{"id":"https://openalex.org/W2018714810","doi":"https://doi.org/10.1094/phyto-11-12-0301-r","title":"Genetic and Virulence Variability Among Erwinia tracheiphila Strains Recovered from Different Cucurbit Hosts","display_name":"Genetic and Virulence Variability Among Erwinia tracheiphila Strains Recovered from Different Cucurbit Hosts","publication_year":2013,"publication_date":"2013-08-08","ids":{"openalex":"https://openalex.org/W2018714810","doi":"https://doi.org/10.1094/phyto-11-12-0301-r","mag":"2018714810","pmid":"https://pubmed.ncbi.nlm.nih.gov/23927426"},"language":"en","primary_location":{"id":"doi:10.1094/phyto-11-12-0301-r","doi":"https://doi.org/10.1094/phyto-11-12-0301-r","is_oa":false,"landing_page_url":"https://doi.org/10.1094/phyto-11-12-0301-r","pdf_url":null,"source":{"id":"https://openalex.org/S85201822","display_name":"Phytopathology","issn_l":"0031-949X","issn":["0031-949X","1943-7684"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology\u00ae","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113576917","display_name":"Erika Saalau Rojas","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. Saalau Rojas","raw_affiliation_strings":["Department of Plant Pathology and Microbiology, Iowa State University, Ames 50011, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology and Microbiology, Iowa State University, Ames 50011, USA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111740457","display_name":"Phillip M. Dixon","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"P. M. Dixon","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042330141","display_name":"Jean Carlson Batzer","orcid":"https://orcid.org/0000-0001-6744-857X","observed_orcids":["https://orcid.org/0000-0001-6744-857X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. C. Batzer","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005829756","display_name":"Mark Lawrence Gleason","orcid":"https://orcid.org/0000-0003-1205-7154","observed_orcids":["https://orcid.org/0000-0003-1205-7154"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. L. Gleason","raw_affiliation_strings":["Corresponding author: M. L. Gleason; E-mail address: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","E-mail address: \n                    E-mail Address:\n                    [email\u00a0protected]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Corresponding author: M. L. Gleason; E-mail address: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","institution_ids":[]},{"raw_affiliation_string":"E-mail address: \n                    E-mail Address:\n                    [email\u00a0protected]","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":4.1216,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.93120944,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"103","issue":"9","first_page":"900","last_page":"905"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/erwinia-tracheiphila","display_name":"Erwinia tracheiphila","score":0.9990000128746033},{"id":"https://openalex.org/keywords/host-specificity","display_name":"host specificity","score":0.546999990940094},{"id":"https://openalex.org/keywords/genetic-variation","display_name":"genetic variation","score":0.7379999756813049},{"id":"https://openalex.org/keywords/virulence","display_name":"virulence","score":0.9200000166893005},{"id":"https://openalex.org/keywords/melon","display_name":"Cucumis melo","score":0.8100000023841858},{"id":"https://openalex.org/keywords/cucumber","display_name":"cucumber","score":0.9860000014305115},{"id":"https://openalex.org/keywords/cucurbita","display_name":"Cucurbita","score":0.9980000257492065},{"id":"https://openalex.org/keywords/rep-pcr-fingerprinting","display_name":"rep-PCR fingerprinting","score":0.8029999732971191},{"id":"https://openalex.org/keywords/strain-specificity","display_name":"strain specificity","score":0.5230000019073486},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.5230000019073486},{"id":"https://openalex.org/keywords/host-range","display_name":"host