{"id":"https://openalex.org/W2016352564","doi":"https://doi.org/10.1387/ijdb.072508zj","title":"Fusion, gene misexpression and homeotic transformations in vertebral development of the gnathostome stem group (Placodermi)","display_name":"Fusion, gene misexpression and homeotic transformations in vertebral development of the gnathostome stem group (Placodermi)","publication_year":2009,"publication_date":"2009-10-29","ids":{"openalex":"https://openalex.org/W2016352564","doi":"https://doi.org/10.1387/ijdb.072508zj","mag":"2016352564","pmid":"https://pubmed.ncbi.nlm.nih.gov/19876847"},"language":"en","primary_location":{"id":"doi:10.1387/ijdb.072508zj","doi":"https://doi.org/10.1387/ijdb.072508zj","is_oa":true,"landing_page_url":"https://doi.org/10.1387/ijdb.072508zj","pdf_url":"https://ijdb.ehu.eus/article/pdf/072508zj","source":{"id":"https://openalex.org/S47908780","display_name":"The International Journal of Developmental Biology","issn_l":"0214-6282","issn":["0214-6282","1696-3547"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","medline","norway-1","poland-70","russia-white-list-3"],"host_organization":"https://openalex.org/P4310321029","host_organization_name":"University of the Basque Country","host_organization_lineage":["https://openalex.org/P4310321029"],"host_organization_lineage_names":["University of the Basque Country"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International Journal of Developmental Biology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://ijdb.ehu.eus/article/pdf/072508zj","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063404856","display_name":"Zerina Johanson","orcid":"https://orcid.org/0000-0002-8444-6776","observed_orcids":["https://orcid.org/0000-0002-8444-6776"]},"institutions":[{"id":"https://openalex.org/I1336856363","display_name":"Natural History Museum","ror":"https://ror.org/039zvsn29","country_code":"GB","type":"archive","lineage":["https://openalex.org/I1336856363"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Zerina Johanson","raw_affiliation_strings":["Department of Palaeontology, Natural History Museum, London, UK. z.johanson@nhm.ac.uk","Department of Palaeontology, Natural History Museum, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Palaeontology, Natural History Museum, London, UK. z.johanson@nhm.ac.uk","institution_ids":["https://openalex.org/I1336856363"]},{"raw_affiliation_string":"Department of Palaeontology, Natural History Museum, London, UK","institution_ids":["https://openalex.org/I1336856363"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049090176","display_name":"Robert K. Carr","orcid":"https://orcid.org/0000-0002-7090-4609","observed_orcids":["https://orcid.org/0000-0002-7090-4609"]},"institutions":[{"id":"https://openalex.org/I4210106879","display_name":"Ohio University","ror":"https://ror.org/01jr3y717","country_code":"US","type":"education","lineage":["https://openalex.org/I4210106879"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Carr","raw_affiliation_strings":["Department of Biological Sciences, Irvine Hall, Ohio University, Athens, OH, USA and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Irvine Hall, Ohio University, Athens, OH, USA and","institution_ids":["https://openalex.org/I4210106879"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112548670","display_name":"Alex Ritchie","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I1328215151","display_name":"Australian Museum","ror":"https://ror.org/02zv4ka60","country_code":"AU","type":"archive","lineage":["https://openalex.org/I1328215151"]},{"id":"https://openalex.org/I1336856363","display_name":"Natural History Museum","ror":"https://ror.org/039zvsn29","country_code":"GB","type":"archive","lineage":["https://openalex.org/I1336856363"]}],"countries":["AU","GB"],"is_corresponding":false,"raw_author_name":"Alex Ritchie","raw_affiliation_strings":["Australian Museum, Sydney, NSW, Australia","Department of Palaeontology , Natural History Museum , Cromwell Road , London , SW7 5BD UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Australian