{"id":"https://openalex.org/W2026309161","doi":"https://doi.org/10.1002/dvdy.21623","title":"Gene nomenclature guidelines for the planarian Schmidtea mediterranea","display_name":"Gene nomenclature guidelines for the planarian Schmidtea mediterranea","publication_year":2008,"publication_date":"2008-07-15","ids":{"openalex":"https://openalex.org/W2026309161","doi":"https://doi.org/10.1002/dvdy.21623","mag":"2026309161","pmid":"https://pubmed.ncbi.nlm.nih.gov/18627099"},"language":"en","primary_location":{"id":"doi:10.1002/dvdy.21623","doi":"https://doi.org/10.1002/dvdy.21623","is_oa":false,"landing_page_url":"https://doi.org/10.1002/dvdy.21623","pdf_url":null,"source":{"id":"https://openalex.org/S104993753","display_name":"Developmental Dynamics","issn_l":"1058-8388","issn":["1058-8388","1097-0177"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Developmental Dynamics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011162507","display_name":"Peter W. Reddien","orcid":"https://orcid.org/0000-0002-5569-333X","observed_orcids":["https://orcid.org/0000-0002-5569-333X"]},"institutions":[{"id":"https://openalex.org/I4210157710","display_name":"Whitehead Institute for Biomedical Research","ror":"https://ror.org/04vqm6w82","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210157710","https://openalex.org/I63966007"]},{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter W. Reddien","raw_affiliation_strings":["Whitehead Institute for Biomedical Research, MIT Department of Biology, Cambridge, Massachusetts, USA","Whitehead Institute for Biomedical Research, MIT Department of Biology, Cambridge, Massachusetts"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Whitehead Institute for Biomedical Research, MIT Department of Biology, Cambridge, Massachusetts, USA","institution_ids":["https://openalex.org/I4210157710","https://openalex.org/I63966007"]},{"raw_affiliation_string":"Whitehead Institute for Biomedical Research, MIT Department of Biology, Cambridge, Massachusetts","institution_ids":["https://openalex.org/I4210157710","https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043948579","display_name":"Phillip A. Newmark","orcid":"https://orcid.org/0000-0003-0793-022X","observed_orcids":["https://orcid.org/0000-0003-0793-022X"]},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Phillip A. Newmark","raw_affiliation_strings":["Department of Cell and Developmental Biology, Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, Illinois"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cell and Developmental Biology, Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, Illinois","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061204199","display_name":"Alejandro S\u00e1nchez Alvarado","orcid":"https://orcid.org/0000-0002-1966-6959","observed_orcids":["https://orcid.org/0000-0002-1966-6959"]},"institutions":[{"id":"https://openalex.org/I1344073410","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90","country_code":"US","type":"facility","lineage":["https://openalex.org/I1344073410"]},{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alejandro S\u00e1nchez Alvarado","raw_affiliation_strings":["Department of Neurobiology and Anatomy, Howard Hughes Medical Institute, University of Utah School of Medicine, Salt Lake City, Utah"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurobiology and Anatomy, Howard Hughes Medical Institute, University of Utah School of Medicine, Salt Lake City, Utah","institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5061204199"],"corresponding_institution_ids":["https://openalex.org/I1344073410","https://openalex.org/I223532165"],"apc_list":{"value":4430,"currency":"USD","value_usd":4430},"apc_paid":null,"fwci":0.5604,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.59462095,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":97},"biblio":{"volume":"237","issue":"11","first_page":"3099","last_page":"3101"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12789","display_name":"Planarian Biology and Electrostimulation","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12789","display_name":"Planarian Biology and Electrostimulation","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10268","display_name":"Developmental Biology and Gene Regulation","score":0.0006000000284984708,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-nomenclature","display_name":"gene nomenclature","score":0.9449999928474426},{"id":"https://openalex.org/keywords/schmidtea-mediterranea","display_name":"Schmidtea mediterranea","score":0.9929999709129333},{"id":"https://openalex.org/keywords/tricladida","display_name":"Tricladida","score":0.7440000176429749},{"id":"https://openalex.org/keywords/gene-naming-conventions","display_name":"gene naming conventions","score":0.8009999990463257},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.7620000243186951},{"id":"https://openalex.org/keywords/freshwater-planarians","display_name":"freshwater