{"id":"https://openalex.org/W1966418075","doi":"https://doi.org/10.1186/1471-2105-11-s1-s59","title":"Translog, a web browser for studying the expression divergence of homologous genes","display_name":"Translog, a web browser for studying the expression divergence of homologous genes","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1966418075","doi":"https://doi.org/10.1186/1471-2105-11-s1-s59","mag":"1966418075","pmid":"https://pubmed.ncbi.nlm.nih.gov/20122234","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/3009532"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s1-s59","doi":"https://doi.org/10.1186/1471-2105-11-s1-s59","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s59","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S59","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S59","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053690577","display_name":"Xianjun Dong","orcid":"https://orcid.org/0000-0002-8052-9320","observed_orcids":["https://orcid.org/0000-0002-8052-9320"]},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Xianjun Dong","raw_affiliation_strings":["Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway. xianjun.dong@bccs.uib.no","Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008 Bergen, Norway. xianjun.dong@bccs.uib.no","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058400078","display_name":"Altuna Akalin","orcid":"https://orcid.org/0000-0002-0468-0117","observed_orcids":["https://orcid.org/0000-0002-0468-0117"]},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Altuna Akalin","raw_affiliation_strings":["Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","Sars Centre for Marine Molecular Biology, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Sars Centre for Marine Molecular Biology, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102991075","display_name":"Yogita Sharma","orcid":"https://orcid.org/0000-0002-9478-1498","observed_orcids":["https://orcid.org/0000-0002-9478-1498"]},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Yogita Sharma","raw_affiliation_strings":["Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052661284","display_name":"Boris Lenhard","orcid":"https://orcid.org/0000-0002-1114-1509","observed_orcids":["https://orcid.org/0000-0002-1114-1509"]},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Boris Lenhard","raw_affiliation_strings":["Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","Sars Centre for Marine Molecular Biology, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Sars Centre for Marine Molecular Biology, University of Bergen, Thorm\u00f8hlensgate 55, N-5008, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5053690577"],"corresponding_institution_ids":["https://openalex.org/I4432739"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.07895393,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"11","issue":"S1","first_page":"S59","last_page":"S59"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.5820000171661377,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.5820000171661377,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.37380000948905945,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.017500000074505806,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/expression-divergence","display_name":"expression divergence","score":0.7289999723434448},{"id":"https://openalex.org/keywords/homologous-genes","display_name":"homologous genes","score":0.996999979019165},{"id":"https://openalex.org/keywords/duplicated-genes","display_name":"duplicate genes","score":0.8999999761581421},{"id":"https://openalex.org/keywords/translog","display_name":"Translog","score":0.625},{"id":"https://openalex.org/keywords/web-based-visualization-tool","display_name":"web-based visualization tool","score":0.796999990940094},{"id":"https://openalex.org/keywords/transcriptome-comparison","display_name":"transcriptome comparison","score":0.746999979019165},{"id":"https://openalex.org/keywords/promoter-analysis","display_name":"promoter analysis","score":0.47699999809265137},{"id":"https://openalex.org/keywords/transcription-initiation","display_name":"transcription initiation","score":0.6840000152587891},{"id":"https://openalex.org/keywords/cage","display_name":"CAGE","score":0.6940000057220459},{"id":"https://openalex.org/keywords/exon-intron-structure","display_name":"exon-intron structure","score":0.9390000104904175},{"id":"https://openalex.org/keywords/genomic-neighborhood","display_name":"genomic neighborhood","score":0.6930000185966492},{"id":"https://openalex.org/keywords/synteny-conservation","display_name":"synteny conservation","score":0.8080000281333923},{"id":"https://openalex.org/keywords/whole-genome-doubling","display_name":"whole-genome duplication","score":0.7789999842643738},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.6990000009536743}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7008863687515259},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.635979413986206},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5901004672050476},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5874051451683044},{"id":"https://openalex.org/C53702515","wikidata":"https://www.wikidata.org/wiki/Q971246","display_name":"Synteny","level":4,"score":0.546654462814331},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5396537780761719},{"id":"https://openalex.org/C64894306","wikidata":"https://www.wikidata.org/wiki/Q849622","display_name":"Homologous