{"id":"https://openalex.org/W2002284969","doi":"https://doi.org/10.1104/pp.81.4.1033","title":"Phytochrome Control of Specific mRNA levels in Developing Pea Buds","display_name":"Phytochrome Control of Specific mRNA levels in Developing Pea Buds","publication_year":1986,"publication_date":"1986-08-01","ids":{"openalex":"https://openalex.org/W2002284969","doi":"https://doi.org/10.1104/pp.81.4.1033","mag":"2002284969","pmid":"https://pubmed.ncbi.nlm.nih.gov/16664939","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/1075481"},"language":"en","primary_location":{"id":"doi:10.1104/pp.81.4.1033","doi":"https://doi.org/10.1104/pp.81.4.1033","is_oa":true,"landing_page_url":"https://doi.org/10.1104/pp.81.4.1033","pdf_url":"https://academic.oup.com/plphys/article-pdf/81/4/1033/35623036/plphys_v81_4_1033.pdf","source":{"id":"https://openalex.org/S42294715","display_name":"PLANT PHYSIOLOGY","issn_l":"0032-0889","issn":["0032-0889","1532-2548"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/plphys/article-pdf/81/4/1033/35623036/plphys_v81_4_1033.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111583477","display_name":"Lon S. Kaufman","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Carnegie Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lon S. Kaufman","raw_affiliation_strings":["Carnegie Institution of Washington, Department of Plant Biology, Stanford, California 94305"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington, Department of Plant Biology, Stanford, California 94305","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014237915","display_name":"Linda L. Roberts","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Carnegie Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Linda L. Roberts","raw_affiliation_strings":["Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110138292","display_name":"Winslow R. Briggs","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Carnegie Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Winslow R. Briggs","raw_affiliation_strings":["Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073096791","display_name":"William F. Thompson","orcid":"https://orcid.org/0000-0001-5034-8337","observed_orcids":["https://orcid.org/0000-0001-5034-8337"]},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I196817621"]},{"id":"https://openalex.org/I4210095419","display_name":"Carnegie Department of Plant Biology","ror":"https://ror.org/00tdyb139","country_code":"US","type":"facility","lineage":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William F. Thompson","raw_affiliation_strings":["Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Carnegie Institution of Washington, Department ofPlant Biology, Stanford, California 94305","institution_ids":["https://openalex.org/I196817621","https://openalex.org/I4210095419"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3851,"currency":"USD","value_usd":3851},"apc_paid":null,"fwci":19.6124,"has_fulltext":true,"cited_by_count":78,"citation_normalized_percentile":{"value":0.99560294,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":93},"biblio":{"volume":"81","issue":"4","first_page":"1033","last_page":"1038"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11268","display_name":"Light effects on plants","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phytochrome","display_name":"phytochrome","score":0.9909999966621399},{"id":"https://openalex.org/keywords/mrna-accumulation","display_name":"mRNA accumulation","score":0.5759999752044678},{"id":"https://openalex.org/keywords/photoreversibility","display_name":"photoreversibility","score":0.7149999737739563},{"id":"https://openalex.org/keywords/chlorophyll-a-b-binding-protein","display_name":"chlorophyll a/b binding protein","score":0.9089999794960022},{"id":"https://openalex.org/keywords/rubisco","display_name":"Rubisco","score":0.9860000014305115},{"id":"https://openalex.org/keywords/rna-turnover","display_name":"RNA turnover","score":0.6140000224113464},{"id":"https://openalex.org/keywords/seedling-development","display_name":"seedling