Museum, Sydney, NSW, Australia","institution_ids":["https://openalex.org/I1328215151"]},{"raw_affiliation_string":"Department of Palaeontology , Natural History Museum , Cromwell Road , London , SW7 5BD UK","institution_ids":["https://openalex.org/I1336856363"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5063404856"],"corresponding_institution_ids":["https://openalex.org/I1336856363"],"apc_list":null,"apc_paid":null,"fwci":0.4395,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.56603248,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":95},"biblio":{"volume":"54","issue":"1","first_page":"71","last_page":"80"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10268","display_name":"Developmental Biology and Gene Regulation","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10268","display_name":"Developmental Biology and Gene Regulation","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10955","display_name":"Paleontology and Evolutionary Biology","score":0.008799999952316284,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12417","display_name":"Morphological variations and asymmetry","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/vertebral-fusion","display_name":"vertebral fusion","score":0.9049999713897705},{"id":"https://openalex.org/keywords/homeotic-transformation","display_name":"homeotic transformation","score":0.7670000195503235},{"id":"https://openalex.org/keywords/hox-genes","display_name":"Hox genes","score":0.7450000047683716},{"id":"https://openalex.org/keywords/gene-misexpression","display_name":"gene misexpression","score":0.7900000214576721},{"id":"https://openalex.org/keywords/genomic-duplication","display_name":"genomic duplication","score":0.6169999837875366},{"id":"https://openalex.org/keywords/placoderms","display_name":"Placodermi","score":0.9929999709129333},{"id":"https://openalex.org/keywords/klippel-feil-syndrome","display_name":"Klippel-Feil syndrome","score":0.9599999785423279},{"id":"https://openalex.org/keywords/chondrichthyes","display_name":"Chondrichthyes","score":0.8169999718666077},{"id":"https://openalex.org/keywords/fossil-vertebrates","display_name":"fossil vertebrates","score":0.4449999928474426}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9126353859901428},{"id":"https://openalex.org/C46751350","wikidata":"https://www.wikidata.org/wiki/Q1939530","display_name":"Homeotic gene","level":4,"score":0.7677942514419556},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.6836411952972412},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.6194872260093689},{"id":"https://openalex.org/C121587040","wikidata":"https://www.wikidata.org/wiki/Q898769","display_name":"Homeobox","level":4,"score":0.6107804179191589},{"id":"https://openalex.org/C111039654","wikidata":"https://www.wikidata.org/wiki/Q253149","display_name":"Hox gene","level":4,"score":0.5958846211433411},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5324386358261108},{"id":"https://openalex.org/C2778961482","wikidata":"https://www.wikidata.org/wiki/Q25241","display_name":"Vertebrate","level":3,"score":0.5252587199211121},{"id":"https://openalex.org/C2781012678","wikidata":"https://www.wikidata.org/wiki/Q482853","display_name":"Vertebral column","level":2,"score":0.4881766438484192},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4118233323097229},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3945624530315399},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.3503198027610779},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.12595641613006592}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013131","descriptor_name":"Spine","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014714","descriptor_name":"Vertebrates","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D018398","descriptor_name":"Homeodomain Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018398","descriptor_name":"Homeodomain Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050939","descriptor_name":"Gene Fusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1387/ijdb.072508zj","doi":"https://doi.org/10.1387/ijdb.072508zj","is_oa":true,"landing_page_url":"https://doi.org/10.1387/ijdb.072508zj","pdf_url":"https://ijdb.ehu.eus/article/pdf/072508zj","source":{"id":"https://openalex.org/S47908780","display_name":"The