{"id":"https://openalex.org/W2017704153","doi":"https://doi.org/10.1038/srep09001","title":"Molecular-based approaches to characterize coastal microbial community and their potential relation to the trophic state of Red Sea","display_name":"Molecular-based approaches to characterize coastal microbial community and their potential relation to the trophic state of Red Sea","publication_year":2015,"publication_date":"2015-03-11","ids":{"openalex":"https://openalex.org/W2017704153","doi":"https://doi.org/10.1038/srep09001","mag":"2017704153","pmid":"https://pubmed.ncbi.nlm.nih.gov/25758166","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4355682"},"language":"en","primary_location":{"id":"doi:10.1038/srep09001","doi":"https://doi.org/10.1038/srep09001","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep09001","pdf_url":"https://www.nature.com/articles/srep09001.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/srep09001.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017680058","display_name":"Mohd Ikram Ansari","orcid":"https://orcid.org/0000-0001-7678-4639","observed_orcids":["https://orcid.org/0000-0001-7678-4639"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mohd Ikram Ansari","raw_affiliation_strings":["Water Desalination and Reuse Center, Environmental Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Water Desalination and Reuse Center, Environmental Science and Engineering","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071185486","display_name":"Moustapha Harb","orcid":"https://orcid.org/0000-0002-1566-987X","observed_orcids":["https://orcid.org/0000-0002-1566-987X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Moustapha Harb","raw_affiliation_strings":["Water Desalination and Reuse Center, Environmental Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Water Desalination and Reuse Center, Environmental Science and Engineering","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047715267","display_name":"Burton H. Jones","orcid":"https://orcid.org/0000-0002-9599-1593","observed_orcids":["https://orcid.org/0000-0002-9599-1593"]},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Burton Jones","raw_affiliation_strings":["Red Sea Research Center, King Abdullah University of Science and Technology (KAUST), 4700 King Abdullah Boulevard, Thuwal 23955-6900, Saudi Arabia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Red Sea Research Center, King Abdullah University of Science and Technology (KAUST), 4700 King Abdullah Boulevard, Thuwal 23955-6900, Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089126742","display_name":"Pei\u2010Ying Hong","orcid":"https://orcid.org/0000-0002-4474-6600","observed_orcids":["https://orcid.org/0000-0002-4474-6600"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Pei-Ying Hong","raw_affiliation_strings":["Water Desalination and Reuse Center, Environmental Science and Engineering"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Water Desalination and Reuse Center, Environmental Science and Engineering","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5089126742"],"corresponding_institution_ids":[],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":4.0078,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.93044979,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"5","issue":"1","first_page":"9001","last_page":"9001"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.5346999764442444,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.5346999764442444,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11331","display_name":"Fecal contamination and water quality","score":0.4203999936580658,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11634","display_name":"Water Quality and Pollution Assessment","score":0.005200000014156103,"subfield":{"id":"https://openalex.org/subfields/2312","display_name":"Water Science and Technology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/red-sea","display_name":"Red Sea","score":0.8349999785423279},{"id":"https://openalex.org/keywords/trophic-state","display_name":"trophic state","score":0.9240000247955322},{"id":"https://openalex.org/keywords/microbial-source-tracking","display_name":"microbial source tracking","score":0.8939999938011169},{"id":"https://openalex.org/keywords/enterococcus","display_name":"Enterococcus","score":0.953000009059906},{"id":"https://openalex.org/keywords/arcobacter-butzleri","display_name":"Arcobacter