{"id":"https://openalex.org/W2023856485","doi":"https://doi.org/10.1371/journal.pbio.1001308","title":"Rapid De Novo Evolution of X Chromosome Dosage Compensation in Silene latifolia, a Plant with Young Sex Chromosomes","display_name":"Rapid De Novo Evolution of X Chromosome Dosage Compensation in Silene latifolia, a Plant with Young Sex Chromosomes","publication_year":2012,"publication_date":"2012-04-17","ids":{"openalex":"https://openalex.org/W2023856485","doi":"https://doi.org/10.1371/journal.pbio.1001308","mag":"2023856485","pmid":"https://pubmed.ncbi.nlm.nih.gov/22529744"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pbio.1001308","doi":"https://doi.org/10.1371/journal.pbio.1001308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pbio.1001308","pdf_url":"https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.1001308&type=printable","source":{"id":"https://openalex.org/S154343897","display_name":"PLoS Biology","issn_l":"1544-9173","issn":["1544-9173","1545-7885"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-3","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Biology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.1001308&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004753311","display_name":"Aline Muyle","orcid":"https://orcid.org/0000-0002-2200-2336","observed_orcids":["https://orcid.org/0000-0002-2200-2336"]},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Lyon 1 Universit\u00e9","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aline Muyle","raw_affiliation_strings":["Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]},{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022560121","display_name":"Niklaus Zemp","orcid":"https://orcid.org/0000-0002-0991-5130","observed_orcids":["https://orcid.org/0000-0002-0991-5130"]},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405254264","display_name":"Institute of Integrative Biology","ror":"https://ror.org/01kwjhv40","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405254264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Niklaus Zemp","raw_affiliation_strings":["Institute of Integrative Biology (IBZ), ETH Zurich, Z\u00fcrich, Switzerland","Institute of Integrative Biology (IBZ), ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Integrative Biology (IBZ), ETH Zurich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405254264"]},{"raw_affiliation_string":"Institute of Integrative Biology (IBZ), ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405254264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015228286","display_name":"Clothilde Deschamps","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210129159","display_name":"Laboratoire de Microbiologie, Adaptation et Pathog\u00e9nie","ror":"https://ror.org/03p3f6k20","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I203339264","https://openalex.org/I4210096427","https://openalex.org/I4210129159","https://openalex.org/I4210166400","https://openalex.org/I48430043","https://openalex.org/I67348948"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Clothilde Deschamps","raw_affiliation_strings":["P\u00f4le Rh\u00f4ne-Alpes de Bioinformatique (PRABI), Villeurbanne, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"P\u00f4le Rh\u00f4ne-Alpes de Bioinformatique (PRABI), Villeurbanne, France","institution_ids":["https://openalex.org/I4210129159"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045903468","display_name":"Sylvain Mousset","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Lyon 1 Universit\u00e9","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sylvain Mousset","raw_affiliation_strings":["Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]},{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075053284","display_name":"Alex Widmer","orcid":"https://orcid.org/0000-0001-8253-5137","observed_orcids":["https://orcid.org/0000-0001-8253-5137"]},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405254264","display_name":"Institute of Integrative Biology","ror":"https://ror.org/01kwjhv40","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405254264"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Alex Widmer","raw_affiliation_strings":["Institute of Integrative Biology (IBZ), ETH Zurich, Z\u00fcrich, Switzerland","Institute of Integrative Biology (IBZ), ETH Z\u00fcrich, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Integrative Biology (IBZ), ETH Zurich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405254264"]},{"raw_affiliation_string":"Institute of Integrative Biology (IBZ), ETH Z\u00fcrich, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405254264"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064047599","display_name":"Gabriel A. B. Marais","orcid":"https://orcid.org/0000-0003-2134-5967","observed_orcids":["https://orcid.org/0000-0003-2134-5967"]},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Lyon 1 