{"id":"https://openalex.org/W2017294990","doi":"https://doi.org/10.1128/genomea.00249-13","title":"Draft Genome Sequence of the Serratia marcescens Strain VGH107, a Taiwanese Clinical Isolate","display_name":"Draft Genome Sequence of the Serratia marcescens Strain VGH107, a Taiwanese Clinical Isolate","publication_year":2013,"publication_date":"2013-05-17","ids":{"openalex":"https://openalex.org/W2017294990","doi":"https://doi.org/10.1128/genomea.00249-13","mag":"2017294990","pmid":"https://pubmed.ncbi.nlm.nih.gov/23469360","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3587954"},"language":"en","primary_location":{"id":"doi:10.1128/genomea.00249-13","doi":"https://doi.org/10.1128/genomea.00249-13","is_oa":true,"landing_page_url":"https://doi.org/10.1128/genomea.00249-13","pdf_url":null,"source":{"id":"https://openalex.org/S2756006110","display_name":"Genome Announcements","issn_l":"2169-8287","issn":["2169-8287"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","poland-70"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Announcements","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1128/genomea.00249-13","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063076942","display_name":"Po\u2010Yu Liu","orcid":"https://orcid.org/0000-0001-8006-4917","observed_orcids":["https://orcid.org/0000-0001-8006-4917"]},"institutions":[{"id":"https://openalex.org/I4210091773","display_name":"Taichung Veterans General Hospital","ror":"https://ror.org/00e87hq62","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210091773"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Po-Yu Liu","raw_affiliation_strings":["Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan;","institution_ids":["https://openalex.org/I4210091773"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091279923","display_name":"Yao\u2010Ting Huang","orcid":"https://orcid.org/0000-0001-9253-2394","observed_orcids":["https://orcid.org/0000-0001-9253-2394"]},"institutions":[{"id":"https://openalex.org/I148099254","display_name":"National Chung Cheng University","ror":"https://ror.org/0028v3876","country_code":"TW","type":"education","lineage":["https://openalex.org/I148099254"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yao-Ting Huang","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Chung Cheng University, Minxiong, Taiwan;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Chung Cheng University, Minxiong, Taiwan;","institution_ids":["https://openalex.org/I148099254"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101481546","display_name":"Sheng-Yi Lin","orcid":"https://orcid.org/0009-0004-8865-2122","observed_orcids":["https://orcid.org/0009-0004-8865-2122"]},"institutions":[{"id":"https://openalex.org/I162838928","display_name":"National Chung Hsing University","ror":"https://ror.org/05vn3ca78","country_code":"TW","type":"education","lineage":["https://openalex.org/I162838928"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Sheng-Yi Lin","raw_affiliation_strings":["Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan","Institute of Biomedical Sciences, National Chung Hsing University, Taichung, Taiwan;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan","institution_ids":["https://openalex.org/I162838928"]},{"raw_affiliation_string":"Institute of Biomedical Sciences, National Chung Hsing University, Taichung, Taiwan;","institution_ids":["https://openalex.org/I162838928"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041088895","display_name":"Gee-Cheng Chang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210091773","display_name":"Taichung Veterans General Hospital","ror":"https://ror.org/00e87hq62","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210091773"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Gee-Cheng Chang","raw_affiliation_strings":["Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan;","institution_ids":["https://openalex.org/I4210091773"]}]},{"author_position":"last","author":{"id":null,"display_name":"Jian-Wei Chen","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I162838928","display_name":"National Chung Hsing University","ror":"https://ror.org/05vn3ca78","country_code":"TW","type":"education","lineage":["https://openalex.org/I162838928"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Jian-Wei Chen","raw_affiliation_strings":["Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan","Institute of Biomedical Sciences, National Chung Hsing University, Taichung, Taiwan;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan","institution_ids":["https://openalex.org/I162838928"]},{"raw_affiliation_string":"Institute of Biomedical Sciences, National Chung Hsing University, Taichung, Taiwan;","institution_ids":["https://openalex.org/I162838928"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041088895"],"corresponding_institution_ids":["https://openalex.org/I162838928","https://openalex.org/I4210091773"],"apc_list":null,"apc_paid":null,"fwci":0.237,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.57647059,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"1","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":0.8550000190734863,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13849","display_name":"Enterobacteriaceae and Cronobacter Research","score":0.8550000190734863,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.03819999843835831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.038100000470876694,"subfield":{"id":"https://openalex.org/subfields/1313","display_name":"Molecular Medicine"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/serratia-marcescens","display_name":"Serratia marcescens","score":1.0},{"id":"https://openalex.org/keywords/draft-genome-sequence","display_name":"draft