butzleri","score":0.8259999752044678},{"id":"https://openalex.org/keywords/pseudomonas-aeruginosa","display_name":"Pseudomonas aeruginosa","score":0.902999997138977},{"id":"https://openalex.org/keywords/campylobacter-coli","display_name":"Campylobacter coli","score":0.9629999995231628},{"id":"https://openalex.org/keywords/cyanobacteria","display_name":"cyanobacteria","score":0.7549999952316284},{"id":"https://openalex.org/keywords/prochlorococcus","display_name":"Prochlorococcus","score":0.9879999756813049},{"id":"https://openalex.org/keywords/ostreococcus","display_name":"Ostreococcus","score":0.9940000176429749},{"id":"https://openalex.org/keywords/urban-runoff","display_name":"urban runoff","score":0.6790000200271606},{"id":"https://openalex.org/keywords/recreational-water-quality","display_name":"recreational water quality","score":0.7059999704360962},{"id":"https://openalex.org/keywords/microbial-biomarkers","display_name":"microbial biomarkers","score":0.5440000295639038},{"id":"https://openalex.org/keywords/total-organic-carbon","display_name":"total organic carbon","score":0.7749999761581421},{"id":"https://openalex.org/keywords/total-nitrogen","display_name":"total nitrogen","score":0.675000011920929},{"id":"https://openalex.org/keywords/beach-water-quality","display_name":"beach water quality","score":0.5920000076293945}],"concepts":[{"id":"https://openalex.org/C72958200","wikidata":"https://www.wikidata.org/wiki/Q1053008","display_name":"Trophic level","level":2,"score":0.8625274896621704},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6102100610733032},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.47145113348960876},{"id":"https://openalex.org/C48103436","wikidata":"https://www.wikidata.org/wiki/Q599031","display_name":"State (computer science)","level":2,"score":0.4484979808330536},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3156059980392456},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.288418173789978},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.1728600263595581},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005843","descriptor_name":"Geography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012623","descriptor_name":"Seawater","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D014871","descriptor_name":"Water Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019156","descriptor_name":"Indian Ocean","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1038/srep09001","doi":"https://doi.org/10.1038/srep09001","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep09001","pdf_url":"https://www.nature.com/articles/srep09001.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:3326583","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4355682","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4355682","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4355682","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sci Rep","raw_type":"Text"},{"id":"pmid:25758166","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25758166","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific reports","raw_type":"Journal Article"},{"id":"pmh:oai:repository.kaust.edu.sa:10754/346877","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/10754/346877","pdf_url":null,"source":{"id":"https://openalex.org/S4306401596","display_name":"King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I71920554","host_organization_name":"King Abdullah University of Science and Technology","host_organization_lineage":["https://openalex.org/I71920554"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1038/srep09001","doi":"https://doi.org/10.1038/srep09001","is_oa":true,"landing_page_url":"https://doi.org/10.1038/srep09001","pdf_url":"https://www.nature.com/articles/srep09001.pdf","source":{"id":"https://openalex.org/S196734849","display_name":"Scientific Reports","issn_l":"2045-2322","issn":["2045-2322"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Scientific Reports","raw_type":"journal-article"},"sustainable_development_goals":[{"score":1.0,"display_name":"Life below water","id":"https://metadata.un.org/sdg/14"},{"score":0.8999999761581421,"display_name":"Clean water and sanitation","id":"https://metadata.un.org/sdg/6"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G4997839875","display_name":null,"funder_award_id":"BAS/1/1032-01-01","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G5563670086","display_name":null,"funder_award_id":"BAS/1/1033\u201001\u201001","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"}],"funders":[{"id":"https://openalex.org/F4320322320","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2017704153.pdf","grobid_xml":"https://content.openalex.org/works/W2017704153.