Universit\u00e9","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Gabriel A. B. Marais","raw_affiliation_strings":["Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive (UMR 5558), CNRS/Universit\u00e9 Lyon 1, Villeurbanne, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]},{"raw_affiliation_string":"Laboratoire de Biom\u00e9trie et Biologie Evolutive UMR 5558 CNRS, Universit\u00e9 Lyon 1 Villeurbanne France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I4210135640"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5064047599","https://openalex.org/A5075053284"],"corresponding_institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I35440088","https://openalex.org/I4210135640","https://openalex.org/I4405254264"],"apc_list":{"value":5500,"currency":"USD","value_usd":5500},"apc_paid":{"value":5500,"currency":"USD","value_usd":5500},"fwci":9.3891,"has_fulltext":true,"cited_by_count":166,"citation_normalized_percentile":{"value":0.98644953,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"10","issue":"4","first_page":"e1001308","last_page":"e1001308"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11077","display_name":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","score":0.8852999806404114,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11077","display_name":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","score":0.8852999806404114,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.11330000311136246,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11927","display_name":"Plant Reproductive Biology","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/silene-latifolia","display_name":"Silene latifolia","score":0.9599999785423279},{"id":"https://openalex.org/keywords/x-chromosome-dosage-compensation","display_name":"X chromosome dosage compensation","score":0.8259999752044678},{"id":"https://openalex.org/keywords/sex-chromosome-evolution","display_name":"sex chromosome evolution","score":0.9570000171661377},{"id":"https://openalex.org/keywords/y-chromosome-degeneration","display_name":"Y chromosome degeneration","score":0.875},{"id":"https://openalex.org/keywords/sex-linked-genes","display_name":"sex-linked genes","score":0.8209999799728394},{"id":"https://openalex.org/keywords/gene-expression","display_name":"gene expression","score":0.5440000295639038},{"id":"https://openalex.org/keywords/heteromorphic-sex-chromosomes","display_name":"heteromorphic sex chromosomes","score":0.6100000143051147},{"id":"https://openalex.org/keywords/dioecy","display_name":"dioecy","score":0.7020000219345093}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.922838568687439},{"id":"https://openalex.org/C92509807","wikidata":"https://www.wikidata.org/wiki/Q13417137","display_name":"Dosage compensation","level":4,"score":0.8491866588592529},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.7711488008499146},{"id":"https://openalex.org/C35158069","wikidata":"https://www.wikidata.org/wiki/Q61333","display_name":"X chromosome","level":3,"score":0.6469868421554565},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.6240662336349487},{"id":"https://openalex.org/C60613675","wikidata":"https://www.wikidata.org/wiki/Q1142188","display_name":"Sex linkage","level":4,"score":0.5709241032600403},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.48044487833976746},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.46225234866142273},{"id":"https://openalex.org/C2780246931","wikidata":"https://www.wikidata.org/wiki/Q202771","display_name":"Y chromosome","level":3,"score":0.4472370147705078},{"id":"https://openalex.org/C59582021","wikidata":"https://www.wikidata.org/wiki/Q1128751","display_name":"Contig","level":4,"score":0.4422142207622528},{"id":"https://openalex.org/C137273181","wikidata":"https://www.wikidata.org/wiki/Q2915088","display_name":"Evolution of sexual reproduction","level":3,"score":0.4329526424407959},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.18470701575279236}],"mesh":[{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004303","descriptor_name":"Dosage Compensation, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004303","descriptor_name":"Dosage Compensation, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004303","descriptor_name":"Dosage Compensation, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012730","descriptor_name":"Sex Chromosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012730","descriptor_name":"Sex Chromosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012730","descriptor_name":"Sex Chromosomes","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029751","descriptor_name":"Silene","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029751","descriptor_name":"Silene","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029751","descriptor_name":"Silene","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1371/journal.pbio.1001308","doi":"https://doi.org/10.1371/journal.pbio.1001308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pbio.1001308","pdf_url":"https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.1001308&type=printable","source":{"id":"https://openalex.org/S154343897","display_name":"PLoS