{"id":"https://openalex.org/W2037512677","doi":"https://doi.org/10.1016/j.mimet.2009.06.001","title":"Quantitative improvement of 16S rDNA DGGE analysis for soil bacterial community using real-time PCR","display_name":"Quantitative improvement of 16S rDNA DGGE analysis for soil bacterial community using real-time PCR","publication_year":2009,"publication_date":"2009-06-12","ids":{"openalex":"https://openalex.org/W2037512677","doi":"https://doi.org/10.1016/j.mimet.2009.06.001","mag":"2037512677","pmid":"https://pubmed.ncbi.nlm.nih.gov/19523498"},"language":"en","primary_location":{"id":"doi:10.1016/j.mimet.2009.06.001","doi":"https://doi.org/10.1016/j.mimet.2009.06.001","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.mimet.2009.06.001","pdf_url":null,"source":{"id":"https://openalex.org/S24124513","display_name":"Journal of Microbiological Methods","issn_l":"0167-7012","issn":["0167-7012","1872-8359"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Microbiological Methods","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002945277","display_name":"Jae-Hyung Ahn","orcid":"https://orcid.org/0000-0002-7250-4959","observed_orcids":["https://orcid.org/0000-0002-7250-4959"]},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jae-Hyung Ahn","raw_affiliation_strings":["Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072765051","display_name":"Yoo-Jeong Kim","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Yoo-Jeong Kim","raw_affiliation_strings":["Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100643808","display_name":"Tae-Sung Kim","orcid":"https://orcid.org/0000-0002-4976-6459","observed_orcids":["https://orcid.org/0000-0002-4976-6459"]},"institutions":[{"id":"https://openalex.org/I64946176","display_name":"National Institute of Environmental Research","ror":"https://ror.org/02xhmzq41","country_code":"KR","type":"government","lineage":["https://openalex.org/I64946176"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Taesung Kim","raw_affiliation_strings":["Biosafety Research Division, Ecology Research Department, National Institute of Environmental Research, Incheon 404-708, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biosafety Research Division, Ecology Research Department, National Institute of Environmental Research, Incheon 404-708, Republic of Korea","institution_ids":["https://openalex.org/I64946176"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102140150","display_name":"Hong-Gyu Song","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I165507594","display_name":"Kangwon National University","ror":"https://ror.org/01mh5ph17","country_code":"KR","type":"education","lineage":["https://openalex.org/I165507594"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hong-Gyu Song","raw_affiliation_strings":["Division of Biological Sciences, Kangwon National University, Chuncheon 200-701, Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biological Sciences, Kangwon National University, Chuncheon 200-701, Republic of Korea","institution_ids":["https://openalex.org/I165507594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071667418","display_name":"ChulHee Kang","orcid":"https://orcid.org/0000-0002-0693-7860","observed_orcids":["https://orcid.org/0000-0002-0693-7860"]},"institutions":[{"id":"https://openalex.org/I72951846","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17","country_code":"US","type":"education","lineage":["https://openalex.org/I72951846"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"ChulHee Kang","raw_affiliation_strings":["School of Molecular Biosciences, Washington State University, Pullman, WA 99164, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Molecular Biosciences, Washington State University, Pullman, WA 99164, USA","institution_ids":["https://openalex.org/I72951846"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080435351","display_name":"Jong-Ok Ka","orcid":"https://orcid.org/0000-0002-8213-1500","observed_orcids":["https://orcid.org/0000-0002-8213-1500"]},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jong-Ok Ka","raw_affiliation_strings":["Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Agricultural Biotechnology, Seoul National University, Seoul 151-742, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Dept. of Agricultural Biotechnology; Seoul National University; Seoul 151-742 Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5080435351"],"corresponding_institution_ids":["https://openalex.org/I139264467"],"apc_list":{"value":3120,"currency":"USD","value_usd":3120},"apc_paid":null,"fwci":2.3292,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.8624474,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"78","issue":"2","first_page":"216","last_page":"222"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.0032999999821186066,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.0019000000320374966,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/16s-rrna-gene","display_name":"16S rRNA gene","score":0.9309999942779541},{"id":"https://openalex.org/keywords/denaturing-gradient-gel-electrophoresis","display_name":"denaturing