development","score":0.42899999022483826}],"concepts":[{"id":"https://openalex.org/C90180588","wikidata":"https://www.wikidata.org/wiki/Q24779306","display_name":"Phytochrome","level":3,"score":0.9169341325759888},{"id":"https://openalex.org/C2779027399","wikidata":"https://www.wikidata.org/wiki/Q204170","display_name":"Darkness","level":2,"score":0.6552538871765137},{"id":"https://openalex.org/C50212798","wikidata":"https://www.wikidata.org/wiki/Q422516","display_name":"RuBisCO","level":3,"score":0.600317656993866},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5753718018531799},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.4937222898006439},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.46691134572029114},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.45176154375076294},{"id":"https://openalex.org/C2909544318","wikidata":"https://www.wikidata.org/wiki/Q24779306","display_name":"Phytochrome A","level":5,"score":0.4325338304042816},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.43026822805404663},{"id":"https://openalex.org/C183688256","wikidata":"https://www.wikidata.org/wiki/Q11982","display_name":"Photosynthesis","level":2,"score":0.4067777395248413},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.3571820855140686},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.30689918994903564},{"id":"https://openalex.org/C2986477067","wikidata":"https://www.wikidata.org/wiki/Q1210055","display_name":"Red light","level":2,"score":0.2696581184864044},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2605011463165283},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.17698615789413452},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.13928738236427307}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1104/pp.81.4.1033","doi":"https://doi.org/10.1104/pp.81.4.1033","is_oa":true,"landing_page_url":"https://doi.org/10.1104/pp.81.4.1033","pdf_url":"https://academic.oup.com/plphys/article-pdf/81/4/1033/35623036/plphys_v81_4_1033.pdf","source":{"id":"https://openalex.org/S42294715","display_name":"PLANT PHYSIOLOGY","issn_l":"0032-0889","issn":["0032-0889","1532-2548"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiology","raw_type":"journal-article"},{"id":"pmid:16664939","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16664939","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant physiology","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1075481","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC1075481/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1104/pp.81.4.1033","doi":"https://doi.org/10.1104/pp.81.4.1033","is_oa":true,"landing_page_url":"https://doi.org/10.1104/pp.81.4.1033","pdf_url":"https://academic.oup.com/plphys/article-pdf/81/4/1033/35623036/plphys_v81_4_1033.pdf","source":{"id":"https://openalex.org/S42294715","display_name":"PLANT PHYSIOLOGY","issn_l":"0032-0889","issn":["0032-0889","1532-2548"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-a","jufo-3","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Plant Physiology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2002284969.pdf","grobid_xml":"https://content.openalex.org/works/W2002284969.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1208155","https://openalex.org/W1512652544","https://openalex.org/W1520460458","https://openalex.org/W1966478113","https://openalex.org/W1970816217","https://openalex.org/W1987803472","https://openalex.org/W1996205483","https://openalex.org/W2003280534","https://openalex.org/W2010535430","https://openalex.org/W2012340821","https://openalex.org/W2018641179","https://openalex.org/W2023343628","https://openalex.org/W2030523421","https://openalex.org/W2042934552","https://openalex.org/W2043343933","https://openalex.org/W2051318740","https://openalex.org/W2052895936","https://openalex.org/W2062596385","https://openalex.org/W2068141175","https://openalex.org/W2068652746","https://openalex.org/W2071029581","https://openalex.org