{"id":"https://openalex.org/W2020410189","doi":"https://doi.org/10.1038/npre.2010.4908.1","title":"Deciphering the genome structure and paleohistory of Theobroma cacao","display_name":"Deciphering the genome structure and paleohistory of Theobroma cacao","publication_year":2010,"publication_date":"2010-09-16","ids":{"openalex":"https://openalex.org/W2020410189","doi":"https://doi.org/10.1038/npre.2010.4908.1","mag":"2020410189"},"language":"en","primary_location":{"id":"doi:10.1038/npre.2010.4908.1","doi":"https://doi.org/10.1038/npre.2010.4908.1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/npre.2010.4908.1","pdf_url":"https://www.nature.com/articles/npre.2010.4908.1.pdf","source":{"id":"https://openalex.org/S48744551","display_name":"Nature Precedings","issn_l":"1756-0357","issn":["1756-0357"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Precedings","raw_type":"journal-article"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://www.nature.com/articles/npre.2010.4908.1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016451177","display_name":"Cristian Chaparro","orcid":"https://orcid.org/0000-0002-5162-349X","observed_orcids":["https://orcid.org/0000-0002-5162-349X"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I151295451","display_name":"Universit\u00e9 de Perpignan","ror":"https://ror.org/03am2jy38","country_code":"FR","type":"education","lineage":["https://openalex.org/I151295451"]},{"id":"https://openalex.org/I4210130438","display_name":"Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes","ror":"https://ror.org/038207k30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210096427","https://openalex.org/I4210130438"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cristian Chaparro","raw_affiliation_strings":["UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210130438","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047473749","display_name":"Florent Murat","orcid":"https://orcid.org/0000-0003-2116-2511","observed_orcids":["https://orcid.org/0000-0003-2116-2511"]},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210138126","display_name":"G\u00e9n\u00e9tique, Diversit\u00e9, \u00c9cophysiologie des C\u00e9r\u00e9ales","ror":"https://ror.org/04397qy32","country_code":"FR","type":"facility","lineage":["https://openalex.org/I198244214","https://openalex.org/I4210088668","https://openalex.org/I4210138126"]},{"id":"https://openalex.org/I4387154544","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4387154544"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Florent Murat","raw_affiliation_strings":["Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France","institution_ids":["https://openalex.org/I4210088668","https://openalex.org/I4210138126","https://openalex.org/I4387154544"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016888574","display_name":"John E. Carlson","orcid":"https://orcid.org/0000-0001-9129-1867","observed_orcids":["https://orcid.org/0000-0001-9129-1867"]},"institutions":[{"id":"https://openalex.org/I111277659","display_name":"Chonnam National University","ror":"https://ror.org/05kzjxq56","country_code":"KR","type":"education","lineage":["https://openalex.org/I111277659"]},{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["KR","US"],"is_corresponding":false,"raw_author_name":"John Carlson","raw_affiliation_strings":["Penn State University, The School of Forest Resources and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA and The Department of Bioenergy Science and Technology (WCU), Chonnam National University, 333 Yongbongro, Buk-Gu, Gwangju"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, The School of Forest Resources and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA and The Department of Bioenergy Science and Technology (WCU), Chonnam National University, 333 Yongbongro, Buk-Gu, Gwangju","institution_ids":["https://openalex.org/I111277659","https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045221753","display_name":"Valentin Guignon","orcid":"https://orcid.org/0000-0003-0903-6811","observed_orcids":["https://orcid.org/0000-0003-0903-6811"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Valentin Guignon","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026615995","display_name":"Gnion Mathias Tahi","orcid":"https://orcid.org/0009-0000-1575-9261","observed_orcids":["https://orcid.org/0009-0000-1575-9261"]},"institutions":[{"id":"https://openalex.org/I4210131045","display_name":"Centre National de Recherche Agronomique","ror":"https://ror.org/037y0xy94","country_code":"CI","type":"government","lineage":["https://openalex.org/I4210131045"]}],"countries":["CI"],"is_corresponding":false,"raw_author_name":"Mathias Tahi","raw_affiliation_strings":["Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire","institution_ids":["https://openalex.org/I4210131045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052901690","display_name":"Emmanuel