Biology","issn_l":"1544-9173","issn":["1544-9173","1545-7885"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-3","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Biology","raw_type":"journal-article"},{"id":"pmid:22529744","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22529744","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS biology","raw_type":"Journal Article"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/48600","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/48600","pdf_url":"http://hdl.handle.net/20.500.11850/48600","source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Biology, 10 (4)","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:2337032","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3328428","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3328428","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3328428","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Biol","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-00698081v1","doi":null,"is_oa":false,"landing_page_url":"https://hal.science/hal-00698081","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Biology, 2012, 10 (4), pp.e1001308. &#x27E8;10.1371/journal.pbio.1001308&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:acf5cbb2a40042ec9c8172b079dd45ed","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/acf5cbb2a40042ec9c8172b079dd45ed","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS Biology, Vol 10, Iss 4, p e1001308 (2012)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/126221","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Rapid_De_Novo_Evolution_of_X_Chromosome_Dosage_Compensation_in_Silene_latifolia_a_Plant_with_Young_Sex_Chromosomes/126221","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"},{"id":"doi:10.3929/ethz-b-000048600","doi":"https://doi.org/10.3929/ethz-b-000048600","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000048600","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1371/journal.pbio.1001308","doi":"https://doi.org/10.1371/journal.pbio.1001308","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pbio.1001308","pdf_url":"https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.1001308&type=printable","source":{"id":"https://openalex.org/S154343897","display_name":"PLoS Biology","issn_l":"1544-9173","issn":["1544-9173","1545-7885"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-3","ki-jl-3","medline","norway-2","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"sustainable_development_goals_aurora":[{"score":0.4099999964237213,"display_name":"Life on land","id":"https://metadata.un.org/sdg/15"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1304575335","display_name":"Porous genomes and the nature of plant species differences in a pair of hybridizing silence species","funder_award_id":"116455","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G544591541","display_name":null,"funder_award_id":"31003A","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G6461798627","display_name":"G\u00e9nomique \u00e9volutive des chromosomes X et Y de Silene latifolia, une plante dio\u00efque","funder_award_id":"ANR-08-JCJC-0109","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320321652","display_name":"Eidgen\u00f6ssische Technische Hochschule Z\u00fcrich","ror":"https://ror.org/05a28rw58"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2023856485.pdf","grobid_xml":"https://content.openalex.org/works/W2023856485.grobid-xml"},"referenced_works_count":83,"referenced_works":["https://openalex.org/W1520017211","https://openalex.org/W1536222891","https://openalex.org/W1646616821","https://openalex.org/W1966394940","https://openalex.org/W1966822396","https://openalex.org/W1968502290","https://openalex.org/W1969462345","https://openalex.org/W1987824602","https://openalex.org/W1988808791","https://openalex.org/W1993484192","https://openalex.org/W1993651315","https://openalex.org/W1994208137","https://openalex.org/W1996025518","https://openalex.org/W1998798649","https://openalex.org/W1999584441","https://openalex.org/W2000894445","https://openalex.org/W2000945483","https://openalex.org/W2008464085","https://openalex.org/W2009298778","https://openalex.org/W2017457962","https://openalex.org/W2020958409","https://openalex.org/W2023106749","https://openalex.org/W2027318023","https://openalex.org/W2035789753","https://openalex.org/W2036714609","https://openalex.org/W2037885699","https://openalex.org/W2043424267","https://openalex.org/W2049263092","https://openalex.org/W2054688162","https://openalex.org/W2056587430","https://openalex.org/W2057277929","https://openalex.org/W2058555694","https://openalex.org/W2058770491","https://openalex.org/W2061537056","https://