{"id":"https://openalex.org/W2030640333","doi":"https://doi.org/10.1038/ismej.2013.131","title":"Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont","display_name":"Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont","publication_year":2013,"publication_date":"2013-08-08","ids":{"openalex":"https://openalex.org/W2030640333","doi":"https://doi.org/10.1038/ismej.2013.131","mag":"2030640333","pmid":"https://pubmed.ncbi.nlm.nih.gov/23924784","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3869010"},"language":"en","primary_location":{"id":"doi:10.1038/ismej.2013.131","doi":"https://doi.org/10.1038/ismej.2013.131","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2013.131","pdf_url":"https://www.nature.com/articles/ismej2013131.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://www.nature.com/articles/ismej2013131.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046865187","display_name":"Satoshi Nakagawa","orcid":"https://orcid.org/0000-0003-0215-8154","observed_orcids":["https://orcid.org/0000-0003-0215-8154"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]},{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Satoshi Nakagawa","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]},{"raw_affiliation_string":"Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002500957","display_name":"Shigeru Shimamura","orcid":"https://orcid.org/0000-0002-5580-962X","observed_orcids":["https://orcid.org/0000-0002-5580-962X"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shigeru Shimamura","raw_affiliation_strings":["Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078634530","display_name":"Yoshihiro Takaki","orcid":"https://orcid.org/0000-0002-1247-4946","observed_orcids":["https://orcid.org/0000-0002-1247-4946"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yoshihiro Takaki","raw_affiliation_strings":["Cooperative Research Project for Extremophiles, Institute of Biogeosciences, JAMSTEC , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cooperative Research Project for Extremophiles, Institute of Biogeosciences, JAMSTEC , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075842667","display_name":"Yohey Suzuki","orcid":"https://orcid.org/0000-0001-7872-9289","observed_orcids":["https://orcid.org/0000-0001-7872-9289"]},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yohey Suzuki","raw_affiliation_strings":["Department of Earth and Planetary Science, Graduate School of Science, University of Tokyo , Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Earth and Planetary Science, Graduate School of Science, University of Tokyo , Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shun-ichi Murakami","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shun-ichi Murakami","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108081831","display_name":"Tamaki Watanabe","orcid":"https://orcid.org/0000-0002-6871-1090","observed_orcids":["https://orcid.org/0000-0002-6871-1090","https://orcid.org/0000-0003-0985-5497"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tamaki Watanabe","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063400013","display_name":"So Fujiyoshi","orcid":"https://orcid.org/0000-0003-4306-332X","observed_orcids":["https://orcid.org/0000-0003-4306-332X"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"So Fujiyoshi","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031655359","display_name":"Sayaka Mino","orcid":"https://orcid.org/0000-0003-2151-9795","observed_orcids":["https://orcid.org/0000-0003-2151-9795"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Sayaka Mino","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053534793","display_name":"Tomoo Sawabe","orcid":"https://orcid.org/0000-0002-6013-2369","observed_orcids":["https://orcid.org/0000-0002-6013-2369"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tomoo Sawabe","raw_affiliation_strings":["Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University , Hakodate, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035237919","display_name":"Takahiro Maeda","orcid":"https://orcid.org/0000-0003-4530-6460","observed_orcids":["https://orcid.org/0000-0003-4530-6460"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]},{"id":"https://openalex.org/I4210109111","display_name":"Amino Up (Japan)","ror":"https://ror.org/015999a88","country_code":"JP","type":"company","lineage":["https://openalex.org/I4210109111"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takahiro Maeda","raw_affiliation_strings":["Amino Up Chemical Company , Sapporo, Japan","Laboratory of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University , Sapporo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Amino Up Chemical Company , Sapporo, Japan","institution_ids":["https://openalex.org/I4210109111"]},{"raw_affiliation_string":"Laboratory