Guiderdoni","orcid":"https://orcid.org/0000-0003-2760-2864","observed_orcids":["https://orcid.org/0000-0003-2760-2864"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuel Guiderdoni","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032334368","display_name":"Thierry Legavre","orcid":"https://orcid.org/0000-0002-6753-4774","observed_orcids":["https://orcid.org/0000-0002-6753-4774"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thierry Legavre","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038436589","display_name":"Olivier Fouet","orcid":"https://orcid.org/0000-0001-8547-1474","observed_orcids":["https://orcid.org/0000-0001-8547-1474"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Fouet","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011024409","display_name":"Erika Sallet","orcid":"https://orcid.org/0000-0003-4637-473X","observed_orcids":["https://orcid.org/0000-0003-4637-473X","https://orcid.org/0000-0001-6062-5043"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210115873","display_name":"Laboratoire des Interactions Plantes Microbes Environnement","ror":"https://ror.org/02gwt2810","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I196454796","https://openalex.org/I4210088668","https://openalex.org/I4210115873","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Erika Sallet","raw_affiliation_strings":["INRA-CNRS LIPM Laboratoire des Interactions Plantes Micro-organismes, BP 52627, 31326 Castanet Tolosan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA-CNRS LIPM Laboratoire des Interactions Plantes Micro-organismes, BP 52627, 31326 Castanet Tolosan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210088668","https://openalex.org/I4210115873"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113645300","display_name":"Xavier Sabau","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Xavier Sabau","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108100322","display_name":"Joseph Moroh Akaza","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210131045","display_name":"Centre National de Recherche Agronomique","ror":"https://ror.org/037y0xy94","country_code":"CI","type":"government","lineage":["https://openalex.org/I4210131045"]}],"countries":["CI"],"is_corresponding":false,"raw_author_name":"Joseph Moroh Akaza","raw_affiliation_strings":["Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire","institution_ids":["https://openalex.org/I4210131045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045044494","display_name":"Fran\u00e7is Qu\u00e9tier","orcid":"https://orcid.org/0000-0003-4388-9287","observed_orcids":["https://orcid.org/0000-0003-4388-9287"]},"institutions":[{"id":"https://openalex.org/I88467170","display_name":"Universit\u00e9 d'\u00c9vry Val-d'Essonne","ror":"https://ror.org/00e96v939","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954","https://openalex.org/I88467170"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Francis Quetier","raw_affiliation_strings":["D\u00e9partement de Biologie, Universit\u00e9 d\u2019Evry Val d'Essonne, 25 boulevard Fran\u00e7ois Mitterrand, 91025 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"D\u00e9partement de Biologie, Universit\u00e9 d\u2019Evry Val d'Essonne, 25 boulevard Fran\u00e7ois Mitterrand, 91025 Evry, France","institution_ids":["https://openalex.org/I88467170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084702859","display_name":"Mark J. Guiltinan","orcid":"https://orcid.org/0000-0003-0018-9846","observed_orcids":["https://orcid.org/0000-0003-0018-9846"]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Guiltinan","raw_affiliation_strings":["Penn State University, Department of Horticulture and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Department of Horticulture and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013766158","display_name":"Julie Poulain","orcid":"https://orcid.org/0000-0002-8744-3116","observed_orcids":["https://orcid.org/0000-0002-8744-3116"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Julie Poulain","raw_affiliation_strings":["Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210096708","https://openalex.org/I4210115028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080878843","display_name":"Thomas Schiex","orcid":"https://orcid.org/0000-0001-6049-3415","observed_orcids":["https://orcid.org/0000-0001-6049-3415"]},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Schiex T.","raw_affiliation_strings":["Unit\u00e9 de Biom\u00e9trie et d\u2019Intelligence Artificielle (UBIA), UR875 INRA, F-31320 Castanet Tolosan France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Unit\u00e9 de Biom\u00e9trie et d\u2019Intelligence Artificielle (UBIA), UR875 INRA, F-31320 Castanet Tolosan France","institution_ids":["https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022432045","display_name":"Michael J. Axtell","orcid":"https://orcid.org/0000-0001-8951-7361","observed_orcids":["https://orcid.org/0000-0001-8951-7361"]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Axtell","raw_affiliation_strings":["Penn