{"id":"https://openalex.org/W1998715020","doi":"https://doi.org/10.1007/s10535-014-0400-2","title":"Reduced protein secretion and glycosylation induced by ammonium stress inhibits somatic embryo development in pumpkin","display_name":"Reduced protein secretion and glycosylation induced by ammonium stress inhibits somatic embryo development in pumpkin","publication_year":2014,"publication_date":"2014-02-20","ids":{"openalex":"https://openalex.org/W1998715020","doi":"https://doi.org/10.1007/s10535-014-0400-2","mag":"1998715020"},"language":"en","primary_location":{"id":"doi:10.1007/s10535-014-0400-2","doi":"https://doi.org/10.1007/s10535-014-0400-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10535-014-0400-2","pdf_url":"http://bp.ueb.cas.cz/doi/10.1007/s10535-014-0400-2.pdf","source":{"id":"https://openalex.org/S56909845","display_name":"Biologia Plantarum","issn_l":"0006-3134","issn":["0006-3134","1573-8264"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310314217","host_organization_name":"Institute of Experimental Botany of the Czech Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310314217","https://openalex.org/P4310314171"],"host_organization_lineage_names":["Institute of Experimental Botany of the Czech Academy of Sciences","Czech Academy of Sciences"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biologia plantarum","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"http://bp.ueb.cas.cz/doi/10.1007/s10535-014-0400-2.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055251945","display_name":"Alen Crnkovi\u0107","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]},{"id":"https://openalex.org/I4210123216","display_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"A. Crnkovi\u0107","raw_affiliation_strings":["Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","Institute Ru\u0111er Bo\u0161kovi\u0107"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","institution_ids":["https://openalex.org/I181343428"]},{"raw_affiliation_string":"Institute Ru\u0111er Bo\u0161kovi\u0107","institution_ids":["https://openalex.org/I4210123216"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006573168","display_name":"Rade Gari\u0107","orcid":"https://orcid.org/0000-0001-6477-5559","observed_orcids":["https://orcid.org/0000-0001-6477-5559"]},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]},{"id":"https://openalex.org/I4210123216","display_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"R. Gari\u0107","raw_affiliation_strings":["Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","Institute Ru\u0111er Bo\u0161kovi\u0107"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","institution_ids":["https://openalex.org/I181343428"]},{"raw_affiliation_string":"Institute Ru\u0111er Bo\u0161kovi\u0107","institution_ids":["https://openalex.org/I4210123216"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046349109","display_name":"Dunja Leljak-Levani\u0107","orcid":"https://orcid.org/0000-0002-7039-4864","observed_orcids":["https://orcid.org/0000-0002-7039-4864"]},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]},{"id":"https://openalex.org/I4210123216","display_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"D. Leljak-Levani\u0107","raw_affiliation_strings":["Institute Ru\u0111er Bo\u0161kovi\u0107 , Bijeni\u010dka cest 54 , 10000 Zagreb , Croatia","Univ. of Zagreb"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute Ru\u0111er Bo\u0161kovi\u0107 , Bijeni\u010dka cest 54 , 10000 Zagreb , Croatia","institution_ids":["https://openalex.org/I4210123216"]},{"raw_affiliation_string":"Univ. of Zagreb","institution_ids":["https://openalex.org/I181343428"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073493572","display_name":"Snje\u017eana Mihaljevi\u0107","orcid":"https://orcid.org/0000-0002-3969-4711","observed_orcids":["https://orcid.org/0000-0002-3969-4711"]},"institutions":[{"id":"https://openalex.org/I181343428","display_name":"University of