gradient gel electrophoresis","score":0.9700000286102295},{"id":"https://openalex.org/keywords/soil-bacterial-communities","display_name":"soil bacterial communities","score":0.9430000185966492},{"id":"https://openalex.org/keywords/real-time-pcr-quantification","display_name":"real-time PCR quantification","score":0.8370000123977661},{"id":"https://openalex.org/keywords/primer-mismatch","display_name":"primer mismatch","score":0.5759999752044678},{"id":"https://openalex.org/keywords/dntp-concentration","display_name":"dNTP concentration","score":0.8190000057220459},{"id":"https://openalex.org/keywords/dna-secondary-structure","display_name":"DNA secondary structure","score":0.5920000076293945}],"concepts":[{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.722200870513916},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6905816793441772},{"id":"https://openalex.org/C198549448","wikidata":"https://www.wikidata.org/wiki/Q857463","display_name":"Temperature gradient gel electrophoresis","level":4,"score":0.6596983075141907},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.5800955891609192},{"id":"https://openalex.org/C2777563447","wikidata":"https://www.wikidata.org/wiki/Q7243397","display_name":"Primer (cosmetics)","level":2,"score":0.5327408909797668},{"id":"https://openalex.org/C207812311","wikidata":"https://www.wikidata.org/wiki/Q426560","display_name":"Ribosomal DNA","level":4,"score":0.501126766204834},{"id":"https://openalex.org/C84133368","wikidata":"https://www.wikidata.org/wiki/Q6813768","display_name":"Melting curve analysis","level":4,"score":0.4762187898159027},{"id":"https://openalex.org/C48023723","wikidata":"https://www.wikidata.org/wiki/Q856198","display_name":"Real-time polymerase chain reaction","level":3,"score":0.4620342552661896},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.41983866691589355},{"id":"https://openalex.org/C31903555","wikidata":"https://www.wikidata.org/wiki/Q1637030","display_name":"Food science","level":1,"score":0.38221192359924316},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.32623183727264404},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2926517724990845},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.23825562000274658},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.21863174438476562},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.14945679903030396},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004275","descriptor_name":"DNA, Ribosomal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004591","descriptor_name":"Electrophoresis, Polyacrylamide Gel","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009691","descriptor_name":"Nucleic Acid Denaturation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012988","descriptor_name":"Soil Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044822","descriptor_name":"Biodiversity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/j.mimet.2009.06.001","doi":"https://doi.org/10.1016/j.mimet.2009.06.001","is_oa":false,"landing_page_url":"https://doi.org/10.1016/j.mimet.2009.06.001","pdf_url":null,"source":{"id":"https://openalex.org/S24124513","display_name":"Journal of Microbiological Methods","issn_l":"0167-7012","issn":["0167-7012","1872-8359"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-d","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Microbiological Methods","raw_type":"journal-article"},{"id":"pmid:19523498","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19523498","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of microbiological methods","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322035","display_name":"Rural Development Administration","ror":"https://ror.org/03xs9yg50"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1576596365","https://openalex.org/W1914747677","https://openalex.org/W1941909431","https://openalex.org/W2005122356","https://openalex.org/W2021225519","https://openalex.org/W2030610430","https://openalex.org/W2034428861","https://openalex.org/W2053090704","https://openalex.org/W2064504648","https://openalex.org/W2067253355","https://openalex.org/W2079446230","https://openalex.org/W2083121396","https://openalex.org/W2095799171","https://openalex.org/W2096917307","https://openalex.org/W2104990098","https://openalex.org/W2107594154","https://openalex.org/W2126110155","https://openalex.org/W2127457293","https://openalex.org/W2127771872","https://openalex.org/W2147923790","https://openalex.org/W2156465688","https://openalex.org/W2162578061","https://openalex.org/W2170638721","https://openalex.org/W2406405244","https://openalex.org/W2804007336"],"related_works":["https://openalex.org/W2525953770","https://openalex.org/W1914747677","https://openalex.org/W2101064410","https://openalex.org/W1582659504","https://openalex.org/W2371255191","https://openalex.org/W1997274642","https://openalex.org/W1988111723","https://openalex.org/W1989908159","https://openalex.org/W2387471689","https://openalex.org/W2663849946"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