State University, Bioinformatics and Genomics Ph.D. Program &Department of Biology, University Park, PA 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Bioinformatics and Genomics Ph.D. Program &Department of Biology, University Park, PA 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109599673","display_name":"Bertrand Pitollat","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bertrand Pitollat","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025702012","display_name":"Olivier Panaud","orcid":"https://orcid.org/0000-0002-9292-503X","observed_orcids":["https://orcid.org/0000-0002-9292-503X"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I151295451","display_name":"Universit\u00e9 de Perpignan","ror":"https://ror.org/03am2jy38","country_code":"FR","type":"education","lineage":["https://openalex.org/I151295451"]},{"id":"https://openalex.org/I4210130438","display_name":"Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes","ror":"https://ror.org/038207k30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210096427","https://openalex.org/I4210130438"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Panaud","raw_affiliation_strings":["UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210130438","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061128926","display_name":"Siela N. Maximova","orcid":"https://orcid.org/0000-0001-6614-1058","observed_orcids":["https://orcid.org/0000-0001-6614-1058"]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Siela Maximova","raw_affiliation_strings":["Penn State University, Department of Horticulture and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Department of Horticulture and the Huck Institutes of the Life Sciences, University Park, PA 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105513989","display_name":"Manuel Ru\u00edz","orcid":"https://orcid.org/0000-0001-8153-276X","observed_orcids":["https://orcid.org/0000-0001-8153-276X"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Manuel Ruiz","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046689387","display_name":"Anne Di\u00e9vart","orcid":"https://orcid.org/0000-0001-9460-4638","observed_orcids":["https://orcid.org/0000-0001-9460-4638"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anne Dievart","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091273309","display_name":"Zhaorong Ma","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhaorong Ma","raw_affiliation_strings":["Penn State University, Bioinformatics and Genomics Ph.D. Program &Department of Biology, University Park, PA 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Bioinformatics and Genomics Ph.D. Program &Department of Biology, University Park, PA 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064676526","display_name":"Karina Peres Gramacho","orcid":"https://orcid.org/0000-0003-4037-1554","observed_orcids":["https://orcid.org/0000-0003-4037-1554"]},"institutions":[{"id":"https://openalex.org/I4210155940","display_name":"Comiss\u00e3o Executiva do Plano da Lavoura Cacaueira - Ceplac","ror":"https://ror.org/05dbe0v79","country_code":"BR","type":"government","lineage":["https://openalex.org/I4210155940"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Karina Gramacho","raw_affiliation_strings":["CEPLAC, Km 22 Rod. Ilheus Itabuna, Cx. postal 07, Itabuna 45600-00, Bahia, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CEPLAC, Km 22 Rod. Ilheus Itabuna, Cx. postal 07, Itabuna 45600-00, Bahia, Brazil","institution_ids":["https://openalex.org/I4210155940"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011555000","display_name":"Patrick Wincker","orcid":"https://orcid.org/0000-0001-7562-3454","observed_orcids":["https://orcid.org/0000-0001-7562-3454","https://orcid.org/0000-0001-9707-1443"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Patrick Wincker","raw_affiliation_strings":["Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210096708","https://openalex.org/I4210115028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105454177","display_name":"Yolande Roguet","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Yolande Roguet","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106084415","display_name":"Melissa Kramer","orcid":"https://orcid.org/0000-0001-9669-3611","observed_orcids":["https://orcid.org/0000-0001-9669-3611"]},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melissa Kramer","raw_affiliation_strings":["Cold Spring Harbor Laboratory, NY, 11723, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, NY, 11723, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100773709","display_name":"Yufan Zhang","orcid":"https://orcid.org/0000-0002-0352-1608","observed_orcids":["https://orcid.org/0000-0002-0352-1608"]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yufan Zhang","raw_affiliation_strings":["Penn State University, Plant Biology Graduate