{"id":"https://openalex.org/W1998282131","doi":"https://doi.org/10.1094/mpmi-20-0063","title":"The Genomic Dynamics and Evolutionary Mechanism of the Pi2/9 Locus in Rice","display_name":"The Genomic Dynamics and Evolutionary Mechanism of the Pi2/9 Locus in Rice","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1998282131","doi":"https://doi.org/10.1094/mpmi-20-0063","mag":"1998282131","pmid":"https://pubmed.ncbi.nlm.nih.gov/17249423"},"language":"en","primary_location":{"id":"doi:10.1094/mpmi-20-0063","doi":"https://doi.org/10.1094/mpmi-20-0063","is_oa":false,"landing_page_url":"https://doi.org/10.1094/mpmi-20-0063","pdf_url":null,"source":{"id":"https://openalex.org/S88768767","display_name":"Molecular Plant-Microbe Interactions","issn_l":"0894-0282","issn":["0894-0282","1943-7706"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant-Microbe Interactions\u00ae","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075749676","display_name":"Bo Zhou","orcid":"https://orcid.org/0000-0001-9631-954X","observed_orcids":["https://orcid.org/0000-0001-9631-954X"]},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bo Zhou","raw_affiliation_strings":["Department of Plant Pathology, Ohio State University, Columbus OH 43210, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Pathology, Ohio State University, Columbus OH 43210, USA","institution_ids":["https://openalex.org/I52357470"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108413878","display_name":"Maureen Dolan","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maureen Dolan","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001474799","display_name":"Hajime Sakai","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hajime Sakai","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100621243","display_name":"Guo\u2010Liang Wang","orcid":"https://orcid.org/0000-0001-8877-3064","observed_orcids":["https://orcid.org/0000-0001-8877-3064"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guo-Liang Wang","raw_affiliation_strings":["Corresponding author: Guo-Liang Wang; Department of Plant Pathology, 201 Kottman Hall, 2021 Coffey Rd.; Telephone: +1.614.292.9280 (O) or +1.614.292.8231 (Lab); Fax: +1.614.292.4455; E-mail: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","Department of Plant Pathology, 201 Kottman Hall, 2021 Coffey Rd","E-mail: \n                    E-mail Address:\n                    [email\u00a0protected]","Fax: +1.614.292.4455","Telephone: +1.614.292.9280 (O) or +1.614.292.8231 (Lab)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Corresponding author: Guo-Liang Wang; Department of Plant Pathology, 201 Kottman Hall, 2021 Coffey Rd.; Telephone: +1.614.292.9280 (O) or +1.614.292.8231 (Lab); Fax: +1.614.292.4455; E-mail: \r\n                    E-mail Address:\r\n                    [email\u00a0protected]","institution_ids":[]},{"raw_affiliation_string":"Department of Plant Pathology, 201 Kottman Hall, 2021 Coffey Rd","institution_ids":[]},{"raw_affiliation_string":"E-mail: \n                    E-mail Address:\n                    [email\u00a0protected]","institution_ids":[]},{"raw_affiliation_string":"Fax: +1.614.292.4455","institution_ids":[]},{"raw_affiliation_string":"Telephone: +1.614.292.9280 (O) or +1.614.292.8231 (Lab)","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3000,"currency":"USD","value_usd":3000},"apc_paid":null,"fwci":4.5294,"has_fulltext":false,"cited_by_count":75,"citation_normalized_percentile":{"value":0.93678234,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"20","issue":"1","first_page":"63","last_page":"71"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.8036999702453613,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.8036999702453613,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.10999999940395355,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.03530000150203705,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rice","display_name":"rice","score":0.7379999756813049},{"id":"https://openalex.org/keywords/magnaporthe-grisea","display_name":"Magnaporthe grisea","score":0.9769999980926514},{"id":"https://openalex.org/keywords/nbs-lrr-genes","display_name":"NBS-LRR genes","score":0.7879999876022339},{"id":"https://openalex.org/keywords/disease-resistance-genes","display_name":"disease resistance genes","score":0.8119999766349792},{"id":"https://openalex.org/keywords/paralogs","display_name":"paralogs","score":0.6349999904632568},{"id":"https://openalex.org/keywords/orthologs","display_name":"orthologs","score":0.9879999756813049},{"id":"https://openalex.org/keywords/haplotypes","display_name":"haplotypes","score":0.6470000147819519},{"id":"https://openalex.org/keywords/intron-evolution","display_name":"intron evolution","score":0.38100001215934753},{"id":"https://openalex.org/keywords/5-regulatory-region","display_name":"5' regulatory region","score":0.8989999890327454}],"concepts":[{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.8229139447212219},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.818934977054596},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.7785323858261108},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.7394681572914124},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.6430355906486511},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.6281514763832092},{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.6241467595100403},{"id":"https://openalex.org/C171578705","wikidata":"https://www.wikidata.org/wiki/Q5418700","display_name":"Evolutionary dynamics","level":3,"score":0.4160735607147217},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.2424369752407074},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.05917438864707947},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000090263","descriptor_name":"Leucine-Rich