{"id":"https://openalex.org/W2021964172","doi":"https://doi.org/10.1270/jsbbs.62.209","title":"Genetic variation of germination cold tolerance in Japanese rice germplasm","display_name":"Genetic variation of germination cold tolerance in Japanese rice germplasm","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2021964172","doi":"https://doi.org/10.1270/jsbbs.62.209","mag":"2021964172","pmid":"https://pubmed.ncbi.nlm.nih.gov/23226080","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3501937"},"language":"en","primary_location":{"id":"doi:10.1270/jsbbs.62.209","doi":"https://doi.org/10.1270/jsbbs.62.209","is_oa":true,"landing_page_url":"https://doi.org/10.1270/jsbbs.62.209","pdf_url":"https://www.jstage.jst.go.jp/article/jsbbs/62/3/62_209/_pdf","source":{"id":"https://openalex.org/S2764771731","display_name":"Ikushugaku zasshi","issn_l":"0536-3683","issn":["0536-3683","1344-7610","1347-3735","2185-291X"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["dongbi-b","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4327872560","host_organization_name":"Japanese Society of Breeding","host_organization_lineage":["https://openalex.org/P4327872560"],"host_organization_lineage_names":["Japanese Society of Breeding"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Breeding Science","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.jstage.jst.go.jp/article/jsbbs/62/3/62_209/_pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084491862","display_name":"F\u00e1tima Bosetti","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"F\u00e1tima Bosetti","raw_affiliation_strings":["Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020352483","display_name":"Camila Montebelli","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Camila Montebelli","raw_affiliation_strings":["Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005210470","display_name":"Ana Dion\u00edsia da Luz Coelho Novembre","orcid":"https://orcid.org/0000-0002-6513-4654","observed_orcids":["https://orcid.org/0000-0002-6513-4654"]},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ana Dion\u00edsia L.C. Novembre","raw_affiliation_strings":["Crop Sciences Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Crop Sciences Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029622778","display_name":"Helena Maria Carmignani Pescarin Chamma","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Helena Pescarin Chamma","raw_affiliation_strings":["Crop Sciences Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Crop Sciences Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058914099","display_name":"Jos\u00e9 Baldin Pinheiro","orcid":"https://orcid.org/0000-0003-1294-2081","observed_orcids":["https://orcid.org/0000-0003-1294-2081"]},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Jos\u00e9 Baldin Pinheiro","raw_affiliation_strings":["Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genetics Department, \u201cLuiz de Queiroz\u201d College of Agriculture, University of S\u00e3o Paulo","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5058914099"],"corresponding_institution_ids":["https://openalex.org/I17974374"],"apc_list":null,"apc_paid":null,"fwci":1.7805,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.84526636,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"62","issue":"3","first_page":"209","last_page":"215"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12045","display_name":"Rice Cultivation and Yield Improvement","score":0.7476000189781189,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12045","display_name":"Rice Cultivation and Yield Improvement","score":0.7476000189781189,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11098","display_name":"Seed Germination and Physiology","score":0.19779999554157257,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11229","display_name":"Genetics and Plant Breeding","score":0.026399999856948853,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rice","display_name":"rice","score":0.8399999737739563},{"id":"https://openalex.org/keywords/cold-tolerance","display_name":"cold tolerance","score":0.9739999771118164},{"id":"https://openalex.org/keywords/seed-germination","display_name":"seed germination","score":0.9390000104904175},{"id":"https://openalex.org/keywords/cold-stress","display_name":"cold