{"id":"https://openalex.org/W2009931384","doi":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","title":"Effect of Ammonia Production by Colletotrichum gloeosporioides on pelB Activation, Pectate Lyase Secretion, and Fruit Pathogenicity","display_name":"Effect of Ammonia Production by Colletotrichum gloeosporioides on pelB Activation, Pectate Lyase Secretion, and Fruit Pathogenicity","publication_year":2006,"publication_date":"2006-02-01","ids":{"openalex":"https://openalex.org/W2009931384","doi":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","mag":"2009931384","pmid":"https://pubmed.ncbi.nlm.nih.gov/16461646","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/1392887"},"language":"en","primary_location":{"id":"doi:10.1128/aem.72.2.1034-1039.2006","doi":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://europepmc.org/pmc/articles/PMC1392887","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041064943","display_name":"H. Kramer-Haimovich","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"H. Kramer-Haimovich","raw_affiliation_strings":["Department of Postharvest Science of Fresh Produce"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Postharvest Science of Fresh Produce","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032081364","display_name":"E. Servi","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"E. Servi","raw_affiliation_strings":["Department of Postharvest Science of Fresh Produce"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Postharvest Science of Fresh Produce","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073564350","display_name":"Talma Katan","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I376102","display_name":"Agricultural Research Organization","ror":"https://ror.org/05hbrxp80","country_code":"IL","type":"government","lineage":["https://openalex.org/I376102"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"T. Katan","raw_affiliation_strings":["Department of Plant Pathology, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel","institution_ids":["https://openalex.org/I376102"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102847710","display_name":"Jeffrey A. Rollins","orcid":"https://orcid.org/0000-0002-9897-6292","observed_orcids":["https://orcid.org/0000-0002-9897-6292"]},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Rollins","raw_affiliation_strings":["Department of Plant Pathology, University of Florida, Gainesville, Florida 32611"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology, University of Florida, Gainesville, Florida 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066742931","display_name":"Yaacov Okon","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I197251160","display_name":"Hebrew University of Jerusalem","ror":"https://ror.org/03qxff017","country_code":"IL","type":"education","lineage":["https://openalex.org/I197251160"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Y. Okon","raw_affiliation_strings":["Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences, Rehovot 76100, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences, Rehovot 76100, Israel","institution_ids":["https://openalex.org/I197251160"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038441614","display_name":"Dov Prusky","orcid":"https://orcid.org/0000-0002-3350-4358","observed_orcids":["https://orcid.org/0000-0002-3350-4358"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"D. Prusky","raw_affiliation_strings":["Department of Postharvest Science of Fresh Produce"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Postharvest Science of Fresh Produce","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":5.1146,"has_fulltext":false,"cited_by_count":69,"citation_normalized_percentile":{"value":0.94506259,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"72","issue":"2","first_page":"1034","last_page":"1039"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.8988999724388123,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.8988999724388123,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10497","display_name":"Fungal and yeast genetics research","score":0.039000000804662704,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10473","display_name":"Postharvest Quality and Shelf Life Management","score":0.010400000028312206,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/colletotrichum-gloeosporioides","display_name":"Colletotrichum gloeosporioides","score":0.9980000257492065},{"id":"https://openalex.org/keywords/ammonia-accumulation","display_name":"ammonia accumulation","score":0.843999981880188},{"id":"https://openalex.org/keywords/area","display_name":"area","score":0.48399999737739563},{"id":"https://openalex.org/keywords/pac1","display_name":"PAC1","score":0.7210000157356262},{"id":"https://openalex.org/keywords/nitrogen-starvation","display_name":"nitrogen starvation","score":0.7680000066757202},{"id":"https://openalex.org/keywords/fungal-virulence","display_name":"fungal virulence","score":0.6759999990463257},{"id":"https://openalex.org/keywords/fungal-pathogenicity","display_name":"fungal pathogenicity","score":0.5379999876022339}],"concepts":[{"id":"https://openalex.org/C2776681119","wikidata":"https://www.wikidata.org/wiki/Q24776974","display_name":"Pectate lyase","level":4,"score":0.9867478609085083},{"id":"https://openalex.org/C49039625","wikidata":"https://www.wikidata.org/wiki/Q84230","display_name":"Secretion","level":2,"score":0.6285067200660706},{"id":"https://openalex.org/C2777269803","wikidata":"https://www.wikidata.org/wiki/Q407727","display_name":"Lyase","level":3,"score":0.5370970964431763},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.4979226589202881},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4915691316127777},{"id":"https://openalex.org/C2776382133","wikidata":"https://www.wikidata.org/wiki/Q4087","display_name":"Ammonia","level":2,"score":0.47471606731414795},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.4634425938129425},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4045217037200928},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3428729474544525},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.23260995745658875},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07565334439277649},{"id":"https://openalex.org/C172854840","wikidata":"https://www.wikidata.org/wiki/Q419568","display_name":"Pectinase","level":3,"score":0.07003876566886902}],"mesh":[{"descriptor_ui":"D000641","descriptor_name":"Ammonia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004271","descriptor_name":"DNA, Fungal","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004789","descriptor_name":"Enzyme