{"id":"https://openalex.org/W2010309783","doi":"https://doi.org/10.1371/journal.pone.0117797","title":"Characterization of a Novel Plasmid, pMAH135, from Mycobacterium avium Subsp. hominissuis","display_name":"Characterization of a Novel Plasmid, pMAH135, from Mycobacterium avium Subsp. hominissuis","publication_year":2015,"publication_date":"2015-02-11","ids":{"openalex":"https://openalex.org/W2010309783","doi":"https://doi.org/10.1371/journal.pone.0117797","mag":"2010309783","pmid":"https://pubmed.ncbi.nlm.nih.gov/25671431","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4324632"},"language":"en","primary_location":{"id":"doi:10.1371/journal.pone.0117797","doi":"https://doi.org/10.1371/journal.pone.0117797","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0117797","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0117797&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0117797&type=printable","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001419098","display_name":"Kei\u2010ichi Uchiya","orcid":"https://orcid.org/0000-0001-9337-6354","observed_orcids":["https://orcid.org/0000-0001-9337-6354"]},"institutions":[{"id":"https://openalex.org/I96636082","display_name":"Meijo University","ror":"https://ror.org/04h42fc75","country_code":"JP","type":"education","lineage":["https://openalex.org/I96636082"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kei-ichi Uchiya","raw_affiliation_strings":["Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","institution_ids":["https://openalex.org/I96636082"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101813881","display_name":"Hiroyasu Takahashi","orcid":"https://orcid.org/0000-0003-3080-6833","observed_orcids":["https://orcid.org/0000-0003-3080-6833"]},"institutions":[{"id":"https://openalex.org/I4405284924","display_name":"Kainan Hospital","ror":"https://ror.org/04eyqnq44","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4405284924"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroyasu Takahashi","raw_affiliation_strings":["Department of Pharmacy, Kainan Hospital Aichi Prefectural Welfare Federation of Agricultural Cooperatives, Yatomi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Kainan Hospital Aichi Prefectural Welfare Federation of Agricultural Cooperatives, Yatomi, Japan","institution_ids":["https://openalex.org/I4405284924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032063684","display_name":"Taku Nakagawa","orcid":"https://orcid.org/0000-0002-4157-1112","observed_orcids":["https://orcid.org/0000-0002-4157-1112"]},"institutions":[{"id":"https://openalex.org/I4210137409","display_name":"National Hospital Organization","ror":"https://ror.org/03ntccx93","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210137409"]},{"id":"https://openalex.org/I4210162311","display_name":"Higashi Nagoya National Hospital","ror":"https://ror.org/05x2sza30","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Taku Nakagawa","raw_affiliation_strings":["Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan; Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan; Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]},{"raw_affiliation_string":"Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]},{"raw_affiliation_string":"Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001024350","display_name":"Tetsuya Yagi","orcid":"https://orcid.org/0000-0003-0655-1615","observed_orcids":["https://orcid.org/0000-0003-0655-1615"]},"institutions":[{"id":"https://openalex.org/I4210090647","display_name":"Nagoya University Hospital","ror":"https://ror.org/008zz8m46","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210090647"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tetsuya Yagi","raw_affiliation_strings":["Department of Infectious Diseases, Center of National University Hospital for Infection Control, Nagoya University Hospital, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Infectious Diseases, Center of National University Hospital for Infection Control, Nagoya University Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210090647"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Makoto Moriyama","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4405285478","display_name":"National Hospital Organization Toyohashi Medical Center","ror":"https://ror.org/05h4rp246","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210137409","https://openalex.org/I4405285478"]},{"id":"https://openalex.org/I96636082","display_name":"Meijo University","ror":"https://ror.org/04h42fc75","country_code":"JP","type":"education","lineage":["https://openalex.org/I96636082"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Makoto Moriyama","raw_affiliation_strings":["Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan; Department of Pharmacy, National Hospital Organization, Toyohashi Medical Center, Toyohashi, Japan","Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","Department of Pharmacy, National Hospital Organization, Toyohashi Medical Center, Toyohashi, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan; Department of Pharmacy, National