stress","score":0.8679999709129333},{"id":"https://openalex.org/keywords/genetic-variation","display_name":"genetic variation","score":0.8140000104904175},{"id":"https://openalex.org/keywords/coleoptile-length","display_name":"coleoptile length","score":0.9789999723434448},{"id":"https://openalex.org/keywords/radicle-length","display_name":"radicle length","score":0.996999979019165},{"id":"https://openalex.org/keywords/seedling-vigor","display_name":"seedling vigor","score":0.8119999766349792},{"id":"https://openalex.org/keywords/germplasm-evaluation","display_name":"germplasm evaluation","score":0.6100000143051147},{"id":"https://openalex.org/keywords/cultivar-development","display_name":"cultivar development","score":0.4189999997615814}],"concepts":[{"id":"https://openalex.org/C185802005","wikidata":"https://www.wikidata.org/wiki/Q3129307","display_name":"Radicle","level":3,"score":0.9801767468452454},{"id":"https://openalex.org/C94893600","wikidata":"https://www.wikidata.org/wiki/Q572097","display_name":"Coleoptile","level":2,"score":0.9501633644104004},{"id":"https://openalex.org/C100701293","wikidata":"https://www.wikidata.org/wiki/Q193838","display_name":"Germination","level":2,"score":0.8497501611709595},{"id":"https://openalex.org/C2777461220","wikidata":"https://www.wikidata.org/wiki/Q589029","display_name":"Germplasm","level":2,"score":0.8452455401420593},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8396444916725159},{"id":"https://openalex.org/C2776096895","wikidata":"https://www.wikidata.org/wiki/Q1385709","display_name":"Seedling","level":2,"score":0.6909168362617493},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.5521761178970337},{"id":"https://openalex.org/C197321923","wikidata":"https://www.wikidata.org/wiki/Q4886","display_name":"Cultivar","level":2,"score":0.49583420157432556},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.45851871371269226},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.3713218569755554},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.2824528217315674},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1542617380619049},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.05722522735595703}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1270/jsbbs.62.209","doi":"https://doi.org/10.1270/jsbbs.62.209","is_oa":true,"landing_page_url":"https://doi.org/10.1270/jsbbs.62.209","pdf_url":"https://www.jstage.jst.go.jp/article/jsbbs/62/3/62_209/_pdf","source":{"id":"https://openalex.org/S2764771731","display_name":"Ikushugaku zasshi","issn_l":"0536-3683","issn":["0536-3683","1344-7610","1347-3735","2185-291X"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["dongbi-b","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4327872560","host_organization_name":"Japanese Society of Breeding","host_organization_lineage":["https://openalex.org/P4327872560"],"host_organization_lineage_names":["Japanese Society of Breeding"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Breeding Science","raw_type":"journal-article"},{"id":"pmh:002345414","doi":null,"is_oa":true,"landing_page_url":"http://pubmedcentralcanada.ca/pmcc/articles/PMC3501937/pdf/bs-62-209.pdf","pdf_url":"http://pubmedcentralcanada.ca/pmcc/articles/PMC3501937/pdf/bs-62-209.pdf","source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"instacron:USP","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:2513417","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3501937","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmid:23226080","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23226080","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Breeding science","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3501937","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC3501937/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Breed Sci","raw_type":"Text"},{"id":"pmh:oai:www.producao.usp.br:BDPI/35611","doi":null,"is_oa":false,"landing_page_url":"http://www.producao.usp.br/handle/BDPI/35611","pdf_url":null,"source":{"id":"https://openalex.org/S4306401373","display_name":"Scientific Electronic Library Online (S\u00e3o Paulo Research Foundation, Latin American and Caribbean Center on Health Sciences Information, Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2982035970","host_organization_name":"Costa Rican Department of Social