Program and the Huck Institutes of the Life Sciences, University Park, PA, 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Plant Biology Graduate Program and the Huck Institutes of the Life Sciences, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104977613","display_name":"Ang\u00e9lique D\u2019Hont","orcid":"https://orcid.org/0000-0002-5318-921X","observed_orcids":["https://orcid.org/0000-0002-5318-921X"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ang\u00e9lique D\u2019Hont","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040221197","display_name":"St\u00e9phanie Bocs","orcid":"https://orcid.org/0000-0001-7850-4426","observed_orcids":["https://orcid.org/0000-0001-7850-4426"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Stephanie Sidibe-Bocs","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079773794","display_name":"Claire Lanaud","orcid":"https://orcid.org/0000-0001-6411-7310","observed_orcids":["https://orcid.org/0000-0001-6411-7310"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Claire Lanaud","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043083503","display_name":"Xavier Argout","orcid":"https://orcid.org/0000-0002-0100-5511","observed_orcids":["https://orcid.org/0000-0002-0100-5511"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Xavier Argout","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012790964","display_name":"Maguy Rodier-Goud","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Maguy Rodier-Goud","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015961696","display_name":"Laura Gelley","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Laura Gelley","raw_affiliation_strings":["Cold Spring Harbor Laboratory, NY, 11723, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, NY, 11723, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077867584","display_name":"Spencer Brown","orcid":"https://orcid.org/0000-0003-4512-9003","observed_orcids":["https://orcid.org/0000-0003-4512-9003"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210130881","display_name":"Institut des Sciences du V\u00e9g\u00e9tal","ror":"https://ror.org/03aqj2f62","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210130881"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Spencer Brown","raw_affiliation_strings":["Institut des Sciences du V\u00e9g\u00e9tal, UPR 2355, CNRS, 91198 Gif-Sur-Ivette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut des Sciences du V\u00e9g\u00e9tal, UPR 2355, CNRS, 91198 Gif-Sur-Ivette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210130881"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074573334","display_name":"Dominique Brunel","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4405263646","display_name":"Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux","ror":"https://ror.org/048dnaz08","country_code":"FR","type":"facility","lineage":["https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4405263646"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Dominique Brunel","raw_affiliation_strings":["INRA, UR 1279 Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux, CEA Institut de G\u00e9nomique, Centre National de G\u00e9notypage, 2, rue Gaston Cr\u00e9mieux, CP5724, 91057 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA, UR 1279 Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux, CEA Institut de G\u00e9nomique, Centre National de G\u00e9notypage, 2, rue Gaston Cr\u00e9mieux, CP5724, 91057 Evry, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4405263646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049611823","display_name":"Di\u00f3genes Infante","orcid":"https://orcid.org/0000-0002-8312-2198","observed_orcids":["https://orcid.org/0000-0002-8312-2198"]},"institutions":[{"id":"https://openalex.org/I4210108684","display_name":"Instituto de Estudios Avanzados","ror":"https://ror.org/014apwk83","country_code":"VE","type":"government","lineage":["https://openalex.org/I4210108684"]}],"countries":["VE"],"is_corresponding":false,"raw_author_name":"Diogenes Infante","raw_affiliation_strings":["Centro Nacional de Biotecnolog\u00eda Agr\u00edcola, Instituto de Estudios Avanzados, Caracas, 1015-A, Venezuela"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro Nacional de Biotecnolog\u00eda Agr\u00edcola, Instituto de Estudios Avanzados, Caracas, 1015-A, Venezuela","institution_ids":["https://openalex.org/I4210108684"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057867643","display_name":"J\u00e9r\u00f4me Salse","orcid":"https://orcid.org/0000-0003-2942-1098","observed_orcids":["https://orcid.org/0000-0003-2942-1098"]},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210138126","display_name":"G\u00e9n\u00e9tique, Diversit\u00e9, \u00c9cophysiologie des C\u00e9r\u00e9ales","ror":"https://ror.org/04397qy32","country_code":"FR","type":"facility","lineage":["https://openalex.org/I198244214","https://openalex.org/I4210088668","https://openalex.org/I4210138126"]},{"id":"https://openalex.org/I4387154544","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4387154544"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jerome