{"id":"https://openalex.org/W1964484358","doi":"https://doi.org/10.1086/505076","title":"Lack of Association between the Nasopharyngeal Carriage ofStreptococcuspneumoniaeandStaphylococcusaureusin HIV\u20101\u2013Infected South African Children","display_name":"Lack of Association between the Nasopharyngeal Carriage ofStreptococcuspneumoniaeandStaphylococcusaureusin HIV\u20101\u2013Infected South African Children","publication_year":2006,"publication_date":"2006-07-05","ids":{"openalex":"https://openalex.org/W1964484358","doi":"https://doi.org/10.1086/505076","mag":"1964484358","pmid":"https://pubmed.ncbi.nlm.nih.gov/16826488"},"language":"en","primary_location":{"id":"doi:10.1086/505076","doi":"https://doi.org/10.1086/505076","is_oa":false,"landing_page_url":"https://doi.org/10.1086/505076","pdf_url":null,"source":{"id":"https://openalex.org/S54542293","display_name":"The Journal of Infectious Diseases","issn_l":"0022-1899","issn":["0022-1899","1537-6613"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Infectious Diseases","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103482999","display_name":"Lisa\u00a0M. McNally","orcid":"https://orcid.org/0009-0005-6769-5825","observed_orcids":["https://orcid.org/0009-0005-6769-5825"]},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lisa\u00a0M. McNally","raw_affiliation_strings":["Centre for International Child Health, Institute of Child Health, University College, London, United Kingdom. lisa.m.mc-nally@gskbio.com","Centre for International Child Health and","Paediatrics and Child Health,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for International Child Health, Institute of Child Health, University College, London, United Kingdom. lisa.m.mc-nally@gskbio.com","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"Centre for International Child Health and","institution_ids":[]},{"raw_affiliation_string":"Paediatrics and Child Health,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083327866","display_name":"Prakash Mohan Jeena","orcid":"https://orcid.org/0000-0001-9244-6285","observed_orcids":["https://orcid.org/0000-0001-9244-6285"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Prakash\u00a0M. Jeena","raw_affiliation_strings":["Paediatrics and Child Health,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Paediatrics and Child Health,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045617652","display_name":"Kavitha Gajee","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kavitha Gajee","raw_affiliation_strings":["Medical Microbiology, and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Microbiology, and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110270101","display_name":"A. Willem Sturm","orcid":"https://orcid.org/0000-0001-7521-8248","observed_orcids":["https://orcid.org/0000-0001-7521-8248"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"A.\u00a0Willem Sturm","raw_affiliation_strings":["Medical Microbiology, and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Microbiology, and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033728236","display_name":"Andrew M Tomkins","orcid":"https://orcid.org/0000-0002-4009-1459","observed_orcids":["https://orcid.org/0000-0002-4009-1459"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andrew\u00a0M. Tomkins","raw_affiliation_strings":["Centre for International Child Health and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for International Child Health and","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088400921","display_name":"Hoosen Mahomed Coovadia","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I95023434","display_name":"University of KwaZulu-Natal","ror":"https://ror.org/04qzfn040","country_code":"ZA","type":"education","lineage":["https://openalex.org/I95023434"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Hoosen\u00a0M. Coovadia","raw_affiliation_strings":["Doris Duke Medical Research Institute, Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Doris Duke Medical Research Institute, Nelson R. Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa","institution_ids":["https://openalex.org/I95023434"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100340815","display_name":"David Goldblatt","orcid":"https://orcid.org/0000-0002-0769-5242","observed_orcids":["https://orcid.org/0000-0002-0769-5242"]},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Goldblatt","raw_affiliation_strings":["Immunobiology Unit, Institute of Child Health, University College, London, United Kingdom; Departments of","Departments of","Immunobiology Unit, Institute of Child Health, University College, London, United Kingdom"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Immunobiology Unit, Institute of Child Health, University College, London, United Kingdom; Departments of","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"Departments of","institution_ids":[]},{"raw_affiliation_string":"Immunobiology Unit, Institute of Child Health, University College, London, United Kingdom","institution_ids":["https://openalex.org/I45129253"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4763,"currency":"USD","value_usd":4763},"apc_paid":null,"fwci":3.7462,"has_fulltext":true,"cited_by_count":85,"citation_normalized_percentile":{"value":0.92984234,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"194","issue":"3","first_page":"385","last_page":"390"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10654","display_name":"Pneumonia and Respiratory