range","score":0.40400001406669617}],"concepts":[{"id":"https://openalex.org/C2778369795","wikidata":"https://www.wikidata.org/wiki/Q148758","display_name":"Cucumis","level":2,"score":0.919121503829956},{"id":"https://openalex.org/C190114075","wikidata":"https://www.wikidata.org/wiki/Q133201","display_name":"Squash","level":2,"score":0.9079849720001221},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8721268177032471},{"id":"https://openalex.org/C2778573692","wikidata":"https://www.wikidata.org/wiki/Q7229863","display_name":"Cucurbita pepo","level":2,"score":0.7639183402061462},{"id":"https://openalex.org/C180032290","wikidata":"https://www.wikidata.org/wiki/Q1664296","display_name":"Inoculation","level":2,"score":0.7484462261199951},{"id":"https://openalex.org/C2779004935","wikidata":"https://www.wikidata.org/wiki/Q17507129","display_name":"Citrullus lanatus","level":2,"score":0.7125319242477417},{"id":"https://openalex.org/C90355303","wikidata":"https://www.wikidata.org/wiki/Q2299244","display_name":"Wilting","level":2,"score":0.7109907865524292},{"id":"https://openalex.org/C2775987957","wikidata":"https://www.wikidata.org/wiki/Q8314","display_name":"Cucurbitaceae","level":2,"score":0.6986600160598755},{"id":"https://openalex.org/C2776949228","wikidata":"https://www.wikidata.org/wiki/Q1475267","display_name":"Fusarium wilt","level":3,"score":0.6719628572463989},{"id":"https://openalex.org/C2780869770","wikidata":"https://www.wikidata.org/wiki/Q5339301","display_name":"Cucurbita","level":2,"score":0.6576238870620728},{"id":"https://openalex.org/C2778400541","wikidata":"https://www.wikidata.org/wiki/Q160571","display_name":"Cucurbita moschata","level":3,"score":0.6519384980201721},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.5818036794662476},{"id":"https://openalex.org/C2779852692","wikidata":"https://www.wikidata.org/wiki/Q1919686","display_name":"Melon","level":2,"score":0.5645979046821594},{"id":"https://openalex.org/C2778495000","wikidata":"https://www.wikidata.org/wiki/Q134827","display_name":"Erwinia","level":3,"score":0.5614954233169556},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.40970873832702637},{"id":"https://openalex.org/C2779430813","wikidata":"https://www.wikidata.org/wiki/Q139958","display_name":"Fusarium oxysporum","level":2,"score":0.40703070163726807},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.09671720862388611},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004885","descriptor_name":"Erwinia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004885","descriptor_name":"Erwinia","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D004885","descriptor_name":"Erwinia","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D005843","descriptor_name":"Geography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016172","descriptor_name":"DNA Fingerprinting","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019662","descriptor_name":"Cucurbitaceae","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D028462","descriptor_name":"Cucumis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D028464","descriptor_name":"Cucurbita","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1094/phyto-11-12-0301-r","doi":"https://doi.org/10.1094/phyto-11-12-0301-r","is_oa":false,"landing_page_url":"https://doi.org/10.1094/phyto-11-12-0301-r","pdf_url":null,"source":{"id":"https://openalex.org/S85201822","display_name":"Phytopathology","issn_l":"0031-949X","issn":["0031-949X","1943-7684"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-b","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology\u00ae","raw_type":"journal-article"},{"id":"pmid:23927426","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23927426","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Phytopathology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":1.0,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W185853798","https://openalex.org/W245833387","https://openalex.org/W282700057","https://openalex.org/W1521703296","https://openalex.org/W1971695397","https://openalex.org/W2030525767","https://openalex.org/W2050313545","https