genome sequence","score":0.8709999918937683},{"id":"https://openalex.org/keywords/clinical-isolates","display_name":"clinical isolates","score":0.8560000061988831},{"id":"https://openalex.org/keywords/wound-infection","display_name":"wound infection","score":0.9399999976158142},{"id":"https://openalex.org/keywords/enterobacteriaceae","display_name":"Enterobacteriaceae","score":0.953000009059906},{"id":"https://openalex.org/keywords/bacterial-genomics","display_name":"bacterial genomics","score":0.722000002861023}],"concepts":[{"id":"https://openalex.org/C2776309202","wikidata":"https://www.wikidata.org/wiki/Q140004","display_name":"Serratia marcescens","level":4,"score":0.992437481880188},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.765379011631012},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.6962867379188538},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6458727717399597},{"id":"https://openalex.org/C2778910516","wikidata":"https://www.wikidata.org/wiki/Q380136","display_name":"Enterobacteriaceae","level":4,"score":0.5982523560523987},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.594469428062439},{"id":"https://openalex.org/C2776450100","wikidata":"https://www.wikidata.org/wiki/Q134980","display_name":"Serratia","level":4,"score":0.5522847771644592},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5075205564498901},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2704070210456848},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20817267894744873},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2053442895412445},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.16326594352722168},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C2781463711","wikidata":"https://www.wikidata.org/wiki/Q131143","display_name":"Pseudomonas","level":3,"score":0.0}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1128/genomea.00249-13","doi":"https://doi.org/10.1128/genomea.00249-13","is_oa":true,"landing_page_url":"https://doi.org/10.1128/genomea.00249-13","pdf_url":null,"source":{"id":"https://openalex.org/S2756006110","display_name":"Genome Announcements","issn_l":"2169-8287","issn":["2169-8287"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","poland-70"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Announcements","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:2653857","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3656211","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3587954","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3587954","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Announc","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3656211","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3656211","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Announc","raw_type":"Text"},{"id":"pmid:23469360","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23469360","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome announcements","raw_type":"Journal Article"},{"id":"pmid:23682149","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23682149","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome announcements","raw_type":"Journal Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.815.8289","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.815.8289","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/21/b4/e00249-13.PMC3656211.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.833.3314","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.833.3314","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://genomea.asm.org/content/1/3/e00249-13.full.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1128/genomea.00249-13","doi":"https://doi.org/10.1128/genomea.00249-13","is_oa":true,"landing_page_url":"https://doi.org/10.1128/genomea.00249-13","pdf_url":null,"source":{"id":"https://openalex.org/S2756006110","display_name":"Genome Announcements","issn_l":"2169-8287","issn":["2169-8287"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","poland-70"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genome Announcements","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.9537000060081482,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G8235377835","display_name":null,"funder_award_id":"101-2627-B-194-002","funder_id":"https://openalex.org/F4320321040","funder_display_name":"National Science Council"}],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W2012016911","https://openalex.org/W2033531015","https://openalex.org/W2042881722","https://openalex.org/W2045843097","https://openalex.org/W2123712967","https://openalex.org/W2137892645","https://openalex.org/W2149429041","https://openalex.org/W2161546116"],"related_works":["https://openalex.org/W2767341696","https://openalex.org/W2159893712","https://openalex.org/W2071404531","https://openalex.org/W2591592977","https://openalex.org/W2187216847","https://openalex.org/W4409926797","https://openalex.org/W4414283666","https://openalex.org/W2425856265","https://openalex.org/W2416371165","https://openalex.org/W2927186012"],"abstract_inverted_index":{"Serratia":[0],"marcescens,":[1],"a":[2,20,34,40],"member":[3],"of":[4,12,15,25],"the":[5,9],"family":[6],"Enterobacteriaceae,":[7],"is":[8],"causative":[10],"agent":[11],"various":[13],"types":[14],"wound":[16],"infections.":[17],"We":[18],"report":[19],"high-quality":[21],"draft":[22],"genome":[23],"sequence":[24],"S.":[26],"marcescens":[27],"strain":[28],"VGH107,":[29],"which":[30],"was":[31],"isolated":[32],"from":[33,39],"patient":[35],"with":[36],"an":[37],"infection":[38],"snakebite":[41],"wound.":[42]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-10-28T10:33:24.094632","created_date":"2016-06-24T00:00:00"}