Hospital Organization, Toyohashi Medical Center, Toyohashi, Japan","institution_ids":["https://openalex.org/I4405285478","https://openalex.org/I96636082"]},{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","institution_ids":["https://openalex.org/I96636082"]},{"raw_affiliation_string":"Department of Pharmacy, National Hospital Organization, Toyohashi Medical Center, Toyohashi, Japan","institution_ids":["https://openalex.org/I4405285478"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Takayuki Inagaki","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090647","display_name":"Nagoya University Hospital","ror":"https://ror.org/008zz8m46","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210090647"]},{"id":"https://openalex.org/I96636082","display_name":"Meijo University","ror":"https://ror.org/04h42fc75","country_code":"JP","type":"education","lineage":["https://openalex.org/I96636082"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takayuki Inagaki","raw_affiliation_strings":["Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan; Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan","Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan; Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210090647","https://openalex.org/I96636082"]},{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","institution_ids":["https://openalex.org/I96636082"]},{"raw_affiliation_string":"Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210090647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109326171","display_name":"Kazuya Ichikawa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210090647","display_name":"Nagoya University Hospital","ror":"https://ror.org/008zz8m46","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210090647"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuya Ichikawa","raw_affiliation_strings":["Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Nagoya University Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210090647"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018774922","display_name":"Toshiaki Nikai","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I96636082","display_name":"Meijo University","ror":"https://ror.org/04h42fc75","country_code":"JP","type":"education","lineage":["https://openalex.org/I96636082"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toshiaki Nikai","raw_affiliation_strings":["Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Faculty of Pharmacy, Meijo University, Nagoya, Japan","institution_ids":["https://openalex.org/I96636082"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108587373","display_name":"Kenji Ogawa","orcid":"https://orcid.org/0000-0002-4247-6862","observed_orcids":["https://orcid.org/0000-0002-4247-6862"]},"institutions":[{"id":"https://openalex.org/I4210137409","display_name":"National Hospital Organization","ror":"https://ror.org/03ntccx93","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210137409"]},{"id":"https://openalex.org/I4210162311","display_name":"Higashi Nagoya National Hospital","ror":"https://ror.org/05x2sza30","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kenji Ogawa","raw_affiliation_strings":["Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan; Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan; Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]},{"raw_affiliation_string":"Department of Clinical Research, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]},{"raw_affiliation_string":"Department of Pulmonary Medicine, National Hospital Organization, Higashi Nagoya National Hospital, Nagoya, Japan","institution_ids":["https://openalex.org/I4210137409","https://openalex.org/I4210162311"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5001419098"],"corresponding_institution_ids":["https://openalex.org/I96636082"],"apc_list":{"value":2382,"currency":"USD","value_usd":2382},"apc_paid":{"value":2382,"currency":"USD","value_usd":2382},"fwci":2.1007,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.85062033,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":98},"biblio":{"volume":"10","issue":"2","first_page":"e0117797","last_page":"e0117797"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mycobacterium-avium-subsp-hominissuis","display_name":"Mycobacterium avium subsp. hominissuis","score":0.9779999852180481},{"id":"https://openalex.org/keywords/mycobacterium-avium-complex","display_name":"Mycobacterium avium complex","score":0.8930000066757202},{"id":"https://openalex.org/keywords/pulmonary-mac-disease","display_name":"MAC pulmonary disease","score":0.9319999814033508},{"id":"https://openalex.org/keywords/type-vii-secretion-system","display_name":"type VII secretion system","score":0.9990000128746033},{"id":"https://openalex.org/keywords/multidrug-efflux-transporter","display_name":"multidrug efflux transporter","score":0.9890000224113464},{"id":"https://openalex.org/keywords/antimicrobial-resistance","display_name":"antimicrobial resistance","score":0.8309999704360962},{"id":"https://openalex.org/keywords/host-specificity","display_name":"host