Salse","raw_affiliation_strings":["Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France","institution_ids":["https://openalex.org/I4210088668","https://openalex.org/I4210138126","https://openalex.org/I4387154544"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012309956","display_name":"Jos\u00e9 Fernandes Barbosa-Neto","orcid":"https://orcid.org/0000-0003-0656-6833","observed_orcids":["https://orcid.org/0000-0003-0656-6833"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I151295451","display_name":"Universit\u00e9 de Perpignan","ror":"https://ror.org/03am2jy38","country_code":"FR","type":"education","lineage":["https://openalex.org/I151295451"]},{"id":"https://openalex.org/I4210130438","display_name":"Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes","ror":"https://ror.org/038207k30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210096427","https://openalex.org/I4210130438"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jose Fernandes Barbosa-Neto","raw_affiliation_strings":["UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210130438","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001572153","display_name":"Zi Sh","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zi Sh","raw_affiliation_strings":["Penn State University, Plant Biology Graduate Program and the Huck Institutes of the Life Sciences, University Park, PA, 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Plant Biology Graduate Program and the Huck Institutes of the Life Sciences, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007541677","display_name":"Micka\u00ebl Bourge","orcid":"https://orcid.org/0000-0002-4111-6208","observed_orcids":["https://orcid.org/0000-0002-4111-6208"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210130881","display_name":"Institut des Sciences du V\u00e9g\u00e9tal","ror":"https://ror.org/03aqj2f62","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210130881"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mickael Bourge","raw_affiliation_strings":["Institut des Sciences du V\u00e9g\u00e9tal, UPR 2355, CNRS, 91198 Gif-Sur-Ivette, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut des Sciences du V\u00e9g\u00e9tal, UPR 2355, CNRS, 91198 Gif-Sur-Ivette, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210130881"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106038189","display_name":"Wolfgang Golser","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wolfgang Golser","raw_affiliation_strings":["Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106182365","display_name":"Ismael S. K\u00e9b\u00e9","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210131045","display_name":"Centre National de Recherche Agronomique","ror":"https://ror.org/037y0xy94","country_code":"CI","type":"government","lineage":["https://openalex.org/I4210131045"]}],"countries":["CI"],"is_corresponding":false,"raw_author_name":"Ismael Kebe","raw_affiliation_strings":["Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre national de la recherche agronomique (CNRA), B.P. 808, Divo, C\u00f4te d\u2019Ivoire","institution_ids":["https://openalex.org/I4210131045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070886202","display_name":"Jean\u2010Marc Aury","orcid":"https://orcid.org/0000-0003-1718-3010","observed_orcids":["https://orcid.org/0000-0003-1718-3010"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210096708","display_name":"G\u00e9nomique M\u00e9tabolique du Genoscope","ror":"https://ror.org/00xc55v17","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210096427","https://openalex.org/I4210096708","https://openalex.org/I4210113668","https://openalex.org/I88467170"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean Marc Aury","raw_affiliation_strings":["Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genoscope (CEA) and UMR 8030 CNRS-Genoscope-Universit\u00e9 d\u2019Evry, 2 rue Gaston Cr\u00e9mieux, BP5706, 91057 Evry, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210096708","https://openalex.org/I4210115028"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061279430","display_name":"Fran\u00e7ois Sabot","orcid":"https://orcid.org/0000-0002-8522-7583","observed_orcids":["https://orcid.org/0000-0002-8522-7583"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I151295451","display_name":"Universit\u00e9 de Perpignan","ror":"https://ror.org/03am2jy38","country_code":"FR","type":"education","lineage":["https://openalex.org/I151295451"]},{"id":"https://openalex.org/I4210130438","display_name":"Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes","ror":"https://ror.org/038207k30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210096427","https://openalex.org/I4210130438"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Francois