{"id":"https://openalex.org/W1998116559","doi":"https://doi.org/10.1107/s1744309112051445","title":"Crystallization and preliminary crystallographic analysis of two eukaryotic fructosyl peptide oxidases","display_name":"Crystallization and preliminary crystallographic analysis of two eukaryotic fructosyl peptide oxidases","publication_year":2013,"publication_date":"2013-01-30","ids":{"openalex":"https://openalex.org/W1998116559","doi":"https://doi.org/10.1107/s1744309112051445","mag":"1998116559","pmid":"https://pubmed.ncbi.nlm.nih.gov/23385752","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3564613"},"language":"en","primary_location":{"id":"doi:10.1107/s1744309112051445","doi":"https://doi.org/10.1107/s1744309112051445","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s1744309112051445","pdf_url":"http://journals.iucr.org/f/issues/2013/02/00/no5009/no5009.pdf","source":{"id":"https://openalex.org/S4210231712","display_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","issn_l":"1744-3091","issn":["1744-3091"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"http://journals.iucr.org/f/issues/2013/02/00/no5009/no5009.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042065067","display_name":"Atsushi Ichiyanagi","orcid":"https://orcid.org/0000-0002-6863-6086","observed_orcids":["https://orcid.org/0000-0002-6863-6086"]},"institutions":[{"id":"https://openalex.org/I13045471","display_name":"Kikkoman (Japan)","ror":"https://ror.org/00z0d6447","country_code":"JP","type":"company","lineage":["https://openalex.org/I13045471"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Atsushi Ichiyanagi","raw_affiliation_strings":["Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan. aichiyanagi@mail.kikkoman.co.jp","Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan. aichiyanagi@mail.kikkoman.co.jp","institution_ids":["https://openalex.org/I13045471"]},{"raw_affiliation_string":"Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan","institution_ids":["https://openalex.org/I13045471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009360016","display_name":"Kozo Hirokawa","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I13045471","display_name":"Kikkoman (Japan)","ror":"https://ror.org/00z0d6447","country_code":"JP","type":"company","lineage":["https://openalex.org/I13045471"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kozo Hirokawa","raw_affiliation_strings":["Edogawa Plant, Kikkoman Biochemifa Company, 376-2 Kamihanawa, Noda-shi, Chiba 278-0033, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Edogawa Plant, Kikkoman Biochemifa Company, 376-2 Kamihanawa, Noda-shi, Chiba 278-0033, Japan","institution_ids":["https://openalex.org/I13045471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067859013","display_name":"Keiko Gomi","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I13045471","display_name":"Kikkoman (Japan)","ror":"https://ror.org/00z0d6447","country_code":"JP","type":"company","lineage":["https://openalex.org/I13045471"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keiko Gomi","raw_affiliation_strings":["Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan","institution_ids":["https://openalex.org/I13045471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057464547","display_name":"Toru Nakatsu","orcid":"https://orcid.org/0000-0002-9582-4023","observed_orcids":["https://orcid.org/0000-0002-9582-4023"]},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Toru Nakatsu","raw_affiliation_strings":["Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Yoshida Shimoadachi-cho, Sakyo-ku, Kyoto 606-8501, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Yoshida Shimoadachi-cho, Sakyo-ku, Kyoto 606-8501, Japan","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064027488","display_name":"Hiroaki Kato","orcid":"https://orcid.org/0000-0002-5993-4532","observed_orcids":["https://orcid.org/0000-0002-5993-4532"]},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroaki Kato","raw_affiliation_strings":["Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Yoshida Shimoadachi-cho, Sakyo-ku, Kyoto 606-8501, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Pharmaceutical Sciences, Kyoto University, 46-29 Yoshida Shimoadachi-cho, Sakyo-ku, Kyoto 606-8501, Japan","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059029302","display_name":"Naoki Kajiyama","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I13045471","display_name":"Kikkoman (Japan)","ror":"https://ror.org/00z0d6447","country_code":"JP","type":"company","lineage":["https://openalex.org/I13045471"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoki Kajiyama","raw_affiliation_strings":["Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research and Development Division, Kikkoman Corporation, 399 Noda, Noda-shi, Chiba 278-0037, Japan","institution_ids":["https://openalex.org/I13045471"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1433,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.4181297,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"69","issue":"2","first_page":"130","last_page":"133"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10464","display_name":"Crystal structures of chemical compounds","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1604","display_name":"Inorganic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-crystallization","display_name":"protein crystallization","score":0.6660000085830688},{"id":"https://openalex.org/keywords/thermostable-mutants","display_name":"thermostable mutants","score":0.8610000014305115},{"id":"https://openalex.org/keywords/diabetes-diagnosis","display_name":"diabetes diagnosis","score":0.871999979019165}],"concepts":[{"id":"https://openalex.org/C61276311","wikidata":"https://www.wikidata.org/wiki/Q624543","display_name":"Monoclinic crystal