{"id":"https://openalex.org/W2010568971","doi":"https://doi.org/10.3109/19401736.2014.930839","title":"The complete mitochondrial genome of Tirumala limniace (Lepidoptera: Nymphalidae: Danainae)","display_name":"The complete mitochondrial genome of Tirumala limniace (Lepidoptera: Nymphalidae: Danainae)","publication_year":2014,"publication_date":"2014-06-30","ids":{"openalex":"https://openalex.org/W2010568971","doi":"https://doi.org/10.3109/19401736.2014.930839","mag":"2010568971","pmid":"https://pubmed.ncbi.nlm.nih.gov/24975850"},"language":"fr","primary_location":{"id":"doi:10.3109/19401736.2014.930839","doi":"https://doi.org/10.3109/19401736.2014.930839","is_oa":false,"landing_page_url":"https://doi.org/10.3109/19401736.2014.930839","pdf_url":null,"source":{"id":"https://openalex.org/S4210196298","display_name":"Mitochondrial DNA Part A","issn_l":"2470-1394","issn":["2470-1394","2470-1408"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","medline","norway-1"],"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547","https://openalex.org/P4310320449"],"host_organization_lineage_names":["Taylor & Francis","Informa"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mitochondrial DNA Part A","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050503911","display_name":"Shanshan Gan","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4472751","display_name":"Anhui Normal University","ror":"https://ror.org/05fsfvw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4472751"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanshan Gan","raw_affiliation_strings":["Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","Laboratory of Molecular Evolution and Biodiversity , College of Life Sciences, Anhui Normal University , Wuhu , People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4472751"]},{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity , College of Life Sciences, Anhui Normal University , Wuhu , People's Republic of China","institution_ids":["https://openalex.org/I4472751"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100752507","display_name":"Yanhong Chen","orcid":"https://orcid.org/0000-0002-8106-9709","observed_orcids":["https://orcid.org/0000-0002-8106-9709"]},"institutions":[{"id":"https://openalex.org/I4472751","display_name":"Anhui Normal University","ror":"https://ror.org/05fsfvw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4472751"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanhong Chen","raw_affiliation_strings":["Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4472751"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009606560","display_name":"Ni Zuo","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4472751","display_name":"Anhui Normal University","ror":"https://ror.org/05fsfvw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4472751"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ni Zuo","raw_affiliation_strings":["Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4472751"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074700160","display_name":"Chenchen Xia","orcid":"https://orcid.org/0000-0002-1459-8694","observed_orcids":["https://orcid.org/0000-0002-1459-8694"]},"institutions":[{"id":"https://openalex.org/I4472751","display_name":"Anhui Normal University","ror":"https://ror.org/05fsfvw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4472751"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenchen Xia","raw_affiliation_strings":["Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4472751"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102150106","display_name":"Jiasheng Hao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4472751","display_name":"Anhui Normal University","ror":"https://ror.org/05fsfvw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I4472751"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiasheng Hao","raw_affiliation_strings":["Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Molecular Evolution and Biodiversity, College of Life Sciences, Anhui Normal University, Wuhu, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4472751"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5102150106"],"corresponding_institution_ids":["https://openalex.org/I4472751"],"apc_list":null,"apc_paid":null,"fwci":0.9955,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.75085114,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":96},"biblio":{"volume":"27","issue":"2","first_page":"1096","last_page":"1098"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11974","display_name":"Lepidoptera: Biology and Taxonomy","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11974","display_name":"Lepidoptera: Biology and Taxonomy","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.01860000006854534,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14378","display_name":"Entomological Studies and Ecology","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tirumala-limniace","display_name":"Tirumala limniace","score":1.0},{"id":"https://openalex.org/keywords/mitochondrial-genome","display_name":"mitochondrial genome","score":0.8640000224113464},{"id":"https://openalex.org/keywords/nymphalidae","display_name":"Nymphalidae","score":0.9070000052452087},{"id":"https://openalex.org/keywords/danainae","display_name":"Danainae","score":0.9909999966621399},{"id":"https://openalex.org/keywords/butterflies","display_name":"butterflies","score":0.39399999380111694},{"id":"https://openalex.org/keywords/protein-coding-genes","display_name":"protein-coding genes","score":0.8339999914169312},{"id":"https://openalex.org/keywords/trna-genes","display_name":"tRNA genes","score":0.9049999713897705},{"id":"https://openalex.org/keywords/ribosomal-dna","display_name":"ribosomal DNA","score":0.8299999833106995},{"id":"https://openalex.org/keywords/at-rich-regions","display_name":"A+T-rich region","score":0.8539999723434448},{"id":"https://openalex.org/keywords/codon-usage","display_name":"codon usage","score":0.7020000219345093},{"id":"https://openalex.org/keywords/intergenic-spacer","display_name":"intergenic spacer","score":0.7739999890327454},{"id":"https://openalex.org/keywords/trna-secondary-structure","display_name":"tRNA secondary structure","score":0.7250000238418579},{"id":"https://openalex.org/keywords/microsatellite-markers","display_name":"microsatellite