://openalex.org/W2076017377","https://openalex.org/W2082317013","https://openalex.org/W2086458611","https://openalex.org/W2094780135","https://openalex.org/W2102544631","https://openalex.org/W2109225423","https://openalex.org/W2117149629","https://openalex.org/W2123754608","https://openalex.org/W2126722310","https://openalex.org/W2127628697","https://openalex.org/W2130849956","https://openalex.org/W2142089745","https://openalex.org/W2156302453","https://openalex.org/W2157979157","https://openalex.org/W2161219169","https://openalex.org/W2163579799","https://openalex.org/W2169419647","https://openalex.org/W2170916171","https://openalex.org/W2172210567","https://openalex.org/W2321499494","https://openalex.org/W2608351237"],"related_works":["https://openalex.org/W1937365715","https://openalex.org/W2952542037","https://openalex.org/W7005547126","https://openalex.org/W2275463632","https://openalex.org/W2291003270","https://openalex.org/W2792833919","https://openalex.org/W185853798","https://openalex.org/W7095133238","https://openalex.org/W2094780135","https://openalex.org/W4402951550"],"abstract_inverted_index":{"The":[0],"causal":[1],"agent":[2],"of":[3,36,76,147,162,193,236,265],"cucurbit":[4],"bacterial":[5],"wilt,":[6],"Erwinia":[7],"tracheiphila,":[8],"has":[9],"a":[10,102,160,190,255],"wide":[11],"host":[12,140],"range":[13],"in":[14,101],"the":[15,121,137,144,148,194,233,260],"family":[16],"Cucurbitaceae,":[17],"including":[18],"economically":[19],"important":[20],"crops":[21],"such":[22],"as":[23],"muskmelon":[24,93,152,157,198,203],"(Cucumis":[25],"melo),":[26],"cucumber":[27,150,196],"(C.":[28],"sativus),":[29],"and":[30,51,94,115,151,164,177,185,197,206,218,226,242,262],"squash":[31,89,96,172,212],"(Cucurbita":[32],"spp.).":[33],"Genetic":[34],"variability":[35,58],"69":[37],"E.":[38,80,240,266],"tracheiphila":[39,81,241],"strains":[40,63,74,82,112,133,153,199],"was":[41],"investigated":[42],"by":[43,99],"repetitive-element":[44],"polymerase":[45],"chain":[46],"reaction":[47],"(rep-PCR)":[48],"using":[49],"BOXA1R":[50],"ERIC1-2":[52],"primers.":[53],"Fingerprint":[54],"profiles":[55,117],"revealed":[56],"significant":[57],"associated":[59,248],"with":[60,120,132,182,223,249],"crop":[61,139],"host;":[62],"isolated":[64,83],"from":[65,71,84,136],"Cucumis":[66],"spp.":[67],"were":[68,90,107,113,118,130],"clearly":[69],"distinguishable":[70],"Cucurbita":[72],"spp.-isolated":[73],"regardless":[75],"geographic":[77],"origin.":[78],"Twelve":[79],"muskmelon,":[85],"cucumber,":[86],"or":[87],"summer":[88,95,211],"inoculated":[91,122,131,181,222],"onto":[92],"seedlings,":[97],"followed":[98],"incubation":[100],"growth":[103],"chamber.":[104],"Wilt":[105],"symptoms":[106],"assessed":[108],"over":[109],"3":[110],"weeks,":[111],"reisolated,":[114],"rep-PCR":[116],"compared":[119],"strains.":[123],"Wilting":[124],"occurred":[125],"significantly":[126],"faster":[127],"when":[128,180,221],"seedlings":[129,158,173,213],"that":[134,244],"originated":[135],"same":[138],"genus":[141],"(P<0.001).":[142],"In":[143,189],"first":[145,234,256],"run":[146,192],"experiment,":[149,195],"caused":[154,200],"wilting":[155,201],"on":[156,202],"at":[159,204,215],"median":[161],"7.8":[163],"5.6":[165],"days":[166],"after":[167],"inoculation":[168],"(dai),":[169],"respectively.":[170,188,229],"Summer":[171],"wilted":[174,214],"18.0,":[175],"15.7,":[176],"5.7":[178],"dai":[179,220],"muskmelon-,":[183,224],"cucumber-,":[184,225],"squash-origin":[186,227],"strains,":[187,228],"second":[191],"7.0":[205],"6.9":[207],"dai,":[208],"respectively,":[209],"whereas":[210],"23.6,":[216],"29.0":[217],"9.0":[219],"Our":[230],"results":[231],"provide":[232],"evidence":[235],"genetic":[237,261],"diversity":[238],"within":[239],"suggest":[243],"strain":[245],"specificity":[246],"is":[247,254],"plant":[250],"host.":[251],"This":[252],"advance":[253],"step":[257],"toward":[258],"understanding":[259],"population":[263],"structure":[264],"tracheiphila.":[267]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":1}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