International Journal of Developmental Biology","issn_l":"0214-6282","issn":["0214-6282","1696-3547"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","medline","norway-1","poland-70","russia-white-list-3"],"host_organization":"https://openalex.org/P4310321029","host_organization_name":"University of the Basque Country","host_organization_lineage":["https://openalex.org/P4310321029"],"host_organization_lineage_names":["University of the Basque Country"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International Journal of Developmental Biology","raw_type":"journal-article"},{"id":"pmid:19876847","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19876847","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International journal of developmental biology","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1387/ijdb.072508zj","doi":"https://doi.org/10.1387/ijdb.072508zj","is_oa":true,"landing_page_url":"https://doi.org/10.1387/ijdb.072508zj","pdf_url":"https://ijdb.ehu.eus/article/pdf/072508zj","source":{"id":"https://openalex.org/S47908780","display_name":"The International Journal of Developmental Biology","issn_l":"0214-6282","issn":["0214-6282","1696-3547"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","medline","norway-1","poland-70","russia-white-list-3"],"host_organization":"https://openalex.org/P4310321029","host_organization_name":"University of the Basque Country","host_organization_lineage":["https://openalex.org/P4310321029"],"host_organization_lineage_names":["University of the Basque Country"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The International Journal of Developmental Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320308760","display_name":"American Museum of Natural History","ror":"https://ror.org/03thb3e06"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2016352564.pdf","grobid_xml":"https://content.openalex.org/works/W2016352564.grobid-xml"},"referenced_works_count":82,"referenced_works":["https://openalex.org/W1528700601","https://openalex.org/W1544473728","https://openalex.org/W1812491935","https://openalex.org/W1905627141","https://openalex.org/W1963526989","https://openalex.org/W1967683961","https://openalex.org/W1974479082","https://openalex.org/W1977455818","https://openalex.org/W1986167653","https://openalex.org/W1992594924","https://openalex.org/W1992794884","https://openalex.org/W1993185405","https://openalex.org/W1995492560","https://openalex.org/W1995961386","https://openalex.org/W2002618386","https://openalex.org/W2003640994","https://openalex.org/W2021987019","https://openalex.org/W2026046334","https://openalex.org/W2029518592","https://openalex.org/W2029697129","https://openalex.org/W2030564922","https://openalex.org/W2033132398","https://openalex.org/W2035318618","https://openalex.org/W2038890085","https://openalex.org/W2039359249","https://openalex.org/W2039538470","https://openalex.org/W2047405437","https://openalex.org/W2048534563","https://openalex.org/W2049176937","https://openalex.org/W2052923559","https://openalex.org/W2055641673","https://openalex.org/W2057806566","https://openalex.org/W2059586085","https://openalex.org/W2064903455","https://openalex.org/W2064953286","https://openalex.org/W2067520140","https://openalex.org/W2074765204","https://openalex.org/W2077032415","https://openalex.org/W2077338251","https://openalex.org/W2080200696","https://openalex.org/W2080461216","https://openalex.org/W2082040849","https://openalex.org/W2082150954","https://openalex.org/W2084489136","https://openalex.org/W2084779855","https://openalex.org/W2095375021","https://openalex.org/W2096859263","https://openalex.org/W2101723071","https://openalex.org/W2103056085","https://openalex.org/W2112780227","https://openalex.org/W2113698201","https://openalex.org/W2119666376","https://openalex.org/W2122851562","https://openalex.org/W2124800909","https://openalex.org/W2127493628","https://openalex.org/W2127678679","https://openalex.org/W2128665076","https://openalex.org/W2131714689","https://openalex.org/W2134101898","https://openalex.org/W2134692197","https://openalex.org/W2135123683","https://openalex.org/W2137564027","https://openalex.org/W2146810839","https://openalex.org/W2152075687","https://openalex.org/W2153127129","https://openalex.org/W2157245632","https://openalex.org/W2158078570","https://openalex.org/W2158308390","https://openalex.org/W2158600078","https://openalex.org/W2186817199","https://openalex.org/W2222863226","https://openalex.org/W2232348025","https://openalex.org/W2238259695","https://openalex.org/W2291238786","https://openalex.org/W2330789770","https://openalex.org/W2337851558","https://openalex.org/W2477797092","https://openalex.org/W2554660023","https://openalex.org/W3216951775","https://openalex.org/W4388321741","https://openalex.org/W7118125414","https://openalex.org/W7140253956"],"related_works":["https://openalex.org/W2028343201","https://openalex.org/W2132283515","https://openalex.org/W1856994936","https://openalex.org/W1995945638","https://openalex.org/W2168668046","https://openalex.org/W1974598621","https://openalex.org/W2080200696","https://openalex.org/W2076112203","https://openalex.org/W4390504476","https://openalex.org/W338042875"],"abstract_inverted_index":{"Development":[0],"of":[1,10,22,25,54,57,99,121,139,170,181,198,207,213,218,227,251,259,264],"the":[2,16,32,67,84,96,113,126,130,135,155,167,173,190,196,199,204,211,216,225,244,257],"vertebral":[3,51,61,214],"column":[4,33],"is":[5],"controlled":[6],"by":[7],"a":[8],"complex":[9,128],"pleiotropic":[11],"and":[12,18,28,38,44,82,147,160,163,166,210,231,241,263],"polygenetic":[13],"phenomena,":[14],"in":[15,48,50,129,152,158,172,220,229,254],"mouse":[17,37,230],"chick":[19,232],"regulating":[20],"formation":[21],"different":[23],"parts":[24,56],"individual":[26,58],"vertebrae":[27,59],"morphological":[29],"identity":[30],"along":[31],"(Hox":[34],"code).":[35],"In":[36],"chick,":[39],"experimental":[40],"misexpression,":[41],"including":[42],"upstream":[43],"downstream":[45],"genes,":[46],"results":[47],"shifts":[49],"identity,":[52],"loss":[53],"particular":[55],"or":[60],"fusion.":[62],"Axial":[63],"skeleton":[64],"homologies":[65],"across":[66,247],"Vertebrata":[68],"allow":[69],"these":[70,100,117,182,252,260],"observations":[71],"to":[72,75,184,237],"be":[73,235],"extended":[74],"taxa":[76,94],"such":[77],"as":[78],"Homo":[79],"sapiens,":[80],"Chondrichthyes":[81],"Placodermi,":[83],"latter":[85],"an":[86,122],"entirely":[87],"fossil":[88,93],"group.":[89,202],"Misexpression":[90],"phenotypes":[91,183,253],"among":[92],"illuminate":[95],"phylogenetic":[97],"history":[98],"regulatory":[101,186,208,261],"mechanisms.":[102],"Phenotypes":[103],"associated":[104],"with":[105,143],"genes":[106,209],"originating":[107],"via":[108],"genomic":[109,192,265],"duplication":[110,118,193],"can":[111,234],"determine":[112],"historical":[114],"depth":[115],"for":[116,125,137,243],"events.":[119],"Analysis":[120],"ontogenetic":[123],"sequence":[124],"occipital-synarcual":[127,150],"placoderm":[131],"Cowralepis":[132],"mclachlani":[133],"provides":[134],"basis":[136],"comparison":[138],"this":[140],"early":[141],"gnathostome":[142,191,200],"other":[144],"placoderms,":[145],"chondrichthyans":[146,239],"amniotes.":[148],"The":[149,179,249],"patterns":[151],"placoderms":[153],"parallel":[154],"phenotypic":[156,245],"misexpression":[157],"mice":[159],"chicks":[161],"(fusion":[162],"homeotic":[164],"mutation)":[165],"varying":[168],"degrees":[169],"fusion":[171,219,228],"Type":[174],"I-III":[175],"human":[176],"Klippel-Feil":[177],"syndrome.":[178],"association":[180],"Hoxd":[185],"complexes":[187],"indicates":[188,256],"that":[189,224],"occurred":[194],"at":[195],"base":[197],"stem":[201,221],"Given":[203],"conservative":[205],"nature":[206],"homology":[212],"elements,":[215],"presence":[217,250],"gnathostomes":[222],"implies":[223],"mechanism":[226],"models":[233],"extrapolated":[236],"extant":[238],"(testable)":[240],"accounts":[242],"similarity":[246],"gnathostomes.":[248],"fossils":[255],"antiquity":[258],"mechanisms":[262],"duplication.":[266]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
