{"id":"https://openalex.org/W1970968485","doi":"https://doi.org/10.1186/1471-2164-15-823","title":"A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array","display_name":"A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array","publication_year":2014,"publication_date":"2014-09-29","ids":{"openalex":"https://openalex.org/W1970968485","doi":"https://doi.org/10.1186/1471-2164-15-823","mag":"1970968485","pmid":"https://pubmed.ncbi.nlm.nih.gov/25266061","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/4192734"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2164-15-823","doi":"https://doi.org/10.1186/1471-2164-15-823","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-15-823","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-15-823","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-15-823","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030946174","display_name":"Sandra Unterseer","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sandra Unterseer","raw_affiliation_strings":["Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064145500","display_name":"Eva Bauer","orcid":"https://orcid.org/0000-0002-4820-2846","observed_orcids":["https://orcid.org/0000-0002-4820-2846"]},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Eva Bauer","raw_affiliation_strings":["Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354 Freising, Germany. e.bauer@tum.de","Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354 Freising, Germany. e.bauer@tum.de","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058614739","display_name":"Georg Haberer","orcid":"https://orcid.org/0000-0002-6612-6939","observed_orcids":["https://orcid.org/0000-0002-6612-6939"]},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Munich","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Georg Haberer","raw_affiliation_strings":["Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001939846","display_name":"Michael A. Seidel","orcid":"https://orcid.org/0000-0003-2074-6443","observed_orcids":["https://orcid.org/0000-0003-2074-6443"]},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Munich","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Seidel","raw_affiliation_strings":["Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051912592","display_name":"Carsten Knaak","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210117644","display_name":"KWS Saat (Germany)","ror":"https://ror.org/02p9c1e58","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210117644"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Carsten Knaak","raw_affiliation_strings":["KWS SAAT AG, 37555, Einbeck, Germany","KWS SAAT AG, Einbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KWS SAAT AG, 37555, Einbeck, Germany","institution_ids":["https://openalex.org/I4210117644"]},{"raw_affiliation_string":"KWS SAAT AG, Einbeck, Germany","institution_ids":["https://openalex.org/I4210117644"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019853316","display_name":"Milena Ouzunova","orcid":"https://orcid.org/0000-0003-3320-0888","observed_orcids":["https://orcid.org/0000-0003-3320-0888"]},"institutions":[{"id":"https://openalex.org/I4210117644","display_name":"KWS Saat (Germany)","ror":"https://ror.org/02p9c1e58","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210117644"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Milena Ouzunova","raw_affiliation_strings":["KWS SAAT AG, 37555, Einbeck, Germany","KWS SAAT AG, Einbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"KWS SAAT AG, 37555, Einbeck, Germany","institution_ids":["https://openalex.org/I4210117644"]},{"raw_affiliation_string":"KWS SAAT AG, Einbeck, Germany","institution_ids":["https://openalex.org/I4210117644"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006468847","display_name":"Thomas Meitinger","orcid":"https://orcid.org/0000-0002-8838-8403","observed_orcids":["https://orcid.org/0000-0002-8838-8403"]},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Munich","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I4405260296","display_name":"Institut f\u00fcr Humangenetik","ror":"https://ror.org/03hxyy717","country_code":"DE","type":"facility","lineage":["https://openalex.org/I3018771216","https://openalex.org/I4405260296","https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Meitinger","raw_affiliation_strings":["Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I4405260296"]},{"raw_affiliation_string":"Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I4405260296"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110219194","display_name":"Tim