{"id":"https://openalex.org/W201151408","doi":"https://doi.org/10.1117/3.831079.ch17","title":"Brain Image Analysis and Atlas Construction","display_name":"Brain Image Analysis and Atlas Construction","publication_year":2010,"publication_date":"2010-03-16","ids":{"openalex":"https://openalex.org/W201151408","doi":"https://doi.org/10.1117/3.831079.ch17","mag":"201151408"},"language":"en","primary_location":{"id":"doi:10.1117/3.831079.ch17","doi":"https://doi.org/10.1117/3.831079.ch17","is_oa":false,"landing_page_url":"https://doi.org/10.1117/3.831079.ch17","pdf_url":null,"source":{"id":"https://openalex.org/S4306463935","display_name":"SPIE eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Medical Imaging, Volume 2. Medical Image Processing and Analysis","raw_type":"book-chapter"},"volume":{"id":"https://openalex.org/W89283330","display_name":"Handbook of Medical Imaging, Volume 2. Medical Image Processing and Analysis"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100606557","display_name":"Paul M. Thompson","orcid":"https://orcid.org/0000-0002-4720-8867","observed_orcids":["https://orcid.org/0000-0002-4720-8867","https://orcid.org/0000-0003-2476-2803","https://orcid.org/0000-0002-2305-8438"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul Thompson","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009072281","display_name":"Michael S. Mega","orcid":"https://orcid.org/0000-0002-2155-864X","observed_orcids":["https://orcid.org/0000-0002-2155-864X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Mega","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083948964","display_name":"Katherine L. Narr","orcid":"https://orcid.org/0000-0002-9396-7936","observed_orcids":["https://orcid.org/0000-0002-9396-7936"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katherine Narr","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085955393","display_name":"Elizabeth R. Sowell","orcid":"https://orcid.org/0000-0001-7558-4280","observed_orcids":["https://orcid.org/0000-0001-7558-4280"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Elizabeth Sowell","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051169628","display_name":"Rebecca E. Blanton","orcid":"https://orcid.org/0000-0002-6440-7112","observed_orcids":["https://orcid.org/0000-0002-6440-7112"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rebecca Blanton","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5014949118","display_name":"Arthur W. Toga","orcid":"https://orcid.org/0000-0001-7902-3755","observed_orcids":["https://orcid.org/0000-0001-7902-3755","https://orcid.org/0000-0003-1454-8643"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Arthur Toga","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":10.7325,"has_fulltext":false,"cited_by_count":58,"citation_normalized_percentile":{"value":0.9868213,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"1061","last_page":"1129"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/brain-image-analysis","display_name":"brain image analysis","score":0.9929999709129333},{"id":"https://openalex.org/keywords/brain-atlas-construction","display_name":"brain atlas construction","score":0.8429999947547913},{"id":"https://openalex.org/keywords/image-registration","display_name":"image registration","score":0.7020000219345093},{"id":"https://openalex.org/keywords/brain-image-segmentation","display_name":"brain segmentation","score":0.8519999980926514},{"id":"https://openalex.org/keywords/tissue-classification","display_name":"tissue classification","score":0.8109999895095825},{"id":"https://openalex.org/keywords/shape-analysis","display_name":"shape analysis","score":0.8510000109672546},{"id":"https://openalex.org/keywords/pathology-detection","display_name":"pathology detection","score":0.859000027179718},{"id":"https://openalex.org/keywords/multimodal-neuroimaging","display_name":"multimodal neuroimaging","score":0.7139999866485596},{"id":"https://openalex.org/keywords/brain-mapping","display_name":"brain mapping","score":0.3100000023841858}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6120710372924805},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5407308340072632},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.5381138920783997},{"id":"https://openalex.org/C2780972224","wikidata":"https://www.wikidata.org/wiki/Q17047956","display_name":"Brain atlas","level":2,"score":0.5376497507095337},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.5371829271316528},{"id":"https://openalex.org/C2777526511","wikidata":"https://www.wikidata.org/wiki/Q691543","display_name":"Pace","level":2,"score":0.5255878567695618},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4986839294433594},{"id":"https://openalex.org/C77660652","wikidata":"https://www.wikidata.org/wiki/Q150971","display_name":"Computer graphics","level":2,"score":0.4809652864933014},{"id":"https://openalex.org/C3018390542","wikidata":"https://www.wikidata.org/wiki/Q1073","display_name":"Brain