{"id":"https://openalex.org/W2011309358","doi":"https://doi.org/10.1093/femsle/fnu055","title":"The draft genome sequence of Xanthomonas species strain Nyagatare, isolated from diseased bean in Rwanda","display_name":"The draft genome sequence of Xanthomonas species strain Nyagatare, isolated from diseased bean in Rwanda","publication_year":2015,"publication_date":"2015-01-09","ids":{"openalex":"https://openalex.org/W2011309358","doi":"https://doi.org/10.1093/femsle/fnu055","mag":"2011309358","pmid":"https://pubmed.ncbi.nlm.nih.gov/25688063"},"language":"en","primary_location":{"id":"doi:10.1093/femsle/fnu055","doi":"https://doi.org/10.1093/femsle/fnu055","is_oa":false,"landing_page_url":"https://doi.org/10.1093/femsle/fnu055","pdf_url":null,"source":{"id":"https://openalex.org/S34954451","display_name":"FEMS Microbiology Letters","issn_l":"0378-1097","issn":["0378-1097","1574-6968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS Microbiology Letters","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hdl.handle.net/10568/56999","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113628403","display_name":"Valente Aritua","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210118691","display_name":"International Center for Tropical Agriculture","ror":"https://ror.org/02qk18s08","country_code":"KE","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I4210118691","https://openalex.org/I64492213"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Valente Aritua","raw_affiliation_strings":["International Center for Tropical Agriculture, P.O. Box 6247, Kampala, Uganda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Center for Tropical Agriculture, P.O. Box 6247, Kampala, Uganda","institution_ids":["https://openalex.org/I4210118691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027866744","display_name":"Augustine Musoni","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210121091","display_name":"Rwanda Agriculture Board","ror":"https://ror.org/03nkkb025","country_code":"RW","type":"government","lineage":["https://openalex.org/I4210121091"]}],"countries":["RW"],"is_corresponding":false,"raw_author_name":"Augustine Musoni","raw_affiliation_strings":["Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda","institution_ids":["https://openalex.org/I4210121091"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054148932","display_name":"Alice Kabeja","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210121091","display_name":"Rwanda Agriculture Board","ror":"https://ror.org/03nkkb025","country_code":"RW","type":"government","lineage":["https://openalex.org/I4210121091"]}],"countries":["RW"],"is_corresponding":false,"raw_author_name":"Alice Kabeja","raw_affiliation_strings":["Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda","institution_ids":["https://openalex.org/I4210121091"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073837910","display_name":"Louis Butare","orcid":"https://orcid.org/0000-0001-7885-4004","observed_orcids":["https://orcid.org/0000-0001-7885-4004"]},"institutions":[{"id":"https://openalex.org/I4210121091","display_name":"Rwanda Agriculture Board","ror":"https://ror.org/03nkkb025","country_code":"RW","type":"government","lineage":["https://openalex.org/I4210121091"]}],"countries":["RW"],"is_corresponding":false,"raw_author_name":"Louis Butare","raw_affiliation_strings":["Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda","institution_ids":["https://openalex.org/I4210121091"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085365924","display_name":"Floride Mukamuhirwa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210121091","display_name":"Rwanda Agriculture Board","ror":"https://ror.org/03nkkb025","country_code":"RW","type":"government","lineage":["https://openalex.org/I4210121091"]}],"countries":["RW"],"is_corresponding":false,"raw_author_name":"Floride Mukamuhirwa","raw_affiliation_strings":["Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda","institution_ids":["https://openalex.org/I4210121091"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071260295","display_name":"Daphrose Gahakwa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210121091","display_name":"Rwanda Agriculture Board","ror":"https://ror.org/03nkkb025","country_code":"RW","type":"government","lineage":["https://openalex.org/I4210121091"]}],"countries":["RW"],"is_corresponding":false,"raw_author_name":"Daphrose Gahakwa","raw_affiliation_strings":["Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rwanda Agriculture Board, P.O. Box 5016, Kigali, Rwanda","institution_ids":["https://openalex.org/I4210121091"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042367902","display_name":"Fred