Repeat Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006239","descriptor_name":"Haplotypes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010940","descriptor_name":"Plant Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1094/mpmi-20-0063","doi":"https://doi.org/10.1094/mpmi-20-0063","is_oa":false,"landing_page_url":"https://doi.org/10.1094/mpmi-20-0063","pdf_url":null,"source":{"id":"https://openalex.org/S88768767","display_name":"Molecular Plant-Microbe Interactions","issn_l":"0894-0282","issn":["0894-0282","1943-7706"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","jufo-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320276","host_organization_name":"American Phytopathological Society","host_organization_lineage":["https://openalex.org/P4310320276"],"host_organization_lineage_names":["American Phytopathological Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular Plant-Microbe Interactions\u00ae","raw_type":"journal-article"},{"id":"pmid:17249423","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17249423","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Molecular plant-microbe interactions : MPMI","raw_type":"Journal Article"},{"id":"pmh:oai:doaj.org/article:f362d48192b4466a81c69ce89a6b2acd","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/f362d48192b4466a81c69ce89a6b2acd","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Molecular Plant-Microbe Interactions, Vol 20, Iss 1, Pp 63-71 (2007)","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8409000039100647,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":48,"referenced_works":["https://openalex.org/W257125427","https://openalex.org/W791550880","https://openalex.org/W1518701384","https://openalex.org/W1796126005","https://openalex.org/W1863643864","https://openalex.org/W1971231926","https://openalex.org/W1976043966","https://openalex.org/W1976326910","https://openalex.org/W1981618829","https://openalex.org/W1984675152","https://openalex.org/W1988306770","https://openalex.org/W2000520335","https://openalex.org/W2015458952","https://openalex.org/W2032118475","https://openalex.org/W2057081312","https://openalex.org/W2057149047","https://openalex.org/W2072229642","https://openalex.org/W2074785145","https://openalex.org/W2075130941","https://openalex.org/W2094051433","https://openalex.org/W2097382368","https://openalex.org/W2098067694","https://openalex.org/W2100464143","https://openalex.org/W2100684388","https://openalex.org/W2108624927","https://openalex.org/W2108780882","https://openalex.org/W2111232620","https://openalex.org/W2121096658","https://openalex.org/W2124270664","https://openalex.org/W2125721380","https://openalex.org/W2133126366","https://openalex.org/W2136728676","https://openalex.org/W2138405903","https://openalex.org/W2140177375","https://openalex.org/W2150148265","https://openalex.org/W2156434383","https://openalex.org/W2156611167","https://openalex.org/W2160364329","https://openalex.org/W2164075646","https://openalex.org/W2164097303","https://openalex.org/W2165398340","https://openalex.org/W2166773117","https://openalex.org/W2168253026","https://openalex.org/W2175948239","https://openalex.org/W2364343895","https://openalex.org/W2772065758","https://openalex.org/W7098838276","https://openalex.org/W7099585975"],"related_works":["https://openalex.org/W34398122","https://openalex.org/W2084075763","https://openalex.org/W2061845884","https://openalex.org/W2105412849","https://openalex.org/W2465559157","https://openalex.org/W2156611167","https://openalex.org/W6957652508","https://openalex.org/W2015458952","https://openalex.org/W2140509396","https://openalex.org/W2040335548"],"abstract_inverted_index":{"The":[0,64],"Pi2/9":[1,47,52,136],"locus":[2,53],"contains":[3],"at":[4,54,87],"least":[5],"four":[6],"resistance":[7],"specificities":[8],"to":[9,14,72,158],"Magnaporthe":[10],"grisea":[11],"and":[12,30,57,81,101,105,149,188],"belongs":[13],"a":[15,84,97],"gene":[16],"complex":[17,195],"comprised":[18],"of":[19,45,134,152,160,172,191],"multiple":[20],"genes":[21,66],"that":[22,141],"encode":[23],"highly":[24,121],"homologous":[25],"nucleotide":[26],"binding":[27],"site":[28],"(NBS)":[29],"leucine":[31],"rich":[32],"repeat":[33],"(LRR)":[34],"proteins.":[35],"To":[36],"investigate":[37],"the":[38,43,46,51,55,68,73,88,91,113,115,132,135,145,153,164,170,173,185],"genetic":[39],"events":[40],"involved":[41],"in":[42,60,67,144,196],"evolution":[44,133],"locus,":[48],"we":[49],"analyzed":[50],"inter-":[56],"intralocus":[58],"levels":[59],"five":[61,69],"rice":[62,78,177],"cultivars.":[63,178],"NBS-LRR":[65,79,193],"cultivars":[70],"belong":[71],"same":[74],"phylogenetic":[75],"clade":[76],"among":[77,176],"genes,":[80],"all":[82],"have":[83,156],"phase-2":[85],"intron":[86,104],"N-terminus.":[89],"However,":[90],"paralogs":[92,154,165],"within":[93,166],"each":[94,167],"haplotype":[95],"show":[96],"significant":[98],"sequence":[99,142],"divergence":[100],"their":[102],"N-terminal":[103,150],"5'":[106,146],"regulatory":[107,147],"regions":[108,148],"are":[109,120],"very":[110],"different.":[111],"On":[112],"contrary,":[114],"orthologs":[116],"from":[117],"different":[118],"haplotypes":[119],"similar,":[122],"indicating":[123],"an":[124,192],"obvious":[125],"orthologous":[126,174],"relationship":[127,175],"has":[128],"been":[129],"maintained":[130],"during":[131],"locus.":[137],"These":[138],"results":[139],"suggest":[140],"diversification":[143],"introns":[151],"may":[155],"led":[157],"suppression":[159],"meiotic":[161],"recombination":[162],"between":[163],"haplotype,":[168],"facilitating":[169],"maintenance":[171],"Our":[179],"observations":[180],"provide":[181],"valuable":[182],"insight":[183],"into":[184],"genomic":[186],"dynamics":[187],"evolutionary":[189],"mechanism":[190],"resistance-gene":[194],"rice.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":7}],"updated_date":"2026-11-07T11:25:07.637180","created_date":"2016-06-24T00:00:00"}
