{"id":"https://openalex.org/W2013713246","doi":"https://doi.org/10.1117/12.844151","title":"A comparison of tracking methods for swimming C. Elegans","display_name":"A comparison of tracking methods for swimming C. Elegans","publication_year":2010,"publication_date":"2010-03-04","ids":{"openalex":"https://openalex.org/W2013713246","doi":"https://doi.org/10.1117/12.844151","mag":"2013713246"},"language":"en","primary_location":{"id":"doi:10.1117/12.844151","doi":"https://doi.org/10.1117/12.844151","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.844151","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"},"volume":null,"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060737037","display_name":"Christophe Restif","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christophe Restif","raw_affiliation_strings":["Rutgers Univ. (United States)","Rutgers University, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rutgers Univ. (United States)","institution_ids":["https://openalex.org/I102322142"]},{"raw_affiliation_string":"Rutgers University, United States","institution_ids":["https://openalex.org/I102322142"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064437234","display_name":"Dimitris Metaxas","orcid":"https://orcid.org/0000-0001-7142-7640","observed_orcids":["https://orcid.org/0000-0001-7142-7640"]},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dimitris Metaxas","raw_affiliation_strings":["Rutgers Univ. (United States)","Rutgers University, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rutgers Univ. (United States)","institution_ids":["https://openalex.org/I102322142"]},{"raw_affiliation_string":"Rutgers University, United States","institution_ids":["https://openalex.org/I102322142"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I102322142"],"apc_list":null,"apc_paid":null,"fwci":1.0693,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.71450382,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"7623","issue":null,"first_page":"76232E","last_page":"76232E"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.5640000104904175,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.5640000104904175,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10331","display_name":"Video Surveillance and Tracking Methods","score":0.13989999890327454,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.12449999898672104,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/caenorhabditis-elegans","display_name":"Caenorhabditis elegans","score":0.9919999837875366},{"id":"https://openalex.org/keywords/worm-tracking","display_name":"worm tracking","score":0.8809999823570251},{"id":"https://openalex.org/keywords/swimming-motion","display_name":"swimming motion","score":0.7950000166893005},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"image segmentation","score":0.7749999761581421},{"id":"https://openalex.org/keywords/thresholding","display_name":"thresholding","score":0.8019999861717224},{"id":"https://openalex.org/keywords/low-level-vision","display_name":"low-level vision","score":0.6990000009536743},{"id":"https://openalex.org/keywords/articulated-models","display_name":"articulated models","score":0.8709999918937683},{"id":"https://openalex.org/keywords/image-preprocessing","display_name":"image preprocessing","score":0.5889999866485596},{"id":"https://openalex.org/keywords/animal-behavior-analysis","display_name":"animal behavior analysis","score":0.36399999260902405}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8246104717254639},{"id":"https://openalex.org/C191178318","wikidata":"https://www.wikidata.org/wiki/Q2256906","display_name":"Thresholding","level":3,"score":0.7660846710205078},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6824606657028198},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6583484411239624},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6440792679786682},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.6313121914863586},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6293126344680786},{"id":"https://openalex.org/C63882131","wikidata":"https://www.wikidata.org/wiki/Q17122954","display_name":"Strengths and weaknesses","level":2,"score":0.5239691138267517},{"id":"https://openalex.org/C104114177","wikidata":"https://www.wikidata.org/wiki/Q79782","display_name":"Motion (physics)","level":2,"score":0.4180183708667755},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32672107219696045},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.28603172302246094},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/12.844151","doi":"https://doi.org/10.1117/12.844151","is_oa":false,"landing_page_url":"https://doi.org/10.1117/12.844151","pdf_url":null,"source":{"id":"https://openalex.org/S183492911","display_name":"Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE","issn_l":"0277-786X","issn":["0277-786X","1996-756X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","norway-1"],"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"SPIE Proceedings","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2143931684","https://openalex.org/W1548653701","https://openalex.org/W2130760852","https://openalex.org/W2114853971","https://openalex.org/W2164857604","https://openalex.org/W2001941541","https://openalex.org/W7028444484","https://openalex.org/W163140310","https://openalex.org/W7111531208","https://openalex.org/W4416828818"],"abstract_inverted_index":{"Tracking":[0],"the":[1,111],"swimming":[2,82],"motion":[3],"of":[4,9,15,37,50,58,89,106,113],"C.":[5,115],"elegans":[6,116],"worms":[7],"is":[8],"high":[10],"interest":[11],"for":[12],"a":[13,86,114],"variety":[14],"research":[16],"projects":[17],"on":[18,110],"behavior":[19,107],"in":[20,71],"biology,":[21],"from":[22,34,47],"aging":[23],"to":[24,78,81,122,128,133],"mating":[25],"studies.":[26],"We":[27,84],"compare":[28],"six":[29],"different":[30],"tracking":[31],"methods,":[32,45],"derived":[33],"two":[35],"types":[36,49],"image":[38],"preprocessing,":[39],"namely":[40],"local":[41],"and":[42,46,55,100,118,131],"global":[43],"thresholding":[44],"three":[48,104],"segmentation":[51],"methods:":[52],"low-level":[53],"vision,":[54],"articulated":[56],"models":[57],"either":[59],"constant":[60],"or":[61],"varying":[62],"width.":[63],"All":[64],"these":[65,90],"methods":[66,91,124],"have":[67],"been":[68],"successfully":[69],"used":[70],"recent":[72],"related":[73],"works,":[74],"with":[75],"some":[76],"modifications":[77],"adapt":[79],"them":[80],"motions.":[83],"show":[85],"quantitative":[87],"comparison":[88],"using":[92],"computer-vision":[93],"measures.":[94],"To":[95],"discuss":[96],"their":[97],"relative":[98],"strengths":[99],"weaknesses,":[101],"we":[102],"consider":[103],"scenarios":[105],"studies,":[108],"depending":[109],"constraints":[112],"project,":[117],"give":[119],"suggestions":[120],"as":[121],"which":[123],"are":[125],"more":[126],"adapted":[127],"each":[129],"case,":[130],"how":[132],"further":[134],"improve":[135],"them.":[136]},"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-10-08T09:06:37.294493","created_date":"2016-06-24T00:00:00"}