of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University , Sapporo, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083040273","display_name":"Hiroko Makita","orcid":"https://orcid.org/0000-0002-9547-8351","observed_orcids":["https://orcid.org/0000-0002-9547-8351"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroko Makita","raw_affiliation_strings":["Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066681991","display_name":"Suguru Nemoto","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210122717","display_name":"Enoshima Aquarium","ror":"https://ror.org/02rv73z09","country_code":"JP","type":"other","lineage":["https://openalex.org/I4210122717"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Suguru Nemoto","raw_affiliation_strings":["Enoshima Aquarium , Fujisawa, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Enoshima Aquarium , Fujisawa, Japan","institution_ids":["https://openalex.org/I4210122717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074428939","display_name":"Shin\u2010Ichiro Nishimura","orcid":"https://orcid.org/0000-0002-6608-8418","observed_orcids":["https://orcid.org/0000-0002-6608-8418"]},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shin-Ichiro Nishimura","raw_affiliation_strings":["Laboratory of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University , Sapporo, Japan","Medicinal Chemistry Pharmaceuticals, Co. Ltd. , Sapporo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Advanced Chemical Biology, Graduate School of Life Science, Hokkaido University , Sapporo, Japan","institution_ids":["https://openalex.org/I205349734"]},{"raw_affiliation_string":"Medicinal Chemistry Pharmaceuticals, Co. Ltd. , Sapporo, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028871135","display_name":"Hiromi Watanabe","orcid":"https://orcid.org/0000-0001-5031-9018","observed_orcids":["https://orcid.org/0000-0001-5031-9018"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiromi Watanabe","raw_affiliation_strings":["Marine Biodiversity Research Program, JAMSTEC , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marine Biodiversity Research Program, JAMSTEC , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080798614","display_name":"Tomo\u2010o Watsuji","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tomo-o Watsuji","raw_affiliation_strings":["Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035076319","display_name":"Ken Takai","orcid":"https://orcid.org/0000-0003-4043-376X","observed_orcids":["https://orcid.org/0000-0003-4043-376X"]},"institutions":[{"id":"https://openalex.org/I1315852903","display_name":"Japan Agency for Marine-Earth Science and Technology","ror":"https://ror.org/059qg2m13","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1315852903"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ken Takai","raw_affiliation_strings":["Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Subsurface Geobiology Advanced Research (SUGAR) Project, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC) , Yokosuka, Japan","institution_ids":["https://openalex.org/I1315852903"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5046865187"],"corresponding_institution_ids":["https://openalex.org/I1315852903","https://openalex.org/I205349734"],"apc_list":{"value":3675,"currency":"EUR","value_usd":4153},"apc_paid":null,"fwci":6.2177,"has_fulltext":true,"cited_by_count":76,"citation_normalized_percentile":{"value":0.96814001,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"8","issue":"1","first_page":"40","last_page":"51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.4235999882221222,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.4235999882221222,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12134","display_name":"Insect symbiosis and bacterial influences","score":0.13449999690055847,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.11739999800920486,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/endosymbiont-genome","display_name":"endosymbiont genome","score":0.8240000009536743},{"id":"https://openalex.org/keywords/gammaproteobacteria","display_name":"Gammaproteobacteria","score":0.9290000200271606},{"id":"https://openalex.org/keywords/deep-sea-hydrothermal-vents","display_name":"deep-sea hydrothermal vents","score":0.7710000276565552},{"id":"https://openalex.org/keywords/chemoautotrophy","display_name":"chemoautotrophy","score":0.8690000176429749},{"id":"https://openalex.org/keywords/sulfur-oxidation","display_name":"sulfur oxidation","score":0.8769999742507935},{"id":"https://openalex.org/keywords/co2-fixation","display_name":"CO2 fixation","score":0.8370000123977661},{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":0.9879999756813049},{"id":"https://openalex.org/keywords/genome-reduction","display_name":"genome