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W12294379","https://openalex.org/W1958790533","https://openalex.org/W1965295042","https://openalex.org/W1965436305","https://openalex.org/W1968917920","https://openalex.org/W1973200192","https://openalex.org/W2002063737","https://openalex.org/W2005889838","https://openalex.org/W2006829372","https://openalex.org/W2009536570","https://openalex.org/W2011985632","https://openalex.org/W2018923985","https://openalex.org/W2022269454","https://openalex.org/W2032723937","https://openalex.org/W2046225142","https://openalex.org/W2064369795","https://openalex.org/W2064728879","https://openalex.org/W2068438604","https://openalex.org/W2093707886","https://openalex.org/W2095250142","https://openalex.org/W2097623238","https://openalex.org/W2098199333","https://openalex.org/W2098301314","https://openalex.org/W2129280133","https://openalex.org/W2136879569","https://openalex.org/W2138108754","https://openalex.org/W2143617724","https://openalex.org/W2148938510","https://openalex.org/W2151614941","https://openalex.org/W2155066423","https://openalex.org/W2162844831","https://openalex.org/W2170418978","https://openalex.org/W2182602160","https://openalex.org/W2318226139","https://openalex.org/W2329636529","https://openalex.org/W2331445789","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4410542334","https://openalex.org/W4205581929","https://openalex.org/W2610303203","https://openalex.org/W2883723184","https://openalex.org/W3091951041","https://openalex.org/W2740816721","https://openalex.org/W3158844664","https://openalex.org/W3043826064","https://openalex.org/W2064098993","https://openalex.org/W2116929952"],"abstract_inverted_index":{"Molecular-based":[0],"approaches":[1],"were":[2,23,145,172,178],"used":[3,26],"to":[4,10,27,119,135,157],"characterize":[5],"the":[6,12,30,39,49,63,87,101,197],"coastal":[7],"microbiota":[8],"and":[9,20,25,53,78,114,125,142,170,184],"elucidate":[11],"trophic":[13],"state":[14],"of":[15,32,41,48,107,129,138,196],"Red":[16],"Sea.":[17],"Nutrient":[18],"content":[19],"enterococci":[21,69,103],"numbers":[22],"monitored,":[24],"correlate":[28,98],"with":[29,100,123,165],"abundance":[31,106,128,153],"microbial":[33],"markers.":[34],"Microbial":[35],"source":[36],"tracking":[37],"revealed":[38],"presence":[40],">1":[42],"human-associated":[43],"Bacteroides":[44],"spp.":[45,169],"at":[46,54],"some":[47],"near-shore":[50,88],"sampling":[51],"sites":[52],"a":[55],"heavily":[56],"frequented":[57],"beach.":[58],"Water":[59],"samples":[60],"collected":[61],"from":[62,93,155],"beaches":[64],"had":[65],"occasional":[66],"exceedances":[67],"in":[68,86,152,175],"numbers,":[70],"higher":[71],"total":[72],"organic":[73],"carbon":[74],"(TOC,":[75],"1.48-2.18":[76],"mg/L)":[77,82],"nitrogen":[79],"(TN,":[80],"0.15-0.27":[81],"than":[83],"that":[84,177],"detected":[85,151],"waters.":[89],"Enterococci":[90],"abundances":[91],"obtained":[92],"next-generation":[94],"sequencing":[95],"did":[96],"not":[97],"well":[99],"cultured":[102],"numbers.":[104],"The":[105],"certain":[108],"genera,":[109],"for":[110,133],"example":[111],"Arcobacter,":[112],"Pseudomonas":[113,140],"unclassified":[115],"Campylobacterales,":[116],"was":[117,149],"observed":[118],"exhibit":[120],"slight":[121],"correlation":[122],"TOC":[124],"TN.":[126],"Low":[127],"functional":[130],"genes":[131],"accounting":[132],"up":[134],"41":[136],"copies/L":[137],"each":[139],"aeruginosa":[141],"Campylobacter":[143],"coli":[144],"detected.":[146],"Arcobacter":[147],"butzleri":[148],"also":[150],"ranging":[154],"111":[156],"238":[158],"copies/L.":[159],"Operational":[160],"taxonomic":[161],"units":[162],"(OTUs)":[163],"associated":[164],"cyanobacteria,":[166],"Prochlorococcus,":[167],"Ostreococcus":[168],"Gramella":[171],"more":[173],"prevalent":[174],"waters":[176],"likely":[179],"impacted":[180],"by":[181],"urban":[182],"runoffs":[183],"recreational":[185],"activities.":[186],"These":[187],"OTUs":[188],"could":[189],"potentially":[190],"serve":[191],"as":[192],"quantifiable":[193],"markers":[194],"indicative":[195],"water":[198],"quality.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