Sabot","raw_affiliation_strings":["UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UMR 5096 CNRS-IRD-UPVD, Laboratoire G\u00e9nome et D\u00e9veloppement des Plantes, Universit\u00e9 de Perpignan, 52 Avenue Paul Alduy, 66860 Perpignan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I151295451","https://openalex.org/I4210130438","https://openalex.org/I4210166444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110487909","display_name":"Aur\u00e9lie Berard","orcid":"https://orcid.org/0009-0005-6618-5954","observed_orcids":["https://orcid.org/0009-0005-6618-5954"]},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4405263646","display_name":"Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux","ror":"https://ror.org/048dnaz08","country_code":"FR","type":"facility","lineage":["https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4405263646"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aur\u00e9lie B\u00e9rard","raw_affiliation_strings":["INRA, UR 1279 Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux, CEA Institut de G\u00e9nomique, Centre National de G\u00e9notypage, 2, rue Gaston Cr\u00e9mieux, CP5724, 91057 Evry, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA, UR 1279 Etude du Polymorphisme des G\u00e9nomes V\u00e9g\u00e9taux, CEA Institut de G\u00e9nomique, Centre National de G\u00e9notypage, 2, rue Gaston Cr\u00e9mieux, CP5724, 91057 Evry, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4405263646"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016710102","display_name":"Christopher R. Viot","orcid":"https://orcid.org/0000-0001-6321-4741","observed_orcids":["https://orcid.org/0000-0001-6321-4741"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christopher Viot","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035942249","display_name":"Xiang Song","orcid":"https://orcid.org/0000-0002-1575-2307","observed_orcids":["https://orcid.org/0000-0002-1575-2307"]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiang Song","raw_affiliation_strings":["Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Pierre Costet","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pierre Costet","raw_affiliation_strings":["Chocolaterie VALRHONA, 8, quai du g\u00e9n\u00e9ral de Gaulle, 26600 Tain l\u2019Hermitage, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chocolaterie VALRHONA, 8, quai du g\u00e9n\u00e9ral de Gaulle, 26600 Tain l\u2019Hermitage, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018267453","display_name":"Ga\u00ebtan Droc","orcid":"https://orcid.org/0000-0003-1849-1269","observed_orcids":["https://orcid.org/0000-0003-1849-1269"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Gaetan Droc","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113828219","display_name":"Dave Kudrna","orcid":"https://orcid.org/0000-0002-3092-3629","observed_orcids":["https://orcid.org/0000-0002-3092-3629"]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dave Kudrna","raw_affiliation_strings":["Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112795052","display_name":"Jetty S. S. Ammiraju","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jetty Siva Ammiraju","raw_affiliation_strings":["Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112866552","display_name":"Michel Boccara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Michel Boccara","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001526125","display_name":"Didier Pierre Louis Clement","orcid":"https://orcid.org/0000-0002-7602-6472","observed_orcids":["https://orcid.org/0000-0002-7602-6472"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Didier Clement","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006286921","display_name":"Rod A. Wing","orcid":"https://orcid.org/0000-0001-6633-6226","observed_orcids":["https://orcid.org/0000-0001-6633-6226"]},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rod Wing","raw_affiliation_strings":["Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Arizona Genomics Institute and School of Plant Sciences, University of Arizona, Tucson AZ 85721, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019988390","display_name":"J\u00e9r\u00f4me Gouzy","orcid":"https://orcid.org/0000-0001-5695-4557","observed_orcids":["https://orcid.org/0000-0001-5695-4557"]},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210115873","display_name":"Laboratoire des Interactions Plantes Microbes Environnement","ror":"https://ror.org/02gwt2810","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I196454796","https://openalex.org/I4210088668","https://openalex.org/I4210115873","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jerome Gouzy","raw_affiliation_strings":["INRA-CNRS LIPM Laboratoire des Interactions Plantes Micro-organismes, BP 52627, 31326 Castanet Tolosan Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INRA-CNRS LIPM Laboratoire des Interactions Plantes Micro-organismes, BP 52627, 31326 Castanet Tolosan