planarians","score":0.5410000085830688}],"concepts":[{"id":"https://openalex.org/C2775935104","wikidata":"https://www.wikidata.org/wiki/Q6502673","display_name":"Planarian","level":3,"score":0.9915587902069092},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9021613597869873},{"id":"https://openalex.org/C2777113906","wikidata":"https://www.wikidata.org/wiki/Q2855014","display_name":"Planaria","level":3,"score":0.758230984210968},{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.7209121584892273},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6232835054397583},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.582528829574585},{"id":"https://openalex.org/C62177273","wikidata":"https://www.wikidata.org/wiki/Q5531556","display_name":"Gene nomenclature","level":4,"score":0.5689128637313843},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5127543210983276},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.458514928817749},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4352352023124695},{"id":"https://openalex.org/C171056886","wikidata":"https://www.wikidata.org/wiki/Q193119","display_name":"Regeneration (biology)","level":2,"score":0.2704409062862396},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.26732540130615234},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.20959222316741943},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.07861092686653137}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010932","descriptor_name":"Planarians","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015801","descriptor_name":"Helminth Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D015801","descriptor_name":"Helminth Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017238","descriptor_name":"Genes, Helminth","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1002/dvdy.21623","doi":"https://doi.org/10.1002/dvdy.21623","is_oa":false,"landing_page_url":"https://doi.org/10.1002/dvdy.21623","pdf_url":null,"source":{"id":"https://openalex.org/S104993753","display_name":"Developmental Dynamics","issn_l":"1058-8388","issn":["1058-8388","1097-0177"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Developmental Dynamics","raw_type":"journal-article"},{"id":"pmid:18627099","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18627099","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Developmental dynamics : an official publication of the American Association of Anatomists","raw_type":"Guideline"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G9000883582","display_name":"Germ cell specification and differentiation in planarians","funder_award_id":"R01HD043403","funder_id":"https://openalex.org/F4320337611","funder_display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development"}],"funders":[{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1605923556","https://openalex.org/W1971481058","https://openalex.org/W1972752128","https://openalex.org/W1986260964","https://openalex.org/W1990750863","https://openalex.org/W2023719014","https://openalex.org/W2045050359","https://openalex.org/W2050902903","https://openalex.org/W2066972948","https://openalex.org/W2072572526","https://openalex.org/W2074658822","https://openalex.org/W2084288930","https://openalex.org/W2096285464","https://openalex.org/W2105312191","https://openalex.org/W2111086936","https://openalex.org/W2134880341","https://openalex.org/W2136399909","https://openalex.org/W2146557306","https://openalex.org/W2150465697","https://openalex.org/W2171022526"],"related_works":["https://openalex.org/W4360616919","https://openalex.org/W2887721847","https://openalex.org/W1995563988","https://openalex.org/W2270054515","https://openalex.org/W7096775825","https://openalex.org/W2147191899","https://openalex.org/W2236199006","https://openalex.org/W2129132528","https://openalex.org/W2108489651","https://openalex.org/W2809368378"],"abstract_inverted_index":{"We":[0],"describe":[1],"a":[2,48],"gene":[3],"nomenclature":[4],"system":[5],"for":[6,15,18,25,52],"the":[7],"freshwater":[8],"planarian":[9],"Schmidtea":[10],"mediterranea.":[11],"Guidelines":[12],"are":[13],"specified":[14],"designating":[16],"names":[17,39],"genes":[19,44,54],"and":[20,45,67],"proteins,":[21],"as":[22,24],"well":[23],"describing":[26],"RNA-mediated":[27],"genetic":[28],"interference":[29],"(RNAi)":[30],"experiments.":[31],"The":[32],"proposed":[33],"conventions":[34],"aim":[35],"to":[36,42,46],"avoid":[37],"multiple":[38],"being":[40],"ascribed":[41],"single":[43],"establish":[47],"uniform,":[49],"simple":[50],"method":[51],"naming":[53],"in":[55],"S.":[56],"mediterranea":[57],"that":[58],"is":[59],"readily":[60],"understood":[61],"by":[62],"researchers":[63],"working":[64],"on":[65],"planarians":[66],"other":[68],"organisms.":[69]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