Zagreb","ror":"https://ror.org/00mv6sv71","country_code":"HR","type":"education","lineage":["https://openalex.org/I181343428"]},{"id":"https://openalex.org/I4210123216","display_name":"Ru\u0111er Bo\u0161kovi\u0107 Institute","ror":"https://ror.org/02mw21745","country_code":"HR","type":"facility","lineage":["https://openalex.org/I4210123216"]}],"countries":["HR"],"is_corresponding":false,"raw_author_name":"S. Mihaljevi\u0107","raw_affiliation_strings":["Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","Institute Ru\u0111er Bo\u0161kovi\u0107"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Science , University of Zagreb , Horvatovac 102a , 10000 Zagreb , Croatia","institution_ids":["https://openalex.org/I181343428"]},{"raw_affiliation_string":"Institute Ru\u0111er Bo\u0161kovi\u0107","institution_ids":["https://openalex.org/I4210123216"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3140,"currency":"USD","value_usd":3140},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"58","issue":"2","first_page":"209","last_page":"217"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10240","display_name":"Plant tissue culture and regeneration","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10240","display_name":"Plant tissue culture and regeneration","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10869","display_name":"Polysaccharides and Plant Cell Walls","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/somatic-embryogenesis","display_name":"somatic embryogenesis","score":0.8550000190734863},{"id":"https://openalex.org/keywords/pumpkin","display_name":"pumpkin","score":0.906000018119812},{"id":"https://openalex.org/keywords/ammonium-stress","display_name":"ammonium stress","score":0.8309999704360962},{"id":"https://openalex.org/keywords/extracellular-proteins","display_name":"extracellular proteins","score":0.722000002861023},{"id":"https://openalex.org/keywords/glycoproteins","display_name":"glycoproteins","score":0.9340000152587891},{"id":"https://openalex.org/keywords/protein-secretion","display_name":"protein secretion","score":0.8939999938011169},{"id":"https://openalex.org/keywords/glycosylation","display_name":"glycosylation","score":0.9179999828338623},{"id":"https://openalex.org/keywords/2-4-d","display_name":"2,4-D","score":0.8859999775886536},{"id":"https://openalex.org/keywords/high-mannose-n-glycans","display_name":"high-mannose glycans","score":0.7699999809265137},{"id":"https://openalex.org/keywords/lectin-binding","display_name":"lectin binding","score":0.746999979019165},{"id":"https://openalex.org/keywords/endochitinase","display_name":"endochitinase","score":0.671999990940094},{"id":"https://openalex.org/keywords/cell-aggregation","display_name":"cell aggregation","score":0.5590000152587891}],"concepts":[{"id":"https://openalex.org/C108625454","wikidata":"https://www.wikidata.org/wiki/Q187126","display_name":"Glycoprotein","level":2,"score":0.7850320339202881},{"id":"https://openalex.org/C28406088","wikidata":"https://www.wikidata.org/wiki/Q5571762","display_name":"Extracellular","level":2,"score":0.7555596828460693},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.6747534275054932},{"id":"https://openalex.org/C2777313579","wikidata":"https://www.wikidata.org/wiki/Q898365","display_name":"Glycosylation","level":2,"score":0.6097336411476135},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6000421047210693},{"id":"https://openalex.org/C2775887612","wikidata":"https://www.wikidata.org/wiki/Q10809118","display_name":"Mannose","level":2,"score":0.5867122411727905},{"id":"https://openalex.org/C49039625","wikidata":"https://www.wikidata.org/wiki/Q84230","display_name":"Secretion","level":2,"score":0.5674574971199036},{"id":"https://openalex.org/C201468095","wikidata":"https://www.wikidata.org/wiki/Q7559239","display_name":"Somatic