{"id":"https://openalex.org/W2006068827","doi":"https://doi.org/10.1002/cbic.200800099","title":"The Corrin Moiety of Coenzyme B12 is the Determinant for Switching the btuB Riboswitch of E. coli","display_name":"The Corrin Moiety of Coenzyme B12 is the Determinant for Switching the btuB Riboswitch of E. coli","publication_year":2008,"publication_date":"2008-05-28","ids":{"openalex":"https://openalex.org/W2006068827","doi":"https://doi.org/10.1002/cbic.200800099","mag":"2006068827","pmid":"https://pubmed.ncbi.nlm.nih.gov/18506875"},"language":"en","primary_location":{"id":"doi:10.1002/cbic.200800099","doi":"https://doi.org/10.1002/cbic.200800099","is_oa":false,"landing_page_url":"https://doi.org/10.1002/cbic.200800099","pdf_url":null,"source":{"id":"https://openalex.org/S154285657","display_name":"ChemBioChem","issn_l":"1439-4227","issn":["1439-4227","1439-7633"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ChemBioChem","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5167/uzh-5868","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088430573","display_name":"Sofia Gallo","orcid":"https://orcid.org/0000-0002-6712-5014","observed_orcids":["https://orcid.org/0000-0002-6712-5014"]},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Sofia Gallo","raw_affiliation_strings":["Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland","Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland, Fax: (+41)\u200944-635-68-02"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I202697423"]},{"raw_affiliation_string":"Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland, Fax: (+41)\u200944-635-68-02","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035216350","display_name":"Michael Oberhuber","orcid":"https://orcid.org/0000-0002-9989-7297","observed_orcids":["https://orcid.org/0000-0002-9989-7297"]},"institutions":[{"id":"https://openalex.org/I190249584","display_name":"Universit\u00e4t Innsbruck","ror":"https://ror.org/054pv6659","country_code":"AT","type":"education","lineage":["https://openalex.org/I190249584"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Michael Oberhuber","raw_affiliation_strings":["Institute of Organic Chemistry and Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck, Austria,","Institute of Organic Chemistry & Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck (Austria), Fax: (+43)\u2009512\u2010507\u20102892"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Organic Chemistry and Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck, Austria,","institution_ids":["https://openalex.org/I190249584"]},{"raw_affiliation_string":"Institute of Organic Chemistry & Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck (Austria), Fax: (+43)\u2009512\u2010507\u20102892","institution_ids":["https://openalex.org/I190249584"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021200399","display_name":"Roland K. O. Sigel","orcid":"https://orcid.org/0000-0002-1307-7993","observed_orcids":["https://orcid.org/0000-0002-1307-7993"]},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Roland K. O. Sigel","raw_affiliation_strings":["Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland, Fax: (+41)\u200944-635-68-02"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Inorganic Chemistry, University of Z\u00fcrich, Winterthurerstrasse 190, 8057 Z\u00fcrich, Switzerland, Fax: (+41)\u200944-635-68-02","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073612482","display_name":"Bernhard Kr\u00e4utler","orcid":"https://orcid.org/0000-0002-2222-0587","observed_orcids":["https://orcid.org/0000-0002-2222-0587"]},"institutions":[{"id":"https://openalex.org/I190249584","display_name":"Universit\u00e4t Innsbruck","ror":"https://ror.org/054pv6659","country_code":"AT","type":"education","lineage":["https://openalex.org/I190249584"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Bernhard Kr\u00e4utler","raw_affiliation_strings":["Institute of Organic Chemistry & Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck (Austria), Fax: (+43)\u2009512\u2010507\u20102892"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Organic Chemistry & Centre of Molecular Biosciences, University of Innsbruck, 6020 Innsbruck (Austria), Fax: (+43)\u2009512\u2010507\u20102892","institution_ids":["https://openalex.org/I190249584"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4430,"currency":"USD","value_usd":4430},"apc_paid":null,"fwci":1.624,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.81580127,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":87,"max":99},"biblio":{"volume":"9","issue":"9","first_page":"1408","last_page":"1414"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coenzyme-b12","display_name":"coenzyme B12","score":0.9480000138282776},{"id":"https://openalex.org/keywords/corrin-ring","display_name":"corrin ring","score":0.8899999856948853},{"id":"https://openalex.org/keywords/riboswitch-structure","display_name":"riboswitch structure","score":0.5690000057220459},{"id":"https://openalex.org/keywords/rna-ligand-binding","display_name":"RNA-ligand binding","score":0.6790000200271606},{"id":"https://openalex.org/keywords/vitamin-b12","display_name":"vitamin B12","score":0.902999997138977},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.8299999833106995},{"id":"https://openalex.org/keywords/gene-expression-regulation","display_name":"gene expression regulation","score":0.7839999794960022},{"id":"https://openalex.org/keywords/5-untranslated-region","display_name":"5' untranslated region","score":0.8270000219345093}],"concepts":[{"id":"https://openalex.org/C148625055","wikidata":"https://www.wikidata.org/wiki/Q418840","display_name":"Riboswitch","level":5,"score":0.9700613021850586},{"id":"https://openalex.org/C2780187287","wikidata":"https://www.wikidata.org/wiki/Q120384","display_name":"Corrin","level":3,"score":0.9099701046943665},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5855124592781067},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.48242077231407166},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.4608656167984009},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.43637174367904663},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2820430397987366},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.23262256383895874},{"id":"https://openalex.org/C2779750884","wikidata":"https://www.wikidata.org/wiki/Q187706","display_name":"Vitamin