specificity","score":0.9240000247955322},{"id":"https://openalex.org/keywords/variable-number-of-tandem-repeats","display_name":"variable number tandem repeats","score":0.765999972820282},{"id":"https://openalex.org/keywords/pig-isolates","display_name":"pig isolates","score":0.5120000243186951},{"id":"https://openalex.org/keywords/hiv-coinfection","display_name":"HIV coinfection","score":0.5360000133514404}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7822962999343872},{"id":"https://openalex.org/C22744801","wikidata":"https://www.wikidata.org/wiki/Q172778","display_name":"Plasmid","level":3,"score":0.762589693069458},{"id":"https://openalex.org/C2775961462","wikidata":"https://www.wikidata.org/wiki/Q6946984","display_name":"Mycobacterium avium-intracellulare infection","level":4,"score":0.6676226854324341},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.549591064453125},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5145870447158813},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5046261548995972},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.4233388304710388},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.4149303436279297},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.41344618797302246},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3117850720882416},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.15397030115127563}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008171","descriptor_name":"Lung Diseases","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D010080","descriptor_name":"Oxazoles","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015269","descriptor_name":"Mycobacterium avium Complex","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015269","descriptor_name":"Mycobacterium avium Complex","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015269","descriptor_name":"Mycobacterium avium Complex","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015270","descriptor_name":"Mycobacterium avium-intracellulare Infection","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D018598","descriptor_name":"Minisatellite Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1371/journal.pone.0117797","doi":"https://doi.org/10.1371/journal.pone.0117797","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0117797","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0117797&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},{"id":"pmid:25671431","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25671431","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PloS one","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4324632","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC4324632/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLoS One","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:20937988c55f48cdbcd3a6bdfdbd603a","doi":null,"is_oa":true,"landing_page_url":"https://doaj.org/article/20937988c55f48cdbcd3a6bdfdbd603a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PLoS ONE, Vol 10, Iss 2, p e0117797 (2015)","raw_type":"article"},{"id":"pmh:oai:figshare.com:article/1323289","doi":null,"is_oa":true,"landing_page_url":"https://figshare.com/articles/dataset/Characterization_of_a_Novel_Plasmid_pMAH135_from_Mycobacterium_avium_Subsp_hominissuis_/1323289","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1371/journal.pone.0117797","doi":"https://doi.org/10.1371/journal.pone.0117797","is_oa":true,"landing_page_url":"https://doi.org/10.1371/journal.pone.0117797","pdf_url":"https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0117797&type=printable","source":{"id":"https://openalex.org/S202381698","display_name":"PLoS ONE","issn_l":"1932-6203","issn":["1932-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","cwts-core","doaj","dongbi-c","doyens","erih-plus","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310315706","host_organization_name":"Public Library of Science","host_organization_lineage":["https://openalex.org/P4310315706"],"host_organization_lineage_names":["Public Library of Science"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PLOS ONE","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.9537000060081482,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G2282893742","display_name":"Comparative genome analysis of nontuberculous mycobacteria and its clinical application","funder_award_id":"24590164","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2010309783.pdf","grobid_xml":"https://content.openalex.org/works/W2010309783.grobid-xml"},"referenced_works_count":59,"referenced_works":["https://openalex.org/W90996600","https://openalex.org/W1532814292","https://openalex.org/W1893229642","https://openalex.org/W1967042781","https://openalex.org/W1968999800","https://openalex.org/W1971129779","https://openalex.org/W1971995936","https://openalex.org/W1974305305","https://openalex.org/W1975568475","https://openalex.org/W1981942927","https://openalex.org/W1982168502","https://openalex.org/W1982826700","https://openalex.org/W1984646060","https://openalex.org/W1992956599","https://openalex.org/W1997511314","https://openalex