{"id":"https://openalex.org/W2000305183","doi":"https://doi.org/10.1007/s00251-011-0579-8","title":"NetMHCcons: a consensus method for the major histocompatibility complex class I predictions","display_name":"NetMHCcons: a consensus method for the major histocompatibility complex class I predictions","publication_year":2011,"publication_date":"2011-10-18","ids":{"openalex":"https://openalex.org/W2000305183","doi":"https://doi.org/10.1007/s00251-011-0579-8","mag":"2000305183","pmid":"https://pubmed.ncbi.nlm.nih.gov/22009319"},"language":"en","primary_location":{"id":"doi:10.1007/s00251-011-0579-8","doi":"https://doi.org/10.1007/s00251-011-0579-8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00251-011-0579-8","pdf_url":null,"source":{"id":"https://openalex.org/S62103174","display_name":"Immunogenetics","issn_l":"0093-7711","issn":["0093-7711","1432-1211"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Immunogenetics","raw_type":"journal-article"},"parent_works":[],"lineage":["https://openalex.org/W2000305183"],"child_works_count":0,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032343610","display_name":"Edita Karosiene","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"Edita Karosiene","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark. edita@cbs.dtu.dk","Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby 2800, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark. edita@cbs.dtu.dk","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby 2800, Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109211420","display_name":"Claus Lundegaard","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Claus Lundegaard","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","Center for Biological Sequence Analysis Department of Systems Biology Technical University of Denmark Lyngby Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology Technical University of Denmark Lyngby Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071462078","display_name":"Ole Lund","orcid":"https://orcid.org/0000-0003-1108-0491","observed_orcids":["https://orcid.org/0000-0003-1108-0491"]},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Ole Lund","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","Center for Biological Sequence Analysis Department of Systems Biology Technical University of Denmark Lyngby Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"Center for Biological Sequence Analysis Department of Systems Biology Technical University of Denmark Lyngby Denmark","institution_ids":["https://openalex.org/I96673099"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076702280","display_name":"Morten Nielsen","orcid":"https://orcid.org/0000-0001-7885-4311","observed_orcids":["https://orcid.org/0000-0001-7885-4311"]},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Morten Nielsen","raw_affiliation_strings":["Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","#N##TAB##TAB##TAB##TAB# Technical University of Denmark#N##TAB##TAB##TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Building 208, Kemitorvet, Lyngby, 2800, Denmark","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"#N##TAB##TAB##TAB##TAB# Technical University of Denmark#N##TAB##TAB##TAB#","institution_ids":["https://openalex.org/I96673099"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5032343610"],"corresponding_institution_ids":["https://openalex.org/I96673099"],"apc_list":{"value":2890,"currency":"USD","value_usd":2890},"apc_paid":null,"fwci":3.0532,"has_fulltext":false,"cited_by_count":401,"citation_normalized_percentile":{"value":0.92738856,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"64","issue":"3","first_page":"177","last_page":"186"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.0,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/consensus-forecasts","display_name":"consensus forecasts","score":0.7089999914169312},{"id":"https://openalex.org/keywords/netmhcpan","display_name":"NetMHCpan","score":1.0},{"id":"https://openalex.org/keywords/pickpockets","display_name":"pickpockets","score":0.9959999918937683},{"id":"https://openalex.org/keywords/peptide-mhc-binding","display_name":"peptide-MHC binding","score":0.7390000224113464},{"id":"https://openalex.org/keywords/cell-mediated-immunity","display_name":"cell-mediated immunity","score":0.8299999833106995},{"id":"https://openalex.org/keywords/mhc-alleles","display_name":"MHC alleles","score":0.5669999718666077},{"id":"https://openalex.org/keywords/prediction-accuracy","display_name":"prediction accuracy","score":0.3959999978542328}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8217759132385254},{"id":"https://openalex.org/C207936829","wikidata":"https://www.wikidata.org/wiki/Q423163","display_name":"Major histocompatibility complex","level":3,"score":0.6929999589920044},{"id":"https://openalex.org/C47042493","wikidata":"https://www.wikidata.org/wiki/Q265799","display_name":"Human