/W2080682507","https://openalex.org/W2081442903","https://openalex.org/W2144830882","https://openalex.org/W2318946104","https://openalex.org/W2407120286","https://openalex.org/W3021033929"],"related_works":["https://openalex.org/W2028775593","https://openalex.org/W87937469","https://openalex.org/W2080233820","https://openalex.org/W2043343933","https://openalex.org/W1965405554","https://openalex.org/W2739995743","https://openalex.org/W1988910691","https://openalex.org/W1995819541","https://openalex.org/W2028895980","https://openalex.org/W2082649573"],"abstract_inverted_index":{"We":[0],"have":[1,193,279],"examined":[2,195],"the":[3,58,77,100,129,169,178,196,215,225,236,251,259,269,299,312,323],"time":[4,43,240,300],"course":[5,301],"for":[6,57,99,235,273,288],"accumulation":[7,121],"of":[8,10,155,159,181,201,262,298,311,325],"each":[9,200],"12":[11,42,124,203],"different":[12,231,237,274],"nuclear":[13],"gene":[14],"transcripts":[15,53,81,106],"in":[16,38,74,141,143,162,174,176,268],"pea":[17],"buds":[18],"after":[19,91,128,224,265],"irradiating":[20],"dark":[21,270],"grown":[22],"seedlings":[23],"with":[24,198,217],"a":[25,68,89,108,138,153,296],"single":[26],"pulse":[27],"low":[28],"fluence":[29,180],"red":[30,130,146,226,244],"light":[31,78,131,182,219,227],"(10(3)":[32],"micromoles":[33],"per":[34],"square":[35],"meter":[36],"delivered":[37],"100":[39],"seconds).":[40],"The":[41,239],"courses":[44],"can":[45],"be":[46,249],"grouped":[47],"into":[48],"four":[49],"general":[50],"classes.":[51],"Six":[52],"(including":[54],"RNAs":[55],"coding":[56],"chlorophyll":[59],"a/b":[60],"binding":[61],"protein":[62],"and":[63,94,116,190,258,302],"ribulose-1,5-bisphosphate":[64],"carboxylase)":[65],"accumulate":[66],"at":[67,84,96,221,241,253,289],"linear":[69],"rate":[70,252,324],"during":[71],"24":[72],"hours":[73,93,127,267],"darkness":[75],"following":[76],"pulse.":[79,132,228],"Two":[80],"increase":[82,140],"rapidly":[83],"first":[85,246],"but":[86,148],"then":[87],"reach":[88,119],"plateau":[90],"3":[92],"remain":[95],"that":[97,281,307],"level":[98],"next":[101],"21":[102],"hours.":[103,292],"Another":[104],"two":[105],"exhibit":[107],"prolonged":[109],"lag":[110],"period":[111],"before":[112],"beginning":[113],"to":[114,125,136,145,213,248],"accumulate,":[115],"do":[117],"not":[118,318,322],"significant":[120],"rates":[122],"until":[123],"16":[126],"One":[133],"transcript":[134],"appears":[135],"undergo":[137],"transient":[139],"abundance":[142,158],"response":[144],"light,":[147],"this":[149,160],"is":[150,183,256,317,327],"superimposed":[151],"on":[152],"background":[154],"slowly":[156],"increasing":[157],"RNA":[161,313],"control":[163,210],"plants.":[164],"This":[165],"response,":[166],"unlike":[167],"all":[168,271],"others,":[170],"exhibits":[171],"reciprocity":[172],"failure":[173],"experiments":[175],"which":[177,199,242,254],"same":[179],"given":[184,220],"over":[185],"periods":[186],"ranging":[187],"between":[188],"50":[189],"4000":[191],"seconds.We":[192],"also":[194],"kinetics":[197],"these":[202],"responses":[204,283],"escapes":[205],"from":[206],"phytochrome-far-red":[207],"absorbing":[208],"form":[209],"by":[211,329],"attempting":[212],"reverse":[214],"induction":[216],"far-red":[218],"various":[222],"times":[223],"Again,":[229],"several":[230],"patterns":[232],"are":[233],"apparent":[234],"transcripts.":[238,275],"far":[243],"reversibility":[245,263],"begins":[247],"lost,":[250,257],"it":[255],"final":[260],"extent":[261],"remaining":[264],"7":[266,291],"differ":[272],"In":[276,293],"addition,":[277],"we":[278],"observed":[280],"some":[282,294],"retain":[284],"virtually":[285],"complete":[286],"photoreversibility":[287],"least":[290],"cases,":[295],"comparison":[297],"escape":[303],"kinetic":[304],"data":[305],"indicates":[306],"relatively":[308],"rapid":[309],"turnover":[310,326],"must":[314],"occur.":[315],"It":[316],"clear":[319],"whether":[320],"or":[321],"influenced":[328],"phytochrome.":[330]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}