function","level":2,"score":0.4223182797431946},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.42092758417129517},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4100554585456848},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3779405951499939},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3417571187019348},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.33200153708457947},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.2563873827457428},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.23774337768554688},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.10665231943130493},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.10544538497924805},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1117/3.831079.ch17","doi":"https://doi.org/10.1117/3.831079.ch17","is_oa":false,"landing_page_url":"https://doi.org/10.1117/3.831079.ch17","pdf_url":null,"source":{"id":"https://openalex.org/S4306463935","display_name":"SPIE eBooks","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/P4310315543","host_organization_name":"SPIE","host_organization_lineage":["https://openalex.org/P4310315543"],"host_organization_lineage_names":["SPIE"],"type":"ebook platform"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Medical Imaging, Volume 2. Medical Image Processing and Analysis","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2168866216","https://openalex.org/W7099026940","https://openalex.org/W7096854743","https://openalex.org/W4410966403","https://openalex.org/W2478785928","https://openalex.org/W204906517","https://openalex.org/W7098866921","https://openalex.org/W2014364779","https://openalex.org/W1990577595","https://openalex.org/W2504998950"],"abstract_inverted_index":{"The":[0,54,190],"tremendous":[1],"pace":[2],"of":[3,26,56,67,139,241,251,258,293],"development":[4],"in":[5,88,144,172,211,260],"brain":[6,15,57,77,103,128,173,222,228,273,308],"imaging":[7,58,85,243,286],"technologies":[8],"has":[9],"revolutionized":[10],"our":[11],"ability":[12],"to":[13,23,71,123,135,155,159,227,237,329],"investigate":[14],"structure":[16,141],"and":[17,28,33,39,46,87,116,126,142,146,149,162,184,187,197,201,205,208,281,315,318,335],"function.":[18],"Techniques":[19],"are":[20,98,121,152,216,225,255],"now":[21],"available":[22],"capture":[24],"features":[25],"anatomy":[27,259],"function":[29,143],"at":[30],"both":[31],"molecular":[32],"whole-brain":[34],"scales,":[35],"mapping":[36],"neuronal":[37],"dynamics":[38],"gene":[40],"expression":[41],"as":[42,44,231,267],"well":[43],"growth":[45],"degenerative":[47],"processes":[48],"that":[49],"span":[50],"multiyear":[51],"time":[52],"scales.":[53],"number":[55],"investigations":[59],"is":[60,70],"also":[61,217,300],"increasing":[62],"exponentially.":[63],"A":[64],"major":[65],"goal":[66],"these":[68,94,157],"studies":[69],"analyze":[72],"how":[73],"the":[74,178,239,252],"dynamically":[75],"changing":[76],"varies":[78],"across":[79,83,313],"age,":[80],"gender,":[81],"disease,":[82],"multiple":[84],"modalities,":[86],"large":[89],"human":[90],"populations.":[91],"To":[92,283],"tackle":[93],"questions,":[95],"many":[96],"laboratories":[97],"using":[99],"sophisticated":[100],"algorithms":[101,133,295],"for":[102,194,219,278,303,338],"image":[104,112,131,174,229],"analysis.":[105],"Engineering":[106],"approaches":[107,191],"drawn":[108],"from":[109,246,332],"computer":[110,114],"vision,":[111],"analysis,":[113,175,207,230],"graphics,":[115],"artificial":[117],"intelligence":[118],"research":[119],"fields":[120],"required":[122],"manipulate,":[124],"analyze,":[125],"communicate":[127],"data.":[129],"Novel":[130],"analysis":[132],"continue":[134],"uncover":[136],"new":[137,285],"patterns":[138,158],"altered":[140],"individuals":[145,212,334],"clinical":[147,188],"populations,":[148],"mathematical":[150],"strategies":[151],"being":[153],"developed":[154],"relate":[156],"clinical,":[160],"demographic,":[161],"genetic":[163],"parameters.":[164],"In":[165],"this":[166],"chapter,":[167],"we":[168],"review":[169],"current":[170],"challenges":[171],"focusing":[176],"on":[177,270],"main":[179],"algorithms,":[180],"their":[181,185],"technical":[182],"foundations,":[183],"scientific":[186],"applications.":[189],"include":[192],"methods":[193],"automated":[195],"registration":[196,294],"segmentation,":[198],"anatomical":[199],"parameterization":[200],"modeling,":[202],"tissue":[203],"classification":[204],"shape":[206],"pathology":[209],"detection":[210],"or":[213,248],"groups.":[214],"Algorithms":[215],"described":[218],"generating":[220],"digital":[221],"atlases.":[223],"Atlases":[224],"fundamental":[226],"they":[232],"offer":[233],"a":[234,261,291,324,336],"powerful":[235],"framework":[236,337],"synthesize":[238],"results":[240],"disparate":[242],"studies.":[244],"Built":[245],"one":[247],"more":[249],"representations":[250,257],"brain,":[253],"atlases":[254,322],"annotated":[256],"3D":[262,326],"coordinate":[263,327],"system.":[264],"They":[265],"serve":[266],"standardized":[268,325],"templates":[269],"which":[271],"other":[272,304],"maps":[274,309],"can":[275,310],"be":[276,297,311],"overlaid,":[277],"subsequent":[279],"comparison":[280],"integration.":[282],"align":[284],"data":[287],"with":[288],"an":[289],"atlas,":[290],"variety":[292],"may":[296],"employed":[298],"(see":[299],"Chapter":[301],"8":[302],"applications).":[305],"Once":[306],"registered,":[307],"pooled":[312],"subjects":[314],"combined":[316],"mathematically":[317],"statistically.":[319],"As":[320],"such,":[321],"provide":[323],"system":[328],"express":[330],"observations":[331],"different":[333],"interlaboratory":[339],"communication.":[340]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-10-13T10:08:12.033832","created_date":"2016-06-24T00:00:00"}