genetics","level":3,"score":0.6002155542373657},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.5695720911026001},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5454133749008179},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5434253215789795},{"id":"https://openalex.org/C1547928","wikidata":"https://www.wikidata.org/wiki/Q1660177","display_name":"Immunogenetics","level":3,"score":0.49910807609558105},{"id":"https://openalex.org/C202965653","wikidata":"https://www.wikidata.org/wiki/Q2664028","display_name":"Histocompatibility","level":4,"score":0.4815128743648529},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.38424402475357056},{"id":"https://openalex.org/C188280979","wikidata":"https://www.wikidata.org/wiki/Q911125","display_name":"Human leukocyte antigen","level":3,"score":0.3367825150489807},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.28364264965057373},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.15105223655700684},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11712655425071716},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.10678043961524963}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000483","descriptor_name":"Alleles","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032921","descriptor_name":"Consensus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1007/s00251-011-0579-8","doi":"https://doi.org/10.1007/s00251-011-0579-8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/s00251-011-0579-8","pdf_url":null,"source":{"id":"https://openalex.org/S62103174","display_name":"Immunogenetics","issn_l":"0093-7711","issn":["0093-7711","1432-1211"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-70","russia-white-list-2"],"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Immunogenetics","raw_type":"journal-article"},{"id":"pmid:22009319","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22009319","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Immunogenetics","raw_type":"Journal Article"},{"id":"pmh:oai:pure.atira.dk:publications/23af7599-5a1d-474c-b0c4-2f79823d77ae","doi":null,"is_oa":false,"landing_page_url":"https://orbit.dtu.dk/en/publications/23af7599-5a1d-474c-b0c4-2f79823d77ae","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Karosiene , E , Lundegaard , C , Lund , O &amp; Nielsen , M 2012 , ' NetMHCcons: a consensus method for the major histocompatibility complex class I predictions ' , Immunogenetics , vol. 64 , no. 3 , pp. 177-186 . https://doi.org/10.1007/s00251-011-0579-8","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G124998730","display_name":null,"funder_award_id":"HHSN272200900045C","funder_id":"https://openalex.org/F4320332505","funder_display_name":"U.S. Public Health Service"},{"id":"https://openalex.org/G3107870023","display_name":null,"funder_award_id":"HHSNN26600400006C","funder_id":"https://openalex.org/F4320332505","funder_display_name":"U.S. Public Health Service"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332505","display_name":"U.S. Public Health Service","ror":"https://ror.org/05xf94514"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1490155859","https://openalex.org/W1558421445","https://openalex.org/W1573515701","https://openalex.org/W1913929583","https://openalex.org/W1991461541","https://openalex.org/W2019711015","https://openalex.org/W2028339001","https://openalex.org/W2053843590","https://openalex.org/W2053931156","https://openalex.org/W2061096391","https://openalex.org/W2077480262","https://openalex.org/W2094706980","https://openalex.org/W2100350770","https://openalex.org/W2100549317","https://openalex.org/W2110574412","https://openalex.org/W2110694683","https://openalex.org/W2111066113","https://openalex.org/W2122779464","https://openalex.org/W2125732073","https://openalex.org/W2142269152","https://openalex.org/W2142739377","https://openalex.org/W2144185370","https://openalex.org/W2168688111"],"related_works":["https://openalex.org/W2121675051","https://openalex.org/W2168688111","https://openalex.org/W2111066113","https://openalex.org/W2062470335","https://openalex.org/W2721701181","https://openalex.org/W2094706980","https://openalex.org/W2053931156","https://openalex.org/W3024570138","https://openalex.org/W2621156750","https://openalex.org/W2326870000"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":18},{"year":2025,"cited_by_count":38},{"year":2024,"cited_by_count":44},{"year":2023,"cited_by_count":37},{"year":2022,"cited_by_count":28},{"year":2021,"cited_by_count":40},{"year":2020,"cited_by_count":37},{"year":2019,"cited_by_count":44},{"year":2018,"cited_by_count":29},{"year":2017,"cited_by_count":22},{"year":2016,"cited_by_count":22},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":13},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":7}],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2016-06-24T00:00:00"}