markers","score":0.6769999861717224}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8316924571990967},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.7089793682098389},{"id":"https://openalex.org/C195139083","wikidata":"https://www.wikidata.org/wiki/Q3463539","display_name":"Intergenic region","level":4,"score":0.6989976167678833},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6849188804626465},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.630580484867096},{"id":"https://openalex.org/C153957851","wikidata":"https://www.wikidata.org/wiki/Q201448","display_name":"Transfer RNA","level":4,"score":0.6126978397369385},{"id":"https://openalex.org/C176990463","wikidata":"https://www.wikidata.org/wiki/Q1854186","display_name":"Start codon","level":4,"score":0.5915794372558594},{"id":"https://openalex.org/C20580545","wikidata":"https://www.wikidata.org/wiki/Q28354","display_name":"Stop codon","level":3,"score":0.5038678050041199},{"id":"https://openalex.org/C67905577","wikidata":"https://www.wikidata.org/wiki/Q215980","display_name":"Ribosomal RNA","level":3,"score":0.4992637634277344},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4648992121219635},{"id":"https://openalex.org/C512185932","wikidata":"https://www.wikidata.org/wiki/Q28745","display_name":"Nucleotide","level":3,"score":0.18274548649787903},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.156735360622406}],"mesh":[{"descriptor_ui":"D000077278","descriptor_name":"RNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077278","descriptor_name":"RNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077278","descriptor_name":"RNA, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007915","descriptor_name":"Lepidoptera","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012335","descriptor_name":"RNA, Ribosomal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012335","descriptor_name":"RNA, Ribosomal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012335","descriptor_name":"RNA, Ribosomal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012343","descriptor_name":"RNA, Transfer","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019476","descriptor_name":"Insect Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D024101","descriptor_name":"Mitochondrial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D050259","descriptor_name":"Genes, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D050259","descriptor_name":"Genes, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D050259","descriptor_name":"Genes, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3109/19401736.2014.930839","doi":"https://doi.org/10.3109/19401736.2014.930839","is_oa":false,"landing_page_url":"https://doi.org/10.3109/19401736.2014.930839","pdf_url":null,"source":{"id":"https://openalex.org/S4210196298","display_name":"Mitochondrial DNA Part A","issn_l":"2470-1394","issn":["2470-1394","2470-1408"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","medline","norway-1"],"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547","https://openalex.org/P4310320449"],"host_organization_lineage_names":["Taylor & Francis","Informa"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mitochondrial DNA Part A","raw_type":"journal-article"},{"id":"pmid:24975850","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24975850","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"sustainable_development_goals_aurora":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/15","display_name":"Life on land"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1579279218","https://openalex.org/W2001900053","https://openalex.org/W2002709402","https://openalex.org/W2010568971","https://openalex.org/W2016915920","https://openalex.org/W2023958924","https://openalex.org/W2045665739","https://openalex.org/W2049532393","https://openalex.org/W2079104220","https://openalex.org/W2092307605","https://openalex.org/W2098075949","https://openalex.org/W2122544737","https://openalex.org/W2410277243","https://openalex.org/W2757409693","https://openalex.org/W3151730712"],"related_works":["https://openalex.org/W2127112464","https://openalex.org/W1973092781","https://openalex.org/W2100776225","https://openalex.org/W2082497884","https://openalex.org/W1996864294","https://openalex.org/W2162549018","https://openalex.org/W2106654613","https://openalex.org/W1998747977","https://openalex.org/W2912466504","https://openalex.org/W2063949847"],"abstract_inverted_index":{"The":[0,91,131],"complete":[1,54],"mitochondrial":[2],"nucleotide":[3],"sequence":[4],"of":[5,72,80,110],"Tirumala":[6],"limniace":[7],"is":[8,45],"15,285":[9],"bp":[10,74,82,100,103,133,154,159,164],"in":[11,104],"size,":[12,105],"containing":[13],"typical":[14,119],"metazoan":[15],"37":[16,81],"genes:":[17],"13":[18,35],"protein-coding":[19],"genes":[20,27,65,94,117],"(PCGs),":[21],"22tRNA":[22],"genes,":[23],"2":[24],"ribosomal":[25],"RNA":[26],"and":[28,63,77,96,101,112,167],"one":[29],"noncoding":[30],"AT-rich":[31,135],"region.":[32],"All":[33,115],"the":[34,53,59,88,142,147],"PCGs":[36,51],"initiated":[37],"with":[38,67,106],"ATN,":[39],"except":[40,123],"for":[41,124],"COI":[42],"gene":[43],"which":[44,127],"started":[46],"by":[47,151],"CGA":[48],"codon.":[49],"Nine":[50],"use":[52],"termination":[55],"codon":[56],"(TAA),":[57],"whereas":[58],"COI,":[60],"COII,":[61],"ND4":[62],"ND5":[64],"end":[66],"single":[68],"T.":[69],"A":[70],"total":[71,79],"132":[73],"intergenic":[75],"spacers":[76],"a":[78,152,157,162],"overlapping":[83],"sequences":[84],"are":[85,98],"interspersed":[86],"throughout":[87],"whole":[89],"genome.":[90],"two":[92],"rRNA":[93],"(rrnL":[95],"rrnS)":[97],"1352":[99],"779":[102],"their":[107],"AT":[108],"contents":[109],"84.6%":[111],"85.5%,":[113],"respectively.":[114],"tRNA":[116],"display":[118],"secondary":[120],"cloverleaf":[121],"structures":[122],"trnS1":[125],"(AGN)":[126],"loses":[128],"DHU":[129],"arm.":[130],"438":[132],"long":[134],"region":[136],"contains":[137],"several":[138],"features":[139],"common":[140],"to":[141],"other":[143],"lepidopterans,":[144],"such":[145],"as":[146],"ATAGA":[148],"motif":[149],"followed":[150],"18":[153],"poly-T":[155,160],"stretch,":[156,161],"9":[158],"10":[163],"poly-A":[165],"stretch":[166],"some":[168],"microsatellite-like":[169],"(AT)n":[170],"elements.":[171]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2016-06-24T00:00:00"}