reduction","score":0.7139999866485596},{"id":"https://openalex.org/keywords/pseudogenes","display_name":"pseudogenes","score":0.9449999928474426},{"id":"https://openalex.org/keywords/insertion-elements","display_name":"insertion elements","score":0.8199999928474426},{"id":"https://openalex.org/keywords/host-symbiont-association","display_name":"host-symbiont association","score":0.8140000104904175}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.973952054977417},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.8019788265228271},{"id":"https://openalex.org/C34957205","wikidata":"https://www.wikidata.org/wiki/Q277338","display_name":"Pseudogene","level":4,"score":0.7211379408836365},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.534903883934021},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4718492031097412},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.45142853260040283},{"id":"https://openalex.org/C174600577","wikidata":"https://www.wikidata.org/wiki/Q5533491","display_name":"Genome evolution","level":4,"score":0.43100452423095703},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.42183881998062134},{"id":"https://openalex.org/C2778172128","wikidata":"https://www.wikidata.org/wiki/Q2878491","display_name":"Symbiotic bacteria","level":4,"score":0.4207957684993744},{"id":"https://openalex.org/C43144210","wikidata":"https://www.wikidata.org/wiki/Q121610","display_name":"Symbiosis","level":3,"score":0.3749840259552002},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2791183292865753},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002247","descriptor_name":"Carbon Isotopes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005407","descriptor_name":"Flagella","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012908","descriptor_name":"Snails","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D013559","descriptor_name":"Symbiosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D060086","descriptor_name":"Hydrothermal Vents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1038/ismej.2013.131","doi":"https://doi.org/10.1038/ismej.2013.131","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2013.131","pdf_url":"https://www.nature.com/articles/ismej2013131.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:3245850","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3869010","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3869010","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3869010","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISME J","raw_type":"Text"},{"id":"pmid:23924784","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23924784","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME journal","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1038/ismej.2013.131","doi":"https://doi.org/10.1038/ismej.2013.131","is_oa":true,"landing_page_url":"https://doi.org/10.1038/ismej.2013.131","pdf_url":"https://www.nature.com/articles/ismej2013131.pdf","source":{"id":"https://openalex.org/S149218730","display_name":"The ISME Journal","issn_l":"1751-7362","issn":["1751-7362","1751-7370"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The ISME Journal","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G4209303516","display_name":"Molecular understanding of host-symbiont interaction in deep-sea hydrothermal fields.","funder_award_id":"23687004","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6419347838","display_name":"Strategic isolation culture of ectosymbiotic methanotroph by engineering innovation","funder_award_id":"25840166","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6983286217","display_name":null,"funder_award_id":"20109005","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2030640333.pdf","grobid_xml":"https://content.openalex.org/works/W2030640333.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W1493874478","https://openalex.org/W1565152114","https://openalex.org/W1665726872","https://openalex.org/W1815116469","https://openalex.org/W1963555877","https://openalex.org/W1965032858","https://openalex.org/W1966802143","https://openalex.org/W1968179480","https://openalex.org/W1970034377","https://openalex.org/W1975993887","https://openalex.org/W1978164115","https://openalex.org/W1983447033","https://openalex.org/W1984375007","https://openalex.org/W1990004173","https://openalex.org/W1990148665","https://openalex.org/W2007943710","https://openalex.org/W2014848186","https://openalex.org/W2016896717","https://openalex.org/W2017833395","https://openalex.org/W2024709479","https://openalex.org/W2026611778","https://openalex.org/W2032870665","https://openalex.org/W2038345364","https://openalex.org/W2048052835","https://openalex.org/W2057603597","https://openalex.org/W2062941070