B12","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003035","descriptor_name":"Cobalt","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003067","descriptor_name":"Coenzymes","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D003067","descriptor_name":"Coenzymes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012329","descriptor_name":"RNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D026901","descriptor_name":"Membrane Transport Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D038621","descriptor_name":"Regulatory Sequences, Ribonucleic Acid","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D045728","descriptor_name":"Corrinoids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1002/cbic.200800099","doi":"https://doi.org/10.1002/cbic.200800099","is_oa":false,"landing_page_url":"https://doi.org/10.1002/cbic.200800099","pdf_url":null,"source":{"id":"https://openalex.org/S154285657","display_name":"ChemBioChem","issn_l":"1439-4227","issn":["1439-4227","1439-7633"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ChemBioChem","raw_type":"journal-article"},{"id":"pmid:18506875","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18506875","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Chembiochem : a European journal of chemical biology","raw_type":"Journal Article"},{"id":"pmh:oai:www.zora.uzh.ch:5868","doi":null,"is_oa":false,"landing_page_url":"https://www.zora.uzh.ch/id/eprint/5868/9/Gallo_Corrin_moiety_2008V.pdf","pdf_url":"https://www.zora.uzh.ch/id/eprint/5868/9/Gallo_Corrin_moiety_2008V.pdf","source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Gallo, S; Oberhuber, M; Sigel, Roland K O; Kr\u00e4utler, B (2008). The corrin moiety of coenzyme B12 is the determinant for switching the btuB riboswitch of E. coli. ChemBioChem, 9(9):1408-1414.","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.zora.uzh.ch:20.500.14742/34930","doi":null,"is_oa":false,"landing_page_url":"https://www.zora.uzh.ch/handle/20.500.14742/34930","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Gallo, S., Oberhuber, M., Sigel, R. K. O., & Kr\u00e4utler, B. (2008). The corrin moiety of coenzyme B12 is the determinant for switching the btuB riboswitch of E. coli. Chembiochem, 9, 1408\u20131414. https://doi.org/10.1002/cbic.200800099","raw_type":"Journal Article"},{"id":"doi:10.5167/uzh-5868","doi":"https://doi.org/10.5167/uzh-5868","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-5868","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.5167/uzh-5868","doi":"https://doi.org/10.5167/uzh-5868","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-5868","pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"JournalArticle"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W17974887","https://openalex.org/W79813148","https://openalex.org/W1538296334","https://openalex.org/W1972708527","https://openalex.org/W1973589373","https://openalex.org/W1988099644","https://openalex.org/W1989199714","https://openalex.org/W1998709767","https://openalex.org/W1999404678","https://openalex.org/W2011551228","https://openalex.org/W2012879790","https://openalex.org/W2014259880","https://openalex.org/W2021920164","https://openalex.org/W2023115836","https://openalex.org/W2027131183","https://openalex.org/W2048558976","https://openalex.org/W2052397524","https://openalex.org/W2061777266","https://openalex.org/W2065225159","https://openalex.org/W2087806475","https://openalex.org/W2104579086","https://openalex.org/W2116786413","https://openalex.org/W2121626566","https://openalex.org/W2125381708","https://openalex.org/W2130978693","https://openalex.org/W2131841865","https://openalex.org/W2144381972","https://openalex.org/W2148911704","https://openalex.org/W2153319663","https://openalex.org/W2153461732","https://openalex.org/W2154207726","https://openalex.org/W2165410540","https://openalex.org/W2165462009","https://openalex.org/W2495372550","https://openalex.org/W4251503726"],"related_works":["https://openalex.org/W4399930608","https://openalex.org/W3046901755","https://openalex.org/W2042146766","https://openalex.org/W2754416289","https://openalex.org/W1998709767","https://openalex.org/W1964660564","https://openalex.org/W2595270309","https://openalex.org/W2197875730","https://openalex.org/W2069173306","https://openalex.org/W2200426226"],"abstract_inverted_index":{"Riboswitches":[0],"are":[1],"regulatory":[2],"elements":[3],"in":[4,43,102],"the":[5,44,54,60,63,66,70,95,99,104,109,114,118,122],"5'-untranslated":[6],"region":[7],"(5'-UTR)":[8],"of":[9,28,53,62,65,69,117],"bacterial":[10],"mRNAs":[11],"that":[12,94],"bind":[13],"certain":[14],"metabolites":[15],"with":[16,33],"high":[17],"specificity":[18],"and":[19,36,47,87],"affinity.":[20],"The":[21],"202":[22],"nucleotide":[23],"(nt)-long":[24],"btuB":[25,56,71,123],"riboswitch":[26,72,106],"RNA":[27,45],"E.":[29],"coli":[30],"interacts":[31],"specifically":[32],"coenzyme":[34,80],"B12":[35,78,119],"its":[37],"derivatives":[38],"thereby":[39],"leading":[40],"to":[41,49,75,121],"changes":[42],"structure":[46,68],"hence":[48],"an":[50],"altered":[51],"expression":[52],"downstream":[55],"gene.":[57],"We":[58],"report":[59],"investigations":[61],"rearrangement":[64],"three-dimensional":[67,105],"upon":[73],"binding":[74,115],"four":[76],"different":[77],"derivatives:":[79],"B12,":[81,83],"vitamin":[82],"adenosyl":[84],"factor":[85],"A":[86],"adenosyl-cobinamide.":[88],"In-line":[89],"probing":[90],"experiments":[91],"have":[92],"shown":[93],"corrin":[96],"ring":[97],"plays":[98],"crucial":[100],"role":[101],"switching":[103],"structure.":[107],"Instead,":[108],"apical":[110],"ligands":[111],"influence":[112],"only":[113],"affinity":[116],"derivative":[120],"riboswitch.":[124]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":3}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