chromosome","level":3,"score":0.5329820513725281},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4851456582546234},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4525241255760193},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.42045527696609497},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2699042558670044}],"mesh":[{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-11-s1-s59","doi":"https://doi.org/10.1186/1471-2105-11-s1-s59","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s59","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S59","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3009532","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3009532","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmid:20122234","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20122234","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:edoc.mdc-berlin.de:14468","doi":null,"is_oa":false,"landing_page_url":"http://edoc.mdc-berlin.de/14468/1/14468oa.pdf","pdf_url":"http://edoc.mdc-berlin.de/14468/1/14468oa.pdf","source":{"id":"https://openalex.org/S4306400224","display_name":"MDC Repository (Max-Delbrueck-Center for Molecular Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:bora.uib.no:1956/4368","doi":null,"is_oa":true,"landing_page_url":"http://hdl.handle.net/1956/4368","pdf_url":null,"source":{"id":"https://openalex.org/S7407064446","display_name":"NORA - Norwegian Open Research Archives","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"S59","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:93dc063f548d4851bcd2c74b0beef326","doi":null,"is_oa":false,"landing_page_url":"https://doaj.org/article/93dc063f548d4851bcd2c74b0beef326","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss Suppl 1, p S59 (2010)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s1-s59","doi":"https://doi.org/10.1186/1471-2105-11-s1-s59","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s59","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S59","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-class-a","anvur-scientific","ccf-c","cwts-core","doaj","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"},{"id":"https://openalex.org/F4320323898","display_name":"Bergens Forskningsstiftelse","ror":"https://ror.org/04efaep75"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1966418075.pdf","grobid_xml":"https://content.openalex.org/works/W1966418075.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W209659943","https://openalex.org/W1977294183","https://openalex.org/W2007771322","https://openalex.org/W2008779172","https://openalex.org/W2019462186","https://openalex.org/W2024135949","https://openalex.org/W2033831809","https://openalex.org/W2040308159","https://openalex.org/W2049569197","https://openalex.org/W2057250255","https://openalex.org/W2059106785","https://openalex.org/W2063593640","https://openalex.org/W2091203297","https://openalex.org/W2099451735","https://openalex.org/W2106782757","https://openalex.org/W2109521571","https://openalex.org/W2114713190","https://openalex.org/W2115190007","https://openalex.org/W2118910836","https://openalex.org/W2127640118","https://openalex.org/W2128969076","https://openalex.org/W2132432001","https://openalex.org/W2133147430","https://openalex.org/W2137176543","https://openalex.org/W2140604686","https://openalex.org/W2142055410","https://openalex.org/W2148298128","https://openalex.org/W2151385152","https://openalex.org/W2153392439","https://openalex.org/W2153936388","https://openalex.org/W2154431984","https://openalex.org/W2155592392","https://openalex.org/W2916408032","https://openalex.org/W4206724286","https://openalex.org/W4210430020","https://openalex.org/W7097764011","https://openalex.org/W7098320409"],"related_works":["https://openalex.org/W2137176543","https://openalex.org/W2949964135","https://openalex.org/W3015672303","https://openalex.org/W2994524521","https://openalex.org/W7100081585","https://openalex.org/W2149640650","https://openalex.org/W2159868271","https://openalex.org/W2048512322","https://openalex.org/W4375955900","https://openalex.org/W6885064848"],"abstract_inverted_index":{"BACKGROUND:":[0],"Increasing":[1],"amount":[2],"of":[3,20,24,39,60,88,96,113,183,210,216],"data":[4,16,137],"from":[5],"comparative":[6],"genomics,":[7],"and":[8,51,67,124,146,154,192],"newly":[9],"developed":[10,200],"technologies":[11],"producing":[12],"accurate":[13],"gene":[14],"expression":[15,22,37,155,217],"facilitate":[17],"the":[18,21,36,94,101,111,120,129,167,181,190,207,214],"study":[19,151,215],"divergence":[23,38],"homologous":[25,72,89,97,160,169,184,211],"genes.":[26],"Previous":[27],"studies":[28],"have":[29,199],"individually":[30],"highlighted":[31],"factors":[32,66],"that":[33,91],"contribute":[34],"to":[35,63,127,150,165,179],"duplicate":[40],"genes,":[41,212],"e.g.":[42],"promoter":[43,107],"changes,":[44,123],"exon":[45,116],"structure":[46,117,122],"heterogeneity,":[47],"asymmetric":[48],"histone":[49],"modifications":[50],"genomic":[52,125],"neighborhood":[53,126],"conservation.":[54],"However,":[55],"there":[56],"is":[57],"a":[58,61,75,133,201],"lack":[59],"tool":[62,84,203],"integrate":[64],"multiple":[65],"visualize":[68,180],"their":[69],"variety":[70],"among":[71],"genes":[73,98,185],"in":[74,93,103,132,206],"straightforward":[76],"way.":[77],"RESULTS:":[78],"We":[79,171,198],"introduce":[80],"Translog":[81],"(a":[82],"web-based":[83,202],"for":[85,109,118,138,143,204],"Transcriptome":[86],"comparison":[87,95,209],"genes)":[90],"assists":[92],"by":[99],"displaying":[100,119],"loci":[102,161],"three":[104],"different":[105],"views:":[106],"view":[108],"studying":[110],"sharing/turnover":[112],"transcription":[114,139,152],"initiations,":[115],"exon-intron":[121],"show":[128],"macro-synteny":[130],"conservation":[131],"larger":[134],"scale.":[135],"CAGE":[136],"initiation":[140],"are":[141],"mapped":[142],"each":[144],"transcript":[145],"can":[147,162,176],"be":[148,163,177],"used":[149,164,178],"turnover":[153],"changes.":[156],"Alignment":[157],"anchors":[158],"between":[159],"define":[166],"precise":[168],"transcripts.":[170],"demonstrate":[172],"how":[173],"these":[174],"views":[175],"changes":[182],"during":[186],"evolution,":[187],"particularly":[188],"after":[189],"2R":[191],"3R":[193],"whole":[194],"genome":[195],"duplication.":[196],"CONCLUSION:":[197],"assisting":[205],"transcriptome":[208],"facilitating":[213],"divergence.":[218]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}