","https://openalex.org/W2066294319","https://openalex.org/W2070580275","https://openalex.org/W2071194949","https://openalex.org/W2074668828","https://openalex.org/W2086350928","https://openalex.org/W2089916857","https://openalex.org/W2092023088","https://openalex.org/W2097591653","https://openalex.org/W2099054526","https://openalex.org/W2099416314","https://openalex.org/W2100018338","https://openalex.org/W2100196601","https://openalex.org/W2101249646","https://openalex.org/W2106773811","https://openalex.org/W2112884978","https://openalex.org/W2113357218","https://openalex.org/W2117919289","https://openalex.org/W2122447210","https://openalex.org/W2122594388","https://openalex.org/W2126346475","https://openalex.org/W2127318693","https://openalex.org/W2127933185","https://openalex.org/W2128601422","https://openalex.org/W2129232972","https://openalex.org/W2133790733","https://openalex.org/W2138304037","https://openalex.org/W2144572303","https://openalex.org/W2145103337","https://openalex.org/W2148622452","https://openalex.org/W2149429041","https://openalex.org/W2152248833","https://openalex.org/W2157356145","https://openalex.org/W2158198598","https://openalex.org/W2158714788","https://openalex.org/W2160144180","https://openalex.org/W2160414617","https://openalex.org/W2161854685","https://openalex.org/W2163066505","https://openalex.org/W2167188257","https://openalex.org/W4211043672","https://openalex.org/W4230392683"],"related_works":["https://openalex.org/W4292723010","https://openalex.org/W2124311433","https://openalex.org/W4283011420","https://openalex.org/W4289222971","https://openalex.org/W3041823446","https://openalex.org/W3087406471","https://openalex.org/W2043220076","https://openalex.org/W2139754665","https://openalex.org/W3084834257","https://openalex.org/W4379744924"],"abstract_inverted_index":{"Deep-sea":[0],"vents":[1],"harbor":[2],"dense":[3],"populations":[4],"of":[5,25,43,55,72,129,146,205,217],"various":[6],"animals":[7],"that":[8,112,189],"have":[9,28],"their":[10,33,44],"specific":[11],"symbiotic":[12],"bacteria.":[13,121],"Scaly-foot":[14],"gastropods,":[15],"which":[16,135],"are":[17,137],"snails":[18],"with":[19,64],"mineralized":[20],"scales":[21],"covering":[22],"the":[23,41,51,100,125,143,190,197,202,212],"sides":[24],"its":[26],"foot,":[27],"a":[29,174,229],"gammaproteobacterial":[30,56],"endosymbiont":[31,59,101,219],"in":[32,83,158,165,185,201,228],"enlarged":[34],"esophageal":[35],"glands":[36],"and":[37,74,91,127,220],"diverse":[38],"epibionts":[39],"on":[40],"surface":[42],"scales.":[45],"In":[46],"this":[47],"study,":[48],"we":[49],"report":[50],"complete":[52,214],"genome":[53,60,66,78,104,215,226],"sequencing":[54],"endosymbiont.":[57,232],"The":[58,77,103,180],"displays":[61],"features":[62],"consistent":[63],"ongoing":[65],"reduction":[67],"such":[68,87],"as":[69,88],"large":[70],"proportions":[71],"pseudogenes":[73],"insertion":[75],"elements.":[76],"encodes":[79],"functions":[80],"commonly":[81],"found":[82],"deep-sea":[84],"vent":[85],"chemoautotrophs":[86],"sulfur":[89],"oxidation":[90],"carbon":[92,95],"fixation.":[93],"Stable":[94],"isotope":[96],"((13)C)-labeling":[97],"experiments":[98],"confirmed":[99],"chemoautotrophy.":[102],"also":[105],"includes":[106],"an":[107,222],"intact":[108],"hydrogenase":[109],"gene":[110],"cluster":[111],"potentially":[113,138],"has":[114],"been":[115],"horizontally":[116,206],"transferred":[117],"from":[118,140,173],"phylogenetically":[119],"distant":[120],"Notable":[122],"findings":[123],"include":[124],"presence":[126],"transcription":[128],"genes":[130,161],"for":[131,168],"flagellar":[132],"assembly,":[133],"through":[134],"proteins":[136],"exported":[139],"bacterium":[141],"to":[142,224],"host.":[144],"Symbionts":[145],"snail":[147],"individuals":[148],"exhibited":[149],"extreme":[150],"genetic":[151,183,199],"homogeneity,":[152],"showing":[153],"only":[154],"two":[155],"synonymous":[156],"changes":[157],"19":[159],"different":[160],"(13":[162],"810":[163],"positions":[164],"total)":[166],"determined":[167],"32":[169],"individual":[170],"gastropods":[171],"collected":[172],"single":[175],"colony":[176],"at":[177],"one":[178],"time.":[179],"extremely":[181],"low":[182],"individuality":[184],"endosymbionts":[186],"probably":[187],"reflects":[188],"stringent":[191],"symbiont":[192],"selection":[193],"by":[194],"host":[195],"prevents":[196],"random":[198],"drift":[200],"small":[203],"population":[204],"transmitted":[207],"symbiont.":[208],"This":[209],"study":[210,225],"is":[211],"first":[213],"analysis":[216],"gastropod":[218],"offers":[221],"opportunity":[223],"evolution":[227],"recently":[230],"evolved":[231]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":12},{"year":2014,"cited_by_count":6}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