openalex.org/W2064622956","https://openalex.org/W2065137031","https://openalex.org/W2069367983","https://openalex.org/W2072329331","https://openalex.org/W2074242981","https://openalex.org/W2078075583","https://openalex.org/W2082239357","https://openalex.org/W2084321048","https://openalex.org/W2086399711","https://openalex.org/W2087682482","https://openalex.org/W2088062177","https://openalex.org/W2092658929","https://openalex.org/W2098816092","https://openalex.org/W2102087179","https://openalex.org/W2103441770","https://openalex.org/W2107933549","https://openalex.org/W2108234281","https://openalex.org/W2109183032","https://openalex.org/W2112888168","https://openalex.org/W2114279967","https://openalex.org/W2115987191","https://openalex.org/W2121015682","https://openalex.org/W2121633124","https://openalex.org/W2122896190","https://openalex.org/W2123785866","https://openalex.org/W2126084304","https://openalex.org/W2129283461","https://openalex.org/W2130424498","https://openalex.org/W2131016694","https://openalex.org/W2139562252","https://openalex.org/W2144175267","https://openalex.org/W2145158079","https://openalex.org/W2146224605","https://openalex.org/W2152068619","https://openalex.org/W2153741444","https://openalex.org/W2153800442","https://openalex.org/W2153867544","https://openalex.org/W2157457551","https://openalex.org/W2158249903","https://openalex.org/W2159361962","https://openalex.org/W2159742405","https://openalex.org/W2161926718","https://openalex.org/W2162716521","https://openalex.org/W2166265186","https://openalex.org/W2167952426","https://openalex.org/W2168133698","https://openalex.org/W2168235680","https://openalex.org/W2168557059","https://openalex.org/W2229761840"],"related_works":["https://openalex.org/W2064147650","https://openalex.org/W2592985789","https://openalex.org/W2729996782","https://openalex.org/W2951620843","https://openalex.org/W2111329374","https://openalex.org/W2214683312","https://openalex.org/W2749530326","https://openalex.org/W3016662794","https://openalex.org/W2058853245","https://openalex.org/W2122569961"],"abstract_inverted_index":{"Silene":[0],"latifolia":[1,36,86,159],"is":[2,19,47,199],"a":[3,20,152],"dioecious":[4],"plant":[5],"with":[6,113,151],"heteromorphic":[7],"sex":[8,26,53,215,240],"chromosomes":[9,38],"that":[10,34,116,175,221,229],"have":[11,39],"originated":[12],"only":[13,208],"\u223c10":[14],"million":[15],"years":[16],"ago":[17],"and":[18,43,80,93,102,109,134,139,171,204,228],"promising":[21],"model":[22],"organism":[23],"to":[24,89],"study":[25],"chromosome":[27,46,216],"evolution":[28],"in":[29,51,137,169,185,194,211,226],"plants.":[30],"Previous":[31],"work":[32,57],"suggests":[33],"S.":[35,85,158],"XY":[37],"gradually":[40],"stopped":[41],"recombining":[42],"the":[44,62,157,237],"Y":[45,160],"undergoing":[48],"degeneration":[49,155],"as":[50,180,201],"animal":[52,214],"chromosomes.":[54,241],"However,":[55],"this":[56],"has":[58,205,224],"been":[59,209],"limited":[60],"by":[61],"paucity":[63],"of":[64,73,83,132,144,147,156,166,190,239],"sex-linked":[65,91,98,108,120,191],"genes":[66],"available.":[67],"Here,":[68],"we":[69,127,173],"used":[70],"35":[71],"Gb":[72],"RNA-seq":[74],"data":[75],"from":[76],"multiple":[77],"males":[78,138,170],"(XY)":[79],"females":[81],"(XX)":[82],"an":[84,141],"inbred":[87],"line":[88],"detect":[90],"SNPs":[92],"identified":[94,119],"more":[95],"than":[96],"1,700":[97],"contigs":[99,121,192],"(with":[100],"X-linked":[101,133,167,176],"Y-linked":[103,135,148,181],"alleles).":[104],"Analyses":[105],"using":[106],"known":[107,200],"autosomal":[110],"genes,":[111],"together":[112],"simulations":[114],"indicate":[115],"these":[117],"newly":[118],"are":[122],"reliable.":[123],"Using":[124],"read":[125],"numbers,":[126],"then":[128],"estimated":[129],"expression":[130,146,164,178,183,189],"levels":[131],"alleles":[136,168],"found":[140,174],"overall":[142],"trend":[143],"reduced":[145],"alleles,":[149],"consistent":[150],"widespread":[153],"ongoing":[154],"chromosome.":[161],"By":[162],"comparing":[163],"intensities":[165],"females,":[172],"allele":[177,182],"increases":[179],"decreases":[184],"males,":[186],"which":[187],"makes":[188],"similar":[193],"both":[195],"sexes.":[196],"This":[197],"phenomenon":[198],"dosage":[202,222],"compensation":[203,223],"so":[206],"far":[207],"observed":[210],"evolutionary":[212],"old":[213],"systems.":[217],"Our":[218],"results":[219],"suggest":[220],"evolved":[225],"plants":[227],"it":[230],"can":[231],"quickly":[232],"evolve":[233],"de":[234],"novo":[235],"after":[236],"origin":[238]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":14},{"year":2020,"cited_by_count":14},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":12},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":19},{"year":2014,"cited_by_count":14},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":11}],"updated_date":"2026-10-12T09:40:04.860316","created_date":"2025-10-10T00:00:00"}