system","level":3,"score":0.7433017492294312},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.675330638885498},{"id":"https://openalex.org/C170751736","wikidata":"https://www.wikidata.org/wiki/Q503601","display_name":"Tetragonal crystal system","level":3,"score":0.6727259159088135},{"id":"https://openalex.org/C203036418","wikidata":"https://www.wikidata.org/wiki/Q284256","display_name":"Crystallization","level":2,"score":0.5926414728164673},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5330865383148193},{"id":"https://openalex.org/C2778460671","wikidata":"https://www.wikidata.org/wiki/Q485277","display_name":"Histidine","level":3,"score":0.5061883330345154},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.4368101954460144},{"id":"https://openalex.org/C115624301","wikidata":"https://www.wikidata.org/wiki/Q895901","display_name":"Crystal structure","level":2,"score":0.4267634153366089},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.3221031129360199},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.18542832136154175},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.15089285373687744},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.07305458188056946}],"mesh":[{"descriptor_ui":"D000594","descriptor_name":"Amino Acid Oxidoreductases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D003460","descriptor_name":"Crystallization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004591","descriptor_name":"Electrophoresis, Polyacrylamide Gel","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018360","descriptor_name":"Crystallography, X-Ray","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D032641","descriptor_name":"Eurotiales","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":true},{"descriptor_ui":"D055324","descriptor_name":"Eupenicillium","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1107/s1744309112051445","doi":"https://doi.org/10.1107/s1744309112051445","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s1744309112051445","pdf_url":"http://journals.iucr.org/f/issues/2013/02/00/no5009/no5009.pdf","source":{"id":"https://openalex.org/S4210231712","display_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","issn_l":"1744-3091","issn":["1744-3091"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3564613","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3564613","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallogr Sect F Struct Biol Cryst Commun","raw_type":"Text"},{"id":"pmid:23385752","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23385752","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta crystallographica. Section F, Structural biology and crystallization communications","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1107/s1744309112051445","doi":"https://doi.org/10.1107/s1744309112051445","is_oa":true,"landing_page_url":"https://doi.org/10.1107/s1744309112051445","pdf_url":"http://journals.iucr.org/f/issues/2013/02/00/no5009/no5009.pdf","source":{"id":"https://openalex.org/S4210231712","display_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","issn_l":"1744-3091","issn":["1744-3091"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[{"id":"https://openalex.org/G420064510","display_name":"Protein interaction analysis of circadian clock protein","funder_award_id":"22370037","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G5308777187","display_name":"Creation of a high efficient luciferase","funder_award_id":"23659021","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1998116559.pdf","grobid_xml":"https://content.openalex.org/works/W1998116559.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W176719263","https://openalex.org/W1569048146","https://openalex.org/W1911209142","https://openalex.org/W1931586538","https://openalex.org/W2006040570","https://openalex.org/W2014694459","https://openalex.org/W2018289835","https://openalex.org/W2018708011","https://openalex.org/W2036555249","https://openalex.org/W2043625875","https://openalex.org/W2058134930","https://openalex.org/W2063366649","https://openalex.org/W2073620575","https://openalex.org/W2081292320","https://openalex.org/W2100837269","https://openalex.org/W2104017463","https://openalex.org/W2108921801","https://openalex.org/W2124600540","https://openalex.org/W2146080841"],"related_works":["https://openalex.org/W2085108178","https://openalex.org/W2060016057","https://openalex.org/W2093638638","https://openalex.org/W3049756521","https://openalex.org/W2063366649","https://openalex.org/W2907415503","https://openalex.org/W7213547602","https://openalex.org/W1980334850","https://openalex.org/W2039226914","https://openalex.org/W2006040570"],"abstract_inverted_index":{"Fructosyl":[0],"peptide":[1],"oxidase":[2],"(FPOX)":[3],"catalyses":[4],"the":[5,18,35,45,68],"oxidation":[6],"of":[7,20,27,41,64,91],"\u03b1-glycated":[8],"dipeptides":[9],"such":[10],"as":[11],"N(\u03b1)-(1-deoxy-D-fructos-1-yl)-L-valyl-L-histidine":[12],"(Fru-ValHis)":[13],"and":[14,30,62,93,98],"is":[15],"used":[16],"in":[17],"diagnosis":[19],"diabetes":[21],"mellitus.":[22],"Here,":[23],"two":[24],"thermostable":[25],"mutants":[26],"FPOX,":[28],"CFP-T7":[29,42,92],"EFP-T5M,":[31],"were":[32],"crystallized":[33],"by":[34],"sitting-drop":[36],"vapour-diffusion":[37],"method.":[38],"The":[39,89],"crystal":[40],"belonged":[43,66],"to":[44,67,96],"tetragonal":[46],"space":[47,70],"group":[48,71],"P4(1)2(1)2,":[49],"with":[50,73],"unit-cell":[51,74],"parameters":[52,75],"a":[53,76],"=":[54,56,59,77,80,83,87],"b":[55,79],"110.09,":[57],"c":[58,82],"220.48":[60],"\u00c5,":[61,85],"that":[63],"EFP-T5M":[65,94],"monoclinic":[69],"P2(1),":[72],"43.00,":[78],"230.05,":[81],"47.27":[84],"\u03b2":[86],"116.99\u00b0.":[88],"crystals":[90],"diffracted":[95],"1.8":[97],"1.6":[99],"\u00c5":[100],"resolution,":[101],"respectively.":[102]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