Activation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005638","descriptor_name":"Fruit","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D005800","descriptor_name":"Genes, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009584","descriptor_name":"Nitrogen","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011133","descriptor_name":"Polysaccharide-Lyases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011133","descriptor_name":"Polysaccharide-Lyases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014774","descriptor_name":"Virulence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020231","descriptor_name":"Colletotrichum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020231","descriptor_name":"Colletotrichum","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D020231","descriptor_name":"Colletotrichum","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1128/aem.72.2.1034-1039.2006","doi":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","is_oa":false,"landing_page_url":"https://doi.org/10.1128/aem.72.2.1034-1039.2006","pdf_url":null,"source":{"id":"https://openalex.org/S158228368","display_name":"Applied and Environmental Microbiology","issn_l":"0099-2240","issn":["0099-2240","1070-6291","1098-5336"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-2","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and Environmental Microbiology","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:278453","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1392887","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},{"id":"pmid:16461646","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16461646","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied and environmental microbiology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1392887","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC1392887/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Appl Environ Microbiol","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:europepmc.org:278453","doi":null,"is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1392887","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.6875}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W102902030","https://openalex.org/W1493713941","https://openalex.org/W1514354796","https://openalex.org/W1520132037","https://openalex.org/W1995720533","https://openalex.org/W2023900692","https://openalex.org/W2045157314","https://openalex.org/W2045658031","https://openalex.org/W2070056713","https://openalex.org/W2079750286","https://openalex.org/W2084364838","https://openalex.org/W2096095036","https://openalex.org/W2098805702","https://openalex.org/W2099956436","https://openalex.org/W2101516193","https://openalex.org/W2110836438","https://openalex.org/W2128635872","https://openalex.org/W2130381741","https://openalex.org/W2132050330","https://openalex.org/W2135731693","https://openalex.org/W2140864400","https://openalex.org/W2154739251","https://openalex.org/W2166329258","https://openalex.org/W2167867974","https://openalex.org/W2329152654","https://openalex.org/W2468624275"],"related_works":["https://openalex.org/W2101516193","https://openalex.org/W2078964173","https://openalex.org/W2135731693","https://openalex.org/W2001647202","https://openalex.org/W2132050330","https://openalex.org/W2044415828","https://openalex.org/W2142895461","https://openalex.org/W4206677604","https://openalex.org/W2327467920","https://openalex.org/W2743038622"],"abstract_inverted_index":{"The":[0,116],"accumulation":[1,118,228],"of":[2,17,25,50,79,109,119,139,152,185,194,209,232,247,273],"ammonia":[3,18,54,110,120,227,233],"and":[4,58,91,125,212,229,245],"associated":[5],"tissue":[6],"alkalinization":[7,224,254],"predispose":[8],"avocado":[9,204],"fruit":[10,278],"to":[11,35,136,269],"attack":[12],"by":[13,19,29,215],"Colletotrichum":[14],"gloeosporioides.":[15,217,249],"Secretion":[16],"C.":[20,99,142,153,216,248,256],"gloeosporioides":[21,100,143,257],"in":[22,47,106,182,276],"the":[23,31,38,48,83,107,130,141,168,183,207,230,265,270,277],"presence":[24,108,184],"KNO3":[26,158],"was":[27,40,69,87,101,191],"induced":[28,121],"decreasing":[30],"pH":[32,43,104,132,180,200,223],"from":[33,112,134,226,264],"7.0":[34],"4.0.":[36],"When":[37],"fungus":[39],"grown":[41,102,178],"at":[42,103,179,199],"4.0":[44,135],"or":[45,170],"6.0":[46,105,181],"absence":[49],"a":[51,160,235],"nitrogen":[52,73,85,114,161,236],"source,":[53,162],"did":[55,163],"not":[56,164],"accumulate,":[57],"neither":[59],"pelB":[60,89,123,240],"(encoding":[61],"pectate":[62,66,92,126,172,188,242],"lyase)":[63],"transcription":[64,90],"nor":[65],"lyase":[67,93,127,189,243],"secretion":[68,94,190],"detected.":[70,88,149],"Under":[71],"these":[72],"starvation":[74],"conditions,":[75],"only":[76],"transcriptional":[77],"activation":[78,208],"areA,":[80],"which":[81,155],"encodes":[82],"global":[84],"regulator,":[86],"were":[95,177],"both":[96],"detected":[97],"when":[98],"accumulated":[111],"different":[113],"sources.":[115],"early":[117,122],"expression":[124],"secretion.":[128],"As":[129],"external":[131],"increased":[133],"6.0,":[137],"transcripts":[138],"pac1,":[140],"pacC":[144],"homolog,":[145],"also":[146],"could":[147],"be":[148],"Nit":[150,175],"mutants":[151,176],"gloeosporioides,":[154],"cannot":[156],"utilize":[157],"as":[159,234],"secrete":[165,171],"ammonia,":[166],"alkalinize":[167],"medium,":[169],"lyase.":[173],"If":[174],"glutamate,":[186],"then":[187],"induced.":[192],"Infiltration":[193],"0.1":[195],"M":[196],"ammonium":[197],"hydroxide":[198],"10":[201],"into":[202],"ripening":[203],"fruits":[205],"enhanced":[206],"quiescent":[210,266],"infection":[211,258],"symptom":[213],"development":[214],"These":[218,250],"results":[219],"suggest":[220,252],"that":[221,253],"ambient":[222],"resulting":[225],"availability":[231],"source":[237],"independently":[238],"regulate":[239],"expression,":[241],"secretion,":[244],"virulence":[246],"data":[251],"during":[255],"is":[259],"important":[260],"for":[261],"its":[262],"transformation":[263],"biotrophic":[267],"stage":[268,272],"necrotrophic":[271],"fungal":[274],"colonization":[275],"host.":[279]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":5}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}