Matthias Strom","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Munich","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]},{"id":"https://openalex.org/I4405260296","display_name":"Institut f\u00fcr Humangenetik","ror":"https://ror.org/03hxyy717","country_code":"DE","type":"facility","lineage":["https://openalex.org/I3018771216","https://openalex.org/I4405260296","https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tim M Strom","raw_affiliation_strings":["Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I4405260296"]},{"raw_affiliation_string":"Institute of Human Genetics, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672","https://openalex.org/I4405260296"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079503429","display_name":"Ruedi Fries","orcid":"https://orcid.org/0000-0002-4657-1787","observed_orcids":["https://orcid.org/0000-0002-4657-1787"]},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ruedi Fries","raw_affiliation_strings":["Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000493727","display_name":"Hubert Pausch","orcid":"https://orcid.org/0000-0002-0501-6760","observed_orcids":["https://orcid.org/0000-0002-0501-6760"]},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hubert Pausch","raw_affiliation_strings":["Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Animal Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014013574","display_name":"Christofer Bertani","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4387155803","display_name":"Affymetrix (United States)","ror":"https://ror.org/012kjw534","country_code":"US","type":"company","lineage":["https://openalex.org/I4210142480","https://openalex.org/I4387155803"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christofer Bertani","raw_affiliation_strings":["Affymetrix Inc., Santa Clara, CA, 95051, USA","Affymetrix, Inc.,, Santa Clara, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Affymetrix Inc., Santa Clara, CA, 95051, USA","institution_ids":["https://openalex.org/I4387155803"]},{"raw_affiliation_string":"Affymetrix, Inc.,, Santa Clara, USA","institution_ids":["https://openalex.org/I4387155803"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045924535","display_name":"Alessandro Davassi","orcid":"https://orcid.org/0000-0001-7233-3240","observed_orcids":["https://orcid.org/0000-0001-7233-3240"]},"institutions":[{"id":"https://openalex.org/I4387155803","display_name":"Affymetrix (United States)","ror":"https://ror.org/012kjw534","country_code":"US","type":"company","lineage":["https://openalex.org/I4210142480","https://openalex.org/I4387155803"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alessandro Davassi","raw_affiliation_strings":["Affymetrix Inc., Santa Clara, CA, 95051, USA","Affymetrix, Inc.,, Santa Clara, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Affymetrix Inc., Santa Clara, CA, 95051, USA","institution_ids":["https://openalex.org/I4387155803"]},{"raw_affiliation_string":"Affymetrix, Inc.,, Santa Clara, USA","institution_ids":["https://openalex.org/I4387155803"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047292507","display_name":"Klaus Mayer","orcid":"https://orcid.org/0000-0001-6484-1077","observed_orcids":["https://orcid.org/0000-0001-6484-1077"]},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Munich","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Klaus FX Mayer","raw_affiliation_strings":["Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, 85764, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]},{"raw_affiliation_string":"Plant Genome and System Biology, Helmholtz Zentrum M\u00fcnchen, Neuherberg, Germany","institution_ids":["https://openalex.org/I3018134672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011477310","display_name":"Chris\u2010Carolin Sch\u00f6n","orcid":"https://orcid.org/0000-0001-6067-7900","observed_orcids":["https://orcid.org/0000-0001-6067-7900"]},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Chris-Carolin Sch\u00f6n","raw_affiliation_strings":["Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, 85354, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]},{"raw_affiliation_string":"Plant Breeding, Centre of Life and Food