Kato","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210118691","display_name":"International Center for Tropical Agriculture","ror":"https://ror.org/02qk18s08","country_code":"KE","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I4210118691","https://openalex.org/I64492213"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Fred Kato","raw_affiliation_strings":["International Center for Tropical Agriculture, P.O. Box 6247, Kampala, Uganda"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Center for Tropical Agriculture, P.O. Box 6247, Kampala, Uganda","institution_ids":["https://openalex.org/I4210118691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110477002","display_name":"Mathew M. Abang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mathew M. Abang","raw_affiliation_strings":["FAO Sub-regional Office for Eastern Africa, P.O. Box 5536, Addis Ababa, Ethiopia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"FAO Sub-regional Office for Eastern Africa, P.O. Box 5536, Addis Ababa, Ethiopia","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088492971","display_name":"Robin Buruchara","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210118691","display_name":"International Center for Tropical Agriculture","ror":"https://ror.org/02qk18s08","country_code":"KE","type":"nonprofit","lineage":["https://openalex.org/I1286583668","https://openalex.org/I4210118691","https://openalex.org/I64492213"]}],"countries":["KE"],"is_corresponding":false,"raw_author_name":"Robin Buruchara","raw_affiliation_strings":["International Centre for Tropical Agriculture (CIAT), P.O. Box 823-00621, Nairobi, Kenya"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Centre for Tropical Agriculture (CIAT), P.O. Box 823-00621, Nairobi, Kenya","institution_ids":["https://openalex.org/I4210118691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072214159","display_name":"Melanie Sapp","orcid":"https://orcid.org/0000-0002-0817-5425","observed_orcids":["https://orcid.org/0000-0002-0817-5425"]},"institutions":[{"id":"https://openalex.org/I1287240670","display_name":"Fera Science (United Kingdom)","ror":"https://ror.org/05299tt38","country_code":"GB","type":"company","lineage":["https://openalex.org/I1287240670","https://openalex.org/I1326803253","https://openalex.org/I2802373619","https://openalex.org/I4210137385"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Melanie Sapp","raw_affiliation_strings":["International Development, The Food and Environment Research Agency, Sand Hutton, York, YO41 1LZ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Development, The Food and Environment Research Agency, Sand Hutton, York, YO41 1LZ, UK","institution_ids":["https://openalex.org/I1287240670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083208590","display_name":"Jamie Harrison","orcid":"https://orcid.org/0000-0002-8314-9411","observed_orcids":["https://orcid.org/0000-0002-8314-9411"]},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"James Harrison","raw_affiliation_strings":["Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK","institution_ids":["https://openalex.org/I23923803"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072609421","display_name":"David John Studholme","orcid":"https://orcid.org/0000-0002-3010-6637","observed_orcids":["https://orcid.org/0000-0002-3010-6637"]},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"David J. Studholme","raw_affiliation_strings":["Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK d.j.studholme@exeter.ac.uk","Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK d.j.studholme@exeter.ac.uk","institution_ids":["https://openalex.org/I23923803"]},{"raw_affiliation_string":"Biosciences, University of Exeter, Exeter EX4 4QD, Devon, UK","institution_ids":["https://openalex.org/I23923803"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5104018289","display_name":"Julian Smith","orcid":"https://orcid.org/0000-0003-2942-3747","observed_orcids":["https://orcid.org/0000-0003-2942-3747"]},"institutions":[{"id":"https://openalex.org/I1287240670","display_name":"Fera Science (United Kingdom)","ror":"https://ror.org/05299tt38","country_code":"GB","type":"company","lineage":["https://openalex.org/I1287240670","https://openalex.org/I1326803253","https://openalex.org/I2802373619","https://openalex.org/I4210137385"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Julian Smith","raw_affiliation_strings":["International Development, The Food and Environment Research Agency, Sand Hutton, York, YO41 1LZ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"International