Cedex, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210088668","https://openalex.org/I4210115873"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013659984","display_name":"Micha\u00ebl Abrouk","orcid":"https://orcid.org/0000-0001-9082-1432","observed_orcids":["https://orcid.org/0000-0001-9082-1432"]},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210138126","display_name":"G\u00e9n\u00e9tique, Diversit\u00e9, \u00c9cophysiologie des C\u00e9r\u00e9ales","ror":"https://ror.org/04397qy32","country_code":"FR","type":"facility","lineage":["https://openalex.org/I198244214","https://openalex.org/I4210088668","https://openalex.org/I4210138126"]},{"id":"https://openalex.org/I4387154544","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4387154544"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Michael Abrouk","raw_affiliation_strings":["Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut National de la Recherch\u00e9 Agronomique UMR 1095, 63100 Clermont-Ferrand, France","institution_ids":["https://openalex.org/I4210088668","https://openalex.org/I4210138126","https://openalex.org/I4387154544"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088865524","display_name":"Stephan Christoph Schuster","orcid":"https://orcid.org/0000-0001-9082-7527","observed_orcids":["https://orcid.org/0000-0001-9082-7527"]},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephan Schuster","raw_affiliation_strings":["Penn State University, Department of Biochemistry and Molecular Biology, University Park, PA, 16802, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn State University, Department of Biochemistry and Molecular Biology, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108350246","display_name":"Ange-Marie Risterucci","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ange Marie Risterucci","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111923502","display_name":"Ronan Rivallan","orcid":"https://orcid.org/0000-0001-6990-1606","observed_orcids":["https://orcid.org/0000-0001-6990-1606"]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ronan Rivalan","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068226921","display_name":"William Richard McCombie","orcid":"https://orcid.org/0000-0003-1899-0682","observed_orcids":["https://orcid.org/0000-0003-1899-0682"]},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. Richard McCombie","raw_affiliation_strings":["Cold Spring Harbor Laboratory, NY, 11723, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, NY, 11723, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005982946","display_name":"Mathilde All\u00e8gre","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mathilde Allegre","raw_affiliation_strings":["CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIRAD - Biological Systems Department \u2013 UMR DAP TA A 96/03- 34398, Montpellier, cedex 5- France","institution_ids":["https://openalex.org/I131077856"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":22,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.8389000296592712,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.8389000296592712,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.07729999721050262,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13069","display_name":"Cocoa and Sweet Potato Agronomy","score":0.031099999323487282,"subfield":{"id":"https://openalex.org/subfields/1108","display_name":"Horticulture"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/theobroma-cacao","display_name":"Theobroma cacao","score":1.0},{"id":"https://openalex.org/keywords/genome-assembly","display_name":"genome assembly","score":0.9660000205039978},{"id":"https://openalex.org/keywords/chromosome-evolution","display_name":"karyotype evolution","score":0.7910000085830688},{"id":"https://openalex.org/keywords/chromosome-fusion","display_name":"chromosome fusion","score":0.8399999737739563},{"id":"https://openalex.org/keywords/gene-family-expansion","display_name":"gene family expansion","score":0.9660000205039978},{"id":"https://openalex.org/keywords/disease-resistance-genes","display_name":"disease resistance genes","score":0.8820000290870667},{"id":"https://openalex.org/keywords/crop-improvement","display_name":"crop improvement","score":0.414000004529953}],"concepts":[{"id":"https://openalex.org/C2780816236","wikidata":"https://www.wikidata.org/wiki/Q162078","display_name":"Theobroma","level":2,"score":0.9464608430862427},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7829715013504028},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6763195395469666},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5676463842391968},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.5237640738487244},{"id":"https://openalex.org/C61271108","wikidata":"https://www.wikidata.org/wiki/Q3180866","display_name":"Genome