Sciences Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5011477310","https://openalex.org/A5064145500"],"corresponding_institution_ids":["https://openalex.org/I62916508"],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":{"value":1523,"currency":"EUR","value_usd":1642},"fwci":9.9493,"has_fulltext":true,"cited_by_count":306,"citation_normalized_percentile":{"value":0.98841657,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"15","issue":"1","first_page":"823","last_page":"823"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.006599999964237213,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12310","display_name":"Crop Yield and Soil Fertility","score":0.0027000000700354576,"subfield":{"id":"https://openalex.org/subfields/1102","display_name":"Agronomy and Crop Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/maize","display_name":"maize","score":0.9620000123977661},{"id":"https://openalex.org/keywords/snp-genotyping-array","display_name":"SNP genotyping array","score":0.9779999852180481},{"id":"https://openalex.org/keywords/high-density-genotyping","display_name":"high-density genotyping","score":0.6179999709129333},{"id":"https://openalex.org/keywords/small-indels","display_name":"small indels","score":0.777999997138977},{"id":"https://openalex.org/keywords/temperate-maize","display_name":"temperate maize","score":0.6679999828338623},{"id":"https://openalex.org/keywords/population-structure","display_name":"population structure","score":0.6850000023841858},{"id":"https://openalex.org/keywords/linkage-disequilibrium","display_name":"linkage disequilibrium","score":0.9419999718666077},{"id":"https://openalex.org/keywords/founder-lines","display_name":"founder lines","score":0.5099999904632568},{"id":"https://openalex.org/keywords/maize-hybrids","display_name":"maize hybrids","score":0.4490000009536743}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8107763528823853},{"id":"https://openalex.org/C31467283","wikidata":"https://www.wikidata.org/wiki/Q912147","display_name":"Genotyping","level":4,"score":0.7626490592956543},{"id":"https://openalex.org/C163691529","wikidata":"https://www.wikidata.org/wiki/Q7391886","display_name":"SNP genotyping","level":5,"score":0.6410636901855469},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.627774715423584},{"id":"https://openalex.org/C122060243","wikidata":"https://www.wikidata.org/wiki/Q7391885","display_name":"SNP array","level":5,"score":0.6226859092712402},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6151444911956787},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.595341145992279},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5161517858505249},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5075958967208862},{"id":"https://openalex.org/C59701697","wikidata":"https://www.wikidata.org/wiki/Q6895959","display_name":"Molecular Inversion Probe","level":5,"score":0.4305158257484436},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.38825419545173645},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.3311668634414673},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.30015110969543457},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15036624670028687},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.05833849310874939}],"mesh":[{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015810","descriptor_name":"Linkage Disequilibrium","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D060005","descriptor_name":"Genotyping Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":9,"locations":[{"id":"doi:10.1186/1471-2164-15-823","doi":"https://doi.org/10.1186/1471-2164-15-823","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-15-823","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-15-823","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},{"id":"pmh:oai:europepmc.org:3162772","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4192734","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmid:25266061","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25266061","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC genomics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4192734","doi":null,"is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC4192734/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"Text"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1253557","doi":null,"is_oa":false,"landing_page_url":"https://mediatum.ub.tum.de/1253557","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1286438","doi":null,"is_oa":true,"landing_page_url":"http://mediatum.ub.tum.de/node?id=1286438","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:opus-zb.helmholtz-muenchen.de:32476","doi":null,"is_oa":true,"landing_page_url":"https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=32476","pdf_url":null,"source":{"id":"https://openalex.org/S4377196115","display_name":"Site