.org/W1999604235","https://openalex.org/W2000304849","https://openalex.org/W2006128966","https://openalex.org/W2018043634","https://openalex.org/W2019198879","https://openalex.org/W2028880520","https://openalex.org/W2032510602","https://openalex.org/W2056695145","https://openalex.org/W2057740405","https://openalex.org/W2058312898","https://openalex.org/W2065380874","https://openalex.org/W2078178166","https://openalex.org/W2092866615","https://openalex.org/W2097040380","https://openalex.org/W2098107406","https://openalex.org/W2098741870","https://openalex.org/W2100369468","https://openalex.org/W2102737482","https://openalex.org/W2105574566","https://openalex.org/W2106192857","https://openalex.org/W2115640526","https://openalex.org/W2121603293","https://openalex.org/W2127646692","https://openalex.org/W2130162410","https://openalex.org/W2134739228","https://openalex.org/W2135524542","https://openalex.org/W2138442694","https://openalex.org/W2144642571","https://openalex.org/W2147185188","https://openalex.org/W2149452073","https://openalex.org/W2151874196","https://openalex.org/W2153547901","https://openalex.org/W2154293774","https://openalex.org/W2155186392","https://openalex.org/W2158023121","https://openalex.org/W2158564060","https://openalex.org/W2159064100","https://openalex.org/W2168197730","https://openalex.org/W2169929748","https://openalex.org/W2405978957","https://openalex.org/W2470594388","https://openalex.org/W2613703036","https://openalex.org/W4247545245","https://openalex.org/W4254419430"],"related_works":["https://openalex.org/W1984646060","https://openalex.org/W3015703741","https://openalex.org/W2519126802","https://openalex.org/W7098345403","https://openalex.org/W1992716990","https://openalex.org/W2339592118","https://openalex.org/W4382182658","https://openalex.org/W4411056383","https://openalex.org/W4206124710","https://openalex.org/W7098091262"],"abstract_inverted_index":{"Mycobacterium":[0],"avium":[1,47,71,96],"complex":[2],"(MAC)":[3],"causes":[4,54],"mainly":[5],"two":[6],"types":[7],"of":[8,40,52,65,69,87,111,121,135,165,173,179,195,262,274,282],"disease.":[9,106],"The":[10,27,107,260],"first":[11],"is":[12,29,43],"disseminated":[13],"disease":[14,31,206],"in":[15,32,56,61,99,133,162,200,209,221,240],"immunocompromised":[16],"hosts,":[17],"such":[18],"as":[19,58,60],"individuals":[20,33],"infected":[21],"by":[22],"human":[23],"immunodeficiency":[24],"virus":[25],"(HIV).":[26],"second":[28],"pulmonary":[30,104,204],"without":[34],"systemic":[35],"immunosuppression,":[36],"and":[37,73,84,123,153,183,255],"the":[38,66,82,163,174,192,215,245,271,279],"incidence":[39],"this":[41,263],"type":[42,154],"increasing":[44],"worldwide.":[45],"M.":[46,70,95,252],"subsp.":[48],"hominissuis,":[49],"a":[50,88,241],"component":[51],"MAC,":[53],"infection":[55,72],"pigs":[57,184],"well":[59],"humans.":[62],"Many":[63],"aspects":[64],"different":[67],"modes":[68],"its":[74,136],"host":[75,280],"specificity":[76,281],"remain":[77],"unclear.":[78],"Here,":[79],"we":[80],"report":[81],"characteristics":[83],"complete":[85],"sequence":[86,147],"novel":[89],"plasmid,":[90],"designated":[91],"pMAH135,":[92],"derived":[93],"from":[94,181,203,211,223],"strain":[97],"TH135":[98],"an":[100,115],"HIV-negative":[101],"patient":[102],"with":[103,114,146,251],"MAC":[105,205,275,283],"pMAH135":[108,189,236,246,267],"plasmid":[109,130,247],"consists":[110],"194,711":[112],"nucleotides":[113],"average":[116],"G":[117],"+":[118],"C":[119],"content":[120],"66.5%":[122],"encodes":[124],"164":[125],"coding":[126],"sequences":[127],"(CDSs).":[128],"This":[129],"was":[131,198],"unique":[132],"terms":[134],"homology":[137,148],"to":[138,149,257],"other":[139],"mycobacterial":[140],"plasmids.":[141],"Interestingly,":[142],"it":[143],"contains":[144,169,248],"CDSs":[145],"mycobactin":[150],"biosynthesis":[151],"proteins":[152],"VII":[155],"secretion":[156],"system-related":[157],"proteins,":[158],"which":[159],"are":[160,238],"involved":[161],"pathogenicity":[164,254],"mycobacteria.":[166],"It":[167],"also":[168,278],"putative":[170],"conserved":[171],"domains":[172],"multidrug":[175],"efflux":[176],"transporter.":[177],"Screening":[178],"isolates":[180,202,222,234],"humans":[182],"for":[185],"genes":[186,197,216,237,249],"located":[187],"on":[188],"revealed":[190],"that":[191,233,266],"detection":[193],"rate":[194],"these":[196],"higher":[199],"clinical":[201],"patients":[207],"than":[208],"those":[210],"HIV-positive":[212],"patients,":[213],"whereas":[214],"were":[217],"almost":[218],"entirely":[219],"absent":[220],"pigs.":[224],"Moreover,":[225],"variable":[226],"number":[227],"tandem":[228],"repeats":[229],"typing":[230],"analysis":[231],"showed":[232],"carrying":[235],"grouped":[239],"specific":[242],"cluster.":[243],"Collectively,":[244],"associated":[250],"avium's":[253],"resistance":[256],"antimicrobial":[258],"agents.":[259],"results":[261],"study":[264],"suggest":[265],"influence":[268],"not":[269],"only":[270],"pathological":[272],"manifestations":[273],"disease,":[276],"but":[277],"infection.":[284]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