size","level":4,"score":0.49531617760658264},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.4918372631072998},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4733574390411377},{"id":"https://openalex.org/C2780422015","wikidata":"https://www.wikidata.org/wiki/Q402152","display_name":"Ancestor","level":2,"score":0.459591269493103},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.421636700630188},{"id":"https://openalex.org/C2776809520","wikidata":"https://www.wikidata.org/wiki/Q1071125","display_name":"Sterculiaceae","level":2,"score":0.4195822477340698},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.34032076597213745},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.28729933500289917},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1038/npre.2010.4908.1","doi":"https://doi.org/10.1038/npre.2010.4908.1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/npre.2010.4908.1","pdf_url":"https://www.nature.com/articles/npre.2010.4908.1.pdf","source":{"id":"https://openalex.org/S48744551","display_name":"Nature Precedings","issn_l":"1756-0357","issn":["1756-0357"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Precedings","raw_type":"journal-article"},{"id":"pmh:oai:repository.cshl.edu:42110","doi":null,"is_oa":true,"landing_page_url":"https://repository.cshl.edu/id/eprint/42110/1/10.1038.npre.2010.4908.1.pdf","pdf_url":"https://repository.cshl.edu/id/eprint/42110/1/10.1038.npre.2010.4908.1.pdf","source":{"id":"https://openalex.org/S4306402288","display_name":"Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Paper"},{"id":"pmh:oai:nature.com:10.1038/npre.2010.4908.1","doi":null,"is_oa":true,"landing_page_url":"http://precedings.nature.com/documents/4908/version/1","pdf_url":null,"source":{"id":"https://openalex.org/S48744551","display_name":"Nature Precedings","issn_l":"1756-0357","issn":["1756-0357"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature Precedings","raw_type":"Marker Paper / Data Plan"}],"best_oa_location":{"id":"doi:10.1038/npre.2010.4908.1","doi":"https://doi.org/10.1038/npre.2010.4908.1","is_oa":true,"landing_page_url":"https://doi.org/10.1038/npre.2010.4908.1","pdf_url":"https://www.nature.com/articles/npre.2010.4908.1.pdf","source":{"id":"https://openalex.org/S48744551","display_name":"Nature Precedings","issn_l":"1756-0357","issn":["1756-0357"],"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Precedings","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.5666999816894531,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G8977254007","display_name":"MRI:  Acquisition of Next Generation Sequencers","funder_award_id":"0923128","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309924","display_name":"Agropolis Fondation","ror":"https://ror.org/05kpkpg04"},{"id":"https://openalex.org/F4320310419","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231"},{"id":"https://openalex.org/F4320314202","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320324228","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2020410189.pdf","grobid_xml":"https://content.openalex.org/works/W2020410189.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2092779913","https://openalex.org/W2577468539","https://openalex.org/W2529516003","https://openalex.org/W1409879821","https://openalex.org/W4393370549","https://openalex.org/W1965474081","https://openalex.org/W2618381986","https://openalex.org/W2977824457","https://openalex.org/W2763233800","https://openalex.org/W4388373564"],"abstract_inverted_index":{"Abstract":[0],"We":[1],"sequenced":[2],"and":[3,33,83],"assembled":[4],"the":[5,19,29,46,88,92,102],"genome":[6,31,119],"of":[7,21,28,42,52,59,75,91,128],"Theobroma":[8],"cacao,":[9],"an":[10,98,110],"economically":[11],"important":[12],"tropical":[13],"fruit":[14],"tree":[15],"crop":[16],"that":[17],"is":[18],"source":[20,74],"chocolate.":[22],"The":[23,116],"assembly":[24],"corresponds":[25],"to":[26],"76%":[27],"estimated":[30],"size":[32],"contains":[34],"almost":[35],"all":[36],"previously":[37],"described":[38],"genes,":[39],"with":[40],"82%":[41],"them":[43],"anchored":[44],"on":[45,87],"10":[47],"T.":[48,79,93,104,117],"cacao":[49,80,94,105,118],"chromosomes.":[50],"Analysis":[51],"this":[53],"sequence":[54],"information":[55],"highlighted":[56],"specific":[57],"expansion":[58],"some":[60],"gene":[61],"families":[62],"during":[63],"evolution,":[64],"for":[65,78],"example":[66],"flavonoid-related":[67],"genes.":[68],"It":[69],"also":[70],"provides":[71],"a":[72,124],"major":[73],"candidate":[76],"genes":[77],"disease":[81],"resistance":[82],"quality":[84],"improvement.":[85],"Based":[86],"inferred":[89],"paleohistory":[90],"genome,":[95],"we":[96],"propose":[97],"evolutionary":[99],"scenario":[100],"whereby":[101],"ten":[103],"chromosomes":[106],"were":[107],"shaped":[108],"from":[109],"ancestor":[111],"through":[112],"eleven":[113],"chromosome":[114],"fusions.":[115],"can":[120],"be":[121],"considered":[122],"as":[123],"simple":[125],"living":[126],"relic":[127],"higher":[129],"plant":[130],"evolution.":[131]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