cant be reached","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics 15:823 (2014)","raw_type":"article"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/161514","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/161514","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics, 15","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.3929/ethz-b-000161514","doi":"https://doi.org/10.3929/ethz-b-000161514","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000161514","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/1471-2164-15-823","doi":"https://doi.org/10.1186/1471-2164-15-823","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2164-15-823","pdf_url":"https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-15-823","source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.9208999872207642,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G6802952985","display_name":null,"funder_award_id":"0315528","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"},{"id":"https://openalex.org/F4320311402","display_name":"Universit\u00e4t Hohenheim","ror":"https://ror.org/00b1c9541"},{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320323383","display_name":"Technische Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/02kkvpp62"},{"id":"https://openalex.org/F4320323910","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83"},{"id":"https://openalex.org/F4320332605","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1970968485.pdf","grobid_xml":"https://content.openalex.org/works/W1970968485.grobid-xml"},"referenced_works_count":72,"referenced_works":["https://openalex.org/W1928998639","https://openalex.org/W1970311849","https://openalex.org/W1980195730","https://openalex.org/W1983010434","https://openalex.org/W1983627166","https://openalex.org/W1988345092","https://openalex.org/W1999879305","https://openalex.org/W2001293313","https://openalex.org/W2002036331","https://openalex.org/W2006046663","https://openalex.org/W2014704298","https://openalex.org/W2017586115","https://openalex.org/W2017740478","https://openalex.org/W2018657659","https://openalex.org/W2019915835","https://openalex.org/W2023080716","https://openalex.org/W2024278789","https://openalex.org/W2025023616","https://openalex.org/W2025978835","https://openalex.org/W2029432240","https://openalex.org/W2046809543","https://openalex.org/W2048214264","https://openalex.org/W2051162267","https://openalex.org/W2052731246","https://openalex.org/W2054153086","https://openalex.org/W2055966372","https://openalex.org/W2059542829","https://openalex.org/W2074956582","https://openalex.org/W2074961836","https://openalex.org/W2075490230","https://openalex.org/W2076658876","https://openalex.org/W2078823676","https://openalex.org/W2084371025","https://openalex.org/W2090926990","https://openalex.org/W2093319611","https://openalex.org/W2093693822","https://openalex.org/W2100262918","https://openalex.org/W2100532929","https://openalex.org/W2103441770","https://openalex.org/W2106578986","https://openalex.org/W2106963975","https://openalex.org/W2108234281","https://openalex.org/W2113697014","https://openalex.org/W2114451730","https://openalex.org/W2115623748","https://openalex.org/W2119180969","https://openalex.org/W2119444539","https://openalex.org/W2130244527","https://openalex.org/W2133301154","https://openalex.org/W2135124881","https://openalex.org/W2135168743","https://openalex.org/W2137797806","https://openalex.org/W2139284959","https://openalex.org/W2142486812","https://openalex.org/W2144169294","https://openalex.org/W2145174267","https://openalex.org/W2145792266","https://openalex.org/W2146290595","https://openalex.org/W2149914492","https://openalex.org/W2151409320","https://openalex.org/W2152258425","https://openalex.org/W2155573748","https://openalex.org/W2157316855","https://openalex.org/W2159474015","https://openalex.org/W2160717298","https://openalex.org/W2161633633","https://openalex.org/W2164056841","https://openalex.org/W2168947540","https://openalex.org/W2422198796","https://openalex.org/W2582743722","https://openalex.org/W2588276214","https://openalex.org/W7047375357"],"related_works":["https://openalex.org/W7097703848