tandem repeat arrays","score":0.9660000205039978},{"id":"https://openalex.org/keywords/genetic-differentiation","display_name":"genetic differentiation","score":0.6850000023841858},{"id":"https://openalex.org/keywords/haplotype-diversity","display_name":"haplotype diversity","score":0.8379999995231628},{"id":"https://openalex.org/keywords/nucleotide-diversity","display_name":"nucleotide diversity","score":0.8640000224113464},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.7509999871253967},{"id":"https://openalex.org/keywords/bivalve-genetics","display_name":"bivalve genetics","score":0.4950000047683716},{"id":"https://openalex.org/keywords/east-asian-populations","display_name":"East Asian populations","score":0.574999988079071}],"concepts":[{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.8487608432769775},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6547694802284241},{"id":"https://openalex.org/C172312944","wikidata":"https://www.wikidata.org/wiki/Q1957903","display_name":"Dendrogram","level":4,"score":0.5883249640464783},{"id":"https://openalex.org/C26589402","wikidata":"https://www.wikidata.org/wiki/Q7068267","display_name":"Nucleotide diversity","level":5,"score":0.5812482833862305},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.5692341923713684},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5644457340240479},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5368638038635254},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.5139889121055603},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48896563053131104},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3685382008552551},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.14682221412658691},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1463240087032318},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1111/maec.12078","doi":"https://doi.org/10.1111/maec.12078","is_oa":false,"landing_page_url":"https://doi.org/10.1111/maec.12078","pdf_url":null,"source":{"id":"https://openalex.org/S170816358","display_name":"Marine Ecology","issn_l":"0173-9565","issn":["0173-9565","1439-0485"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Marine Ecology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322266","display_name":"Ministry of Agriculture, Forestry and Fisheries","ror":"https://ror.org/02zdz1m23"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W93588716","https://openalex.org/W214929744","https://openalex.org/W1525734744","https://openalex.org/W1908731954","https://openalex.org/W1965499346","https://openalex.org/W1967936634","https://openalex.org/W1993768980","https://openalex.org/W2008744741","https://openalex.org/W2057894845","https://openalex.org/W2092758526","https://openalex.org/W2094529993","https://openalex.org/W2096773038","https://openalex.org/W2097382368","https://openalex.org/W2127679925","https://openalex.org/W2132632499","https://openalex.org/W2155053516","https://openalex.org/W2158380961","https://openalex.org/W2161509142","https://openalex.org/W2170964526","https://openalex.org/W2563170921"],"related_works":["https://openalex.org/W1967936634","https://openalex.org/W2516576700","https://openalex.org/W1990308445","https://openalex.org/W3145133641","https://openalex.org/W2098211776","https://openalex.org/W2092758526","https://openalex.org/W2364330685","https://openalex.org/W2181800006","https://openalex.org/W1500197820"],"abstract_inverted_index":{"Abstract":[0],"We":[1],"found":[2],"that":[3,122],"tandem":[4,94],"repeat":[5,95],"(TR)":[6],"arrays":[7],"were":[8,64,67],"present":[9],"in":[10,127],"the":[11,21,32,44,74,90,99,111,123,141,166,172],"ark":[12,124],"shell":[13,125],"Scapharca":[14],"broughtonii":[15],"mitochondrial":[16],"genome,":[17],"and":[18,48,81,103,129,155,169,175],"we":[19],"demonstrated":[20],"efficiency":[22],"of":[23,34,93,139],"using":[24],"this":[25],"TR":[26,52,113],"region":[27],"as":[28,66,149],"a":[29,136,179],"tool":[30],"for":[31],"detection":[33],"genetic":[35],"differentiation.":[36],"In":[37],"samples":[38,76,100,151,156],"collected":[39],"from":[40,57,77,101,108],"seven":[41],"populations":[42,126,177,184],"off":[43],"Japanese,":[45],"Chinese,":[46,173],"Russian":[47,174],"Korean":[49,142,176],"coasts,":[50],"five":[51],"types":[53],"with":[54,152,157],"length":[55],"ranging":[56],"481":[58],"to":[59],"601":[60],"bp":[61],"(base":[62],"pairs)":[63],"found,":[65],"18":[68],"haplotypes":[69,158],"(n":[70],"=":[71],"155).":[72],"All":[73,98],"Japanese":[75,183],"SD,":[78],"IK,":[79],"AM":[80],"KG,":[82],"which":[83],"represented":[84],"four":[85],"geographically":[86],"distinct":[87],"populations,":[88],"had":[89,110],"same":[91,112],"type":[92],"array,":[96],"481\u2010TR.":[97],"China":[102,128],"all":[104],"but":[105],"one":[106],"sample":[107],"Russia":[109,130],"type,":[114],"511\u2010TR;":[115],"these":[116],"finding":[117],"may":[118],"be":[119],"strong":[120],"evidence":[121],"are":[131],"very":[132],"similar.":[133],"Based":[134,164],"on":[135,165],"neighbor\u2010joining":[137],"dendrogram":[138],"haplotypes,":[140],"population":[143],"was":[144],"divided":[145],"into":[146],"two":[147],"groups":[148],"follows:":[150],"haplotype":[153,167],"H481\u20103":[154],"H601\u20101,":[159],"H601\u20102,":[160],"H601\u20103":[161],"or":[162],"H541\u20101.":[163],"diversity":[168,181],"nucleotide":[170],"diversity,":[171],"showed":[178],"higher":[180],"than":[182],"(P":[185],"<":[186],"0.05).":[187]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-14T11:04:58.165337","created_date":"2016-06-24T00:00:00"}