Development, The Food and Environment Research Agency, Sand Hutton, York, YO41 1LZ, UK","institution_ids":["https://openalex.org/I1287240670"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5072609421"],"corresponding_institution_ids":["https://openalex.org/I23923803"],"apc_list":{"value":2500,"currency":"GBP","value_usd":3297},"apc_paid":null,"fwci":1.8861,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.85156005,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"362","issue":"4","first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/xanthomonas","display_name":"Xanthomonas","score":0.9629999995231628},{"id":"https://openalex.org/keywords/draft-genome-sequence","display_name":"draft genome sequence","score":0.7409999966621399},{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":0.8500000238418579},{"id":"https://openalex.org/keywords/agrobacterium","display_name":"Agrobacterium","score":0.8859999775886536},{"id":"https://openalex.org/keywords/rhizobium","display_name":"Rhizobium","score":0.9929999709129333},{"id":"https://openalex.org/keywords/type-iii-effectors","display_name":"type III effectors","score":0.9779999852180481},{"id":"https://openalex.org/keywords/plant-pathogens","display_name":"plant pathogens","score":0.734000027179718},{"id":"https://openalex.org/keywords/disease-outbreaks","display_name":"outbreak","score":0.5559999942779541}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8479278087615967},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.769849419593811},{"id":"https://openalex.org/C2780746887","wikidata":"https://www.wikidata.org/wiki/Q140652","display_name":"Xanthomonas","level":3,"score":0.7388043403625488},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.7273759841918945},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6638198494911194},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.4858236312866211},{"id":"https://openalex.org/C157887575","wikidata":"https://www.wikidata.org/wiki/Q417216","display_name":"Insertion sequence","level":5,"score":0.4771413505077362},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4752749502658844},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.36550647020339966},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.1956653594970703},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005810","descriptor_name":"Multigene Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007887","descriptor_name":"Fabaceae","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010935","descriptor_name":"Plant Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D012432","descriptor_name":"Rwanda","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014974","descriptor_name":"Xanthomonas","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014974","descriptor_name":"Xanthomonas","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014974","descriptor_name":"Xanthomonas","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058947","descriptor_name":"Bacterial Secretion Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/femsle/fnu055","doi":"https://doi.org/10.1093/femsle/fnu055","is_oa":false,"landing_page_url":"https://doi.org/10.1093/femsle/fnu055","pdf_url":null,"source":{"id":"https://openalex.org/S34954451","display_name":"FEMS Microbiology Letters","issn_l":"0378-1097","issn":["0378-1097","1574-6968"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-3","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS Microbiology Letters","raw_type":"journal-article"},{"id":"pmid:25688063","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25688063","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"FEMS microbiology letters","raw_type":"Journal Article"},{"id":"pmh:oai:cgspace.cgiar.org:10568/56999","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/10568/56999","pdf_url":null,"source":{"id":"https://openalex.org/S4306402055","display_name":"CGSPace A Repository of Agricultural Research Outputs (Consultative Group for International Agricultural Research)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1286583668","host_organization_name":"CGIAR","host_organization_lineage":["https://openalex.org/I1286583668"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Aritua, Valent; Musoni, Augustine; Kato, Fred; Abang, Mathew M.; Buruchara, Robin; Sapp, Melanie; Harrison, James; Studholme, David J.; Smith, Julian. 