embryogenesis","level":4,"score":0.5277113318443298},{"id":"https://openalex.org/C206212055","wikidata":"https://www.wikidata.org/wiki/Q2553138","display_name":"Glycan","level":3,"score":0.5077635049819946},{"id":"https://openalex.org/C2780758401","wikidata":"https://www.wikidata.org/wiki/Q408693","display_name":"Lectin","level":2,"score":0.4893640875816345},{"id":"https://openalex.org/C207545495","wikidata":"https://www.wikidata.org/wiki/Q2573513","display_name":"Agglutinin","level":3,"score":0.42269033193588257},{"id":"https://openalex.org/C2779870022","wikidata":"https://www.wikidata.org/wiki/Q190901","display_name":"Ammonium","level":2,"score":0.4219127893447876},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.25264251232147217},{"id":"https://openalex.org/C87073359","wikidata":"https://www.wikidata.org/wiki/Q33196","display_name":"Embryogenesis","level":3,"score":0.24494579434394836},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/s10535-014-0400-2","doi":"https://doi.org/10.1007/s10535-014-0400-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10535-014-0400-2","pdf_url":"http://bp.ueb.cas.cz/doi/10.1007/s10535-014-0400-2.pdf","source":{"id":"https://openalex.org/S56909845","display_name":"Biologia Plantarum","issn_l":"0006-3134","issn":["0006-3134","1573-8264"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310314217","host_organization_name":"Institute of Experimental Botany of the Czech Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310314217","https://openalex.org/P4310314171"],"host_organization_lineage_names":["Institute of Experimental Botany of the Czech Academy of Sciences","Czech Academy of Sciences"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biologia plantarum","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:447f9f0b8baa475d8b5a700baba421cb","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/447f9f0b8baa475d8b5a700baba421cb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Biologia Plantarum, Vol 58, Iss 2, Pp 209-217 (2014)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1007/s10535-014-0400-2","doi":"https://doi.org/10.1007/s10535-014-0400-2","is_oa":true,"landing_page_url":"https://doi.org/10.1007/s10535-014-0400-2","pdf_url":"http://bp.ueb.cas.cz/doi/10.1007/s10535-014-0400-2.pdf","source":{"id":"https://openalex.org/S56909845","display_name":"Biologia Plantarum","issn_l":"0006-3134","issn":["0006-3134","1573-8264"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-c","jufo-1","norway-1","oarl","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310314217","host_organization_name":"Institute of Experimental Botany of the Czech Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310314217","https://openalex.org/P4310314171"],"host_organization_lineage_names":["Institute of Experimental Botany of the Czech Academy of Sciences","Czech Academy of Sciences"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Biologia plantarum","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.8409000039100647}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1998715020.pdf","grobid_xml":"https://content.openalex.org/works/W1998715020.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1547768852","https://openalex.org/W1937845493","https://openalex.org/W1965584075","https://openalex.org/W1965627385","https://openalex.org/W1966992607","https://openalex.org/W1970908974","https://openalex.org/W1971058161","https://openalex.org/W1971275908","https://openalex.org/W1977097029","https://openalex.org/W1990602071","https://openalex.org/W1992810493","https://openalex.org/W1995986831","https://openalex.org/W1997897612","https://openalex.org/W2012297487","https://openalex.org/W2024556021","https://openalex.org/W2035647169","https://openalex.org/W2047269631","https://openalex.org/W2049617310","https://openalex.org/W2050607290","https://openalex.org/W2060381220","https://openalex.org/W2075015345","https://openalex.org/W2075324691","https://openalex.org/W2076432628","https://openalex.org/W2082286638","https://openalex.org/W2087088324","https://openalex.org/W2090161633","https://openalex.org/W2090795516","https://openalex.org/W2091074934","https://openalex.org/W2100837269","https://openalex.org/W2101108802","https://openalex.org/W2105532543","https://openalex.org/W2109996321","https://openalex.org/W2112208205","https://openalex.org/W2119204447","https://openalex.org/W2121467267","https://openalex.org/W2128635872","https://openalex.org/W2160206954","https://openalex.org/W2169659855","https://openalex.org/W2904473752","https://openalex.org/W4236247700"],"related_works":["https://openalex.org/W2169659855","https://openalex.org/W2793237611","https://openalex.org/W1966992607","https://openalex.org/W2232898978","https://openalex.org/W2752214617","https://openalex.org/W2617457249","https://openalex.org/W2001500108","https://openalex.org/W7221838781","https://openalex.org/W2038706250","https://openalex.org/W2082286638"],"abstract_inverted_index":{"Extracellular":[0],"proteins":[1,32,121,157,279],"and":[2,33,52,67,69,94,108,125,128,137,193],"glycoproteins":[3,34,91,131,222],"secreted":[4],"by":[5,84,161],"ammonium-":[6,237],"or":[7,206,238],"auxin-induced":[8],"somatic":[9,150],"embryogenic":[10,25,266],"cultures":[11,101,144,270],"of":[12,30,44,48,78,156,169,197,214,220,251,261],"pumpkin":[13,215,265],"were":[14,35,96,158],"analyzed.":[15],"Despite":[16],"an":[17,70],"overall":[18],"similarity":[19],"in":[20,59,99,103,109,141,264,269,272],"developmental":[21],"characteristics":[22],"between":[23],"these":[24,278],"cultures,":[26,267],"distinct":[27],"expression":[28],"patterns":[29,168],"extracellular":[31,64,90,120,221],"observed.":[36],"Ammonium,":[37],"when":[38],"supplied":[39],"as":[40],"the":[41,49,60,76,198,233,236,259,273],"sole":[42],"source":[43],"nitrogen,":[45],"caused":[46],"acidification":[47],"culture":[50],"medium":[51,62,107,111],"significantly":[53],"reduced":[54],"protein":[55,65],"secretion.":[56],"Buffering":[57],"pH":[58],"ammonium-containing":[61,106,275],"restored":[63],"secretion":[66],"glycosylation":[68],"enhanced":[71],"cell":[72],"aggregation":[73],"but":[74],"not":[75,209],"development":[77,250],"later":[79,252],"embryo":[80,216,253],"stages.":[81,254],"As":[82],"revealed":[83,258],"Concavalin":[85],"A":[86],"(Con":[87],"A)":[88],"immunodetection,":[89],"containing":[92],"\u03b1-D-mannose":[93],"\u03b1-D-glucose":[95],"most":[97],"abundant":[98],"proembryogenic":[100,143],"grown":[102,271],"a":[104,110,147,242],"buffered":[105,274],"supplemented":[112],"with":[113,164,177,180,188,223,249],"2,4-dichlorophenoxyacetic":[114],"acid":[115],"(2,4-D).":[116],"We":[117],"assume":[118],"that":[119,203],"(Mr":[122,132],"28,":[123],"31,":[124],"44":[126],"kDa)":[127,139],"Con":[129,181],"Abinding":[130],"26,":[133],"30,":[134],"40,":[135],"53,":[136],"100":[138],"found":[140],"both":[142],"may":[145],"have":[146],"role":[148],"during":[149],"embryogenesis":[151],"induction.":[152],"The":[153,218],"glycan":[154],"components":[155],"further":[159],"characterized":[160],"affinity":[162],"blotting":[163],"different":[165],"lectins.":[166],"Binding":[167],"mannose-specific":[170],"lectin":[171],"from":[172,190,226,235],"Galanthus":[173],"nivalis":[174],"partially":[175],"correlated":[176],"those":[178],"detected":[179],"A,":[182],"whereas":[183],"no":[184],"signal":[185],"was":[186],"observed":[187,231],"lectins":[189],"Datura":[191],"stramonium":[192],"Arachis":[194],"hypogea":[195],"regardless":[196],"treatment":[199],"applied.":[200],"Results":[201],"indicate":[202],"complex":[204],"N-":[205],"O-glycans":[207],"are":[208],"typical":[210],"for":[211],"early":[212],"phases":[213],"development.":[217],"accumulation":[219],"high-mannose-type":[224],"glycans":[225],"30":[227],"to":[228,246],"34":[229],"kDa,":[230],"after":[232],"transfer":[234],"2,4-D-containing":[239],"media":[240],"into":[241],"maturation":[243],"medium,":[244,276],"appeared":[245],"be":[247,281],"associated":[248],"This":[255],"study":[256],"also":[257],"presence":[260],"EP-3-like":[262],"endochitinases":[263],"particularly":[268],"however,":[277],"should":[280],"examined":[282],"further.":[283]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