Security","host_organization_lineage":["https://openalex.org/I2982035970"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1270/jsbbs.62.209","doi":"https://doi.org/10.1270/jsbbs.62.209","is_oa":true,"landing_page_url":"https://doi.org/10.1270/jsbbs.62.209","pdf_url":"https://www.jstage.jst.go.jp/article/jsbbs/62/3/62_209/_pdf","source":{"id":"https://openalex.org/S2764771731","display_name":"Ikushugaku zasshi","issn_l":"0536-3683","issn":["0536-3683","1344-7610","1347-3735","2185-291X"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":["dongbi-b","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4327872560","host_organization_name":"Japanese Society of Breeding","host_organization_lineage":["https://openalex.org/P4327872560"],"host_organization_lineage_names":["Japanese Society of Breeding"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Breeding Science","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.875,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1839125659","display_name":"Genetic diversity in exotic rice germoplasm evaluated by microsatellite markers, ESTs-SSRs and agromorphologic traits","funder_award_id":"07/06615-6","funder_id":"https://openalex.org/F4320320997","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo"}],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2021964172.pdf","grobid_xml":"https://content.openalex.org/works/W2021964172.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1968235415","https://openalex.org/W1990339285","https://openalex.org/W1994944643","https://openalex.org/W2000386048","https://openalex.org/W2002852001","https://openalex.org/W2009043520","https://openalex.org/W2024894882","https://openalex.org/W2030071461","https://openalex.org/W2056155195","https://openalex.org/W2085567702","https://openalex.org/W2114767246","https://openalex.org/W2126278970","https://openalex.org/W2135384370","https://openalex.org/W2165555652","https://openalex.org/W2168778929","https://openalex.org/W2209032972"],"related_works":["https://openalex.org/W2962995417","https://openalex.org/W1545398814","https://openalex.org/W2789631707","https://openalex.org/W2168778929","https://openalex.org/W3014660494","https://openalex.org/W2114767246","https://openalex.org/W7099377665","https://openalex.org/W4210392538","https://openalex.org/W2777245338","https://openalex.org/W2101048877"],"abstract_inverted_index":{"Low":[0],"temperatures":[1,125],"at":[2,62],"the":[3,42,63,101,113,145,148,162],"initial":[4],"stages":[5],"of":[6,44,100,141,147,164],"rice":[7,25,58],"development":[8],"prevent":[9],"fast":[10],"germination":[11,50,64,122],"and":[12,15,74,86,93,98,105,128,158,166,172],"seedling":[13],"establishment":[14],"may":[16],"cause":[17],"significant":[18],"productivity":[19],"losses.":[20],"In":[21],"order":[22],"to":[23,33,40,109,121],"develop":[24],"cultivars":[26],"exhibiting":[27,130],"cold":[28,97,151,165],"tolerance,":[29],"it":[30],"is":[31],"necessary":[32],"investigate":[34],"genetic":[35,116],"resources,":[36],"providing":[37],"basic":[38],"knowledge":[39],"allow":[41],"introduction":[43],"genes":[45],"involved":[46],"in":[47,103,156,161],"low":[48,110,124],"temperature":[49],"ability":[51],"from":[52],"accessions":[53,59,114,129],"into":[54],"elite":[55],"cultivars.":[56],"Japanese":[57],"were":[60,84,137],"evaluated":[61],"under":[65,89,96,123,175],"two":[66],"conditions:":[67],"13\u00b0C":[68],"for":[69,76,118,133],"28":[70],"days":[71,78],"(cold":[72],"stress)":[73],"28\u00b0C":[75],"seven":[77],"(optimal":[79],"temperature).":[80],"The":[81,139],"traits":[82,119,136],"studied":[83],"coleoptile":[85,92,157,171],"radicle":[87,94,106,159,173],"length":[88,95,107],"optimal":[90],"temperature,":[91],"percentage":[99],"reduction":[102],"coleptile":[104],"due":[108],"temperature.":[111],"Among":[112],"studied,":[115],"variation":[117],"related":[120],"was":[126],"observed":[127],"adequate":[131],"performance":[132],"all":[134],"investigated":[135],"identified.":[138],"use":[140],"multivariate":[142],"analysis":[143],"allowed":[144],"identification":[146],"genotypes":[149],"displaying":[150],"tolerance":[152],"by":[153,169],"smaller":[154],"reductions":[155],"lenght":[160],"presence":[163],"high":[167],"vigour,":[168],"higher":[170],"growth":[174],"cold.":[176]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":4},{"year":2013,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}