2014. The draft genome sequence of Xanthomonas species strain Nyagatare, isolated from diseased bean in Rwanda. FEMS Microbiology Letters Published online.","raw_type":"Journal Article"},{"id":"pmh:oai:figshare.com:article/29704916","doi":null,"is_oa":false,"landing_page_url":"https://figshare.com/articles/journal_contribution/The_draft_genome_sequence_of_Xanthomonas_species_strain_Nyagatare_isolated_from_diseased_bean_in_Rwanda/29704916","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:ore.exeter.ac.uk:10871/16548","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/10871/16548","pdf_url":null,"source":{"id":"https://openalex.org/S4306401998","display_name":"Open Research Exeter (University of Exeter)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I23923803","host_organization_name":"University of Exeter","host_organization_lineage":["https://openalex.org/I23923803"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"pmh:oai:cgspace.cgiar.org:10568/56999","doi":null,"is_oa":true,"landing_page_url":"https://hdl.handle.net/10568/56999","pdf_url":null,"source":{"id":"https://openalex.org/S4306402055","display_name":"CGSPace A Repository of Agricultural Research Outputs (Consultative Group for International Agricultural Research)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1286583668","host_organization_name":"CGIAR","host_organization_lineage":["https://openalex.org/I1286583668"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Aritua, Valent; Musoni, Augustine; Kato, Fred; Abang, Mathew M.; Buruchara, Robin; Sapp, Melanie; Harrison, James; Studholme, David J.; Smith, Julian. 2014. The draft genome sequence of Xanthomonas species strain Nyagatare, isolated from diseased bean in Rwanda. FEMS Microbiology Letters Published online.","raw_type":"Journal Article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.6875}],"study_designs":[],"awards":[{"id":"https://openalex.org/G6761302262","display_name":null,"funder_award_id":"BB/J011568/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G8838988802","display_name":null,"funder_award_id":"1592329","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1965379264","https://openalex.org/W1978399016","https://openalex.org/W2016605860","https://openalex.org/W2017733245","https://openalex.org/W2033095314","https://openalex.org/W2070410465","https://openalex.org/W2081546226","https://openalex.org/W2088790569","https://openalex.org/W2091030812","https://openalex.org/W2095685450","https://openalex.org/W2096375646","https://openalex.org/W2100353117","https://openalex.org/W2119192377","https://openalex.org/W2119888547","https://openalex.org/W2126951229","https://openalex.org/W2129933858","https://openalex.org/W2144775551","https://openalex.org/W2152207030","https://openalex.org/W2155201605","https://openalex.org/W2160679365","https://openalex.org/W2160969485","https://openalex.org/W2278926556"],"related_works":["https://openalex.org/W7100623434","https://openalex.org/W6903855308","https://openalex.org/W1984179069","https://openalex.org/W7097515454","https://openalex.org/W7047611989","https://openalex.org/W4320485760","https://openalex.org/W7097919612","https://openalex.org/W2081984649","https://openalex.org/W2254574854","https://openalex.org/W3089924450"],"abstract_inverted_index":{"We":[0],"announce":[1],"the":[2,22,99,132],"genome":[3,25,82,100],"sequence":[4,46,52,101],"for":[5,108,112],"Xanthomonas":[6,31],"species":[7,32],"strain":[8,20],"Nyagatare,":[9],"isolated":[10],"from":[11,74],"beans":[12,118],"showing":[13],"unusual":[14],"disease":[15,133],"symptoms":[16],"in":[17],"Rwanda.":[18],"This":[19],"represents":[21],"first":[23],"sequenced":[24],"belonging":[26],"to":[27,54,70],"an":[28],"as-yet":[29],"undescribed":[30],"known":[33,88],"as":[34],"species-level":[35],"clade":[36],"1.":[37],"It":[38],"has":[39],"at":[40],"least":[41,65],"100":[42],"kb":[43],"of":[44,76,85,98,105,117,123],"genomic":[45,67],"that":[47],"shows":[48],"little":[49],"or":[50,78],"no":[51],"similarity":[53],"other":[55],"xanthomonads,":[56],"including":[57],"a":[58,124],"unique":[59],"lipopolysaccharide":[60],"synthesis":[61],"gene":[62],"cluster.":[63],"At":[64],"one":[66],"region":[68],"appears":[69],"have":[71],"been":[72],"acquired":[73],"relatives":[75],"Agrobacterium":[77],"Rhizobium":[79],"species.":[80],"The":[81],"encodes":[83],"homologues":[84],"only":[86],"three":[87],"type-three":[89],"secretion":[90],"system":[91],"effectors:":[92],"AvrBs2,":[93],"XopF1":[94],"and":[95,110,119,131],"AvrXv4.":[96],"Availability":[97],"will":[102],"facilitate":[103,120],"development":[104],"molecular":[106],"tools":[107],"detection":[109],"diagnostics":[111],"this":[113,129],"newly":[114],"discovered":[115],"pathogen":[116,130],"epidemiological":[121],"investigations":[122],"potential":[125],"causal":[126],"link":[127],"between":[128],"outbreak.":[134]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