","https://openalex.org/W3109242282","https://openalex.org/W7099280635","https://openalex.org/W2589114778","https://openalex.org/W4403540753","https://openalex.org/W2001293313","https://openalex.org/W1553595104","https://openalex.org/W7100054007","https://openalex.org/W2043905409","https://openalex.org/W2039351509"],"abstract_inverted_index":{"BACKGROUND:":[0],"High":[1],"density":[2,31,54,280],"genotyping":[3,33,330],"data":[4],"are":[5,203,234],"indispensable":[6],"for":[7,35,83,129,134,151,175,179,217,288,313],"genomic":[8],"analyses":[9,252],"of":[10,21,37,59,98,121,166,182,195,212,223,257,270,317],"complex":[11],"traits":[12],"in":[13,95,206,332],"animal":[14],"and":[15,40,63,79,87,139,146,172,178,198,209,250,262,266,290,294],"crop":[16,25,333],"species.":[17,334],"Maize":[18,188,283],"is":[19,193,286,324],"one":[20],"the":[22,92,96,126,180,183,213,228,255,258,268,325],"most":[23],"important":[24,131],"plants":[26],"worldwide,":[27],"however":[28],"a":[29,52,116,221,239,273,299,314],"high":[30,53,279],"SNP":[32,56,230],"array":[34,57,93,192,259,331],"analysis":[36,177],"its":[38,311],"large":[39],"highly":[41],"dynamic":[42],"genome":[43],"was":[44,295],"not":[45],"available":[46,185,329],"so":[47],"far.":[48],"RESULTS:":[49],"We":[50,154,246],"developed":[51,296],"maize":[55,77,123,136,293],"composed":[58,194],"616,201":[60],"variants":[61,69,102,158,205,233,322],"(SNPs":[62],"small":[64],"indels).":[65],"Initially,":[66],"57":[67],"M":[68,100],"were":[70,149],"discovered":[71],"by":[72,303],"sequencing":[73,170],"30":[74],"representative":[75],"temperate":[76,292],"lines":[78,124,133],"then":[80],"stringently":[81],"filtered":[82],"sequence":[84],"quality":[85,306],"scores":[86],"predicted":[88],"conversion":[89],"performance":[90,162],"on":[91,104,298],"resulting":[94],"selection":[97],"1.2":[99],"polymorphic":[101],"assayed":[103],"two":[105],"screening":[106],"arrays.":[107],"To":[108],"identify":[109],"high-confidence":[110],"variants,":[111,225],"285":[112],"DNA":[113],"samples":[114,127,141],"from":[115,227],"broad":[117,315],"genetic":[118],"diversity":[119],"panel":[120,302],"worldwide":[122,274],"including":[125],"used":[128,150],"sequencing,":[130],"founder":[132],"European":[135,289],"breeding,":[137],"hybrids,":[138],"proprietary":[140],"with":[142],"European,":[143],"US,":[144],"semi-tropical,":[145],"tropical":[147],"origin":[148],"experimental":[152],"validation.":[153],"selected":[155],"616":[156],"k":[157,321],"according":[159],"to":[160,253,260,309],"their":[161],"during":[163],"validation,":[164],"support":[165],"genotype":[167],"calls":[168],"through":[169],"data,":[171],"physical":[173],"distribution":[174],"further":[176],"design":[181],"commercially":[184],"Affymetrix\u00ae":[186,281],"Axiom\u00ae":[187,282],"Genotyping":[189,284],"Array.":[190],"This":[191],"609,442":[196],"SNPs":[197,211],"6,759":[199],"indels.":[200],"Among":[201],"these":[202],"116,224":[204],"coding":[207],"regions":[208],"45,655":[210],"Illumina\u00ae":[214],"MaizeSNP50":[215],"BeadChip":[216],"study":[218],"comparison.":[219],"In":[220],"subset":[222],"45,974":[224],"apart":[226],"target":[229],"additional":[231],"off-target":[232],"detected,":[235],"which":[236],"show":[237],"only":[238],"minor":[240],"bias":[241],"towards":[242],"intermediate":[243],"allele":[244],"frequencies.":[245],"performed":[247],"principal":[248],"coordinate":[249],"admixture":[251],"determine":[254],"ability":[256],"detect":[261],"resolve":[263],"population":[264],"structure":[265],"investigated":[267],"extent":[269],"LD":[271],"within":[272],"validation":[275],"panel.":[276],"CONCLUSIONS:":[277],"The":[278],"Array":[285],"optimized":[287],"American":[291],"based":[297],"diverse":[300],"sample":[301],"applying":[304],"stringent":[305],"filter":[307],"criteria":[308],"ensure":[310],"suitability":[312],"range":[316],"applications.":[318],"With":[319],"600":[320],"it":[323],"largest":[326],"currently":[327],"publically":[328]},"counts_by_year":[{"year":2026,"cited_by_count":17},{"year":2025,"cited_by_count":24},{"year":2024,"cited_by_count":22},{"year":2023,"cited_by_count":25},{"year":2022,"cited_by_count":22},{"year":2021,"cited_by_count":45},{"year":2020,"cited_by_count":36},{"year":2019,"cited_by_count":27},{"year":2018,"cited_by_count":25},{"year":2017,"cited_by_count":28},{"year":2016,"cited_by_count":26},{"year":2015,"cited_by_count":8}],"updated_date":"2026-11-13T13:42:25.865203","created_date":"2016-06-24T00:00:00"}