Infections","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10654","display_name":"Pneumonia and Respiratory Infections","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10082","display_name":"HIV/AIDS Research and Interventions","score":0.002899999963119626,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11153","display_name":"Streptococcal Infections and Treatments","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/streptococcus-pneumoniae","display_name":"Streptococcus pneumoniae","score":0.9789999723434448},{"id":"https://openalex.org/keywords/staphylococcus-aureus","display_name":"Staphylococcus aureus","score":1.0},{"id":"https://openalex.org/keywords/hiv-1-infection","display_name":"HIV-1 infection","score":0.8650000095367432},{"id":"https://openalex.org/keywords/nasopharyngeal-carriage","display_name":"nasopharyngeal carriage","score":0.9660000205039978},{"id":"https://openalex.org/keywords/severe-pneumonia","display_name":"severe pneumonia","score":0.7160000205039978},{"id":"https://openalex.org/keywords/childhood-pneumonia","display_name":"pediatric pneumonia","score":0.628000020980835},{"id":"https://openalex.org/keywords/coinfection","display_name":"co-infection","score":0.5929999947547913},{"id":"https://openalex.org/keywords/south-african-children","display_name":"South African children","score":0.6290000081062317}],"concepts":[{"id":"https://openalex.org/C2781253189","wikidata":"https://www.wikidata.org/wiki/Q221179","display_name":"Streptococcus pneumoniae","level":3,"score":0.8116046190261841},{"id":"https://openalex.org/C2779489039","wikidata":"https://www.wikidata.org/wiki/Q188121","display_name":"Staphylococcus aureus","level":3,"score":0.7405045628547668},{"id":"https://openalex.org/C32762888","wikidata":"https://www.wikidata.org/wiki/Q235356","display_name":"Carriage","level":2,"score":0.669310986995697},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.6292492151260376},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.5564628839492798},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.44704487919807434},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4008183181285858},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.33271151781082153},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3269997239112854},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.23885071277618408},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.14746081829071045},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07903188467025757},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06112697720527649}],"mesh":[{"descriptor_ui":"D002675","descriptor_name":"Child, Preschool","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007223","descriptor_name":"Infant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007231","descriptor_name":"Infant, Newborn","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009305","descriptor_name":"Nasopharynx","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D013019","descriptor_name":"South Africa","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D013296","descriptor_name":"Streptococcus pneumoniae","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013296","descriptor_name":"Streptococcus pneumoniae","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":true},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D018410","descriptor_name":"Pneumonia, Bacterial","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":true},{"descriptor_ui":"D018410","descriptor_name":"Pneumonia, Bacterial","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1086/505076","doi":"https://doi.org/10.1086/505076","is_oa":false,"landing_page_url":"https://doi.org/10.1086/505076","pdf_url":null,"source":{"id":"https://openalex.org/S54542293","display_name":"The Journal of Infectious Diseases","issn_l":"0022-1899","issn":["0022-1899","1537-6613"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of Infectious Diseases","raw_type":"journal-article"},{"id":"pmid:16826488","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16826488","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Journal of infectious diseases","raw_type":"Journal Article"},{"id":"pmh:oai:dial.uclouvain.be:boreal:59990","doi":null,"is_oa":false,"landing_page_url":"http://hdl.handle.net/2078.1/59990","pdf_url":null,"source":{"id":"https://openalex.org/S4306400166","display_name":"Digital Access to Libraries","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2800384882","host_organization_name":"Harris County Public Library","host_organization_lineage":["https://openalex.org/I2800384882"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"The Journal of Infectious Diseases, Vol. 194, no. 3, p. 385-390 (2006)","raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:176424","doi":null,"is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/176424/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"JOURNAL OF INFECTIOUS DISEASES , 194 (3) 385 - 390. (2006)","raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":1.0}],"study_designs":[{"id":"https://openalex.org/study-designs/observational-study","display_name":"Observational Study"}],"awards":[{"id":"https://openalex.org/G8984089100","display_name":null,"funder_award_id":"GR056609MA","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320322812","display_name":"Inyuvesi Yakwazulu-Natali","ror":"https://ror.org/04qzfn040"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1964035421","https://openalex.org/W1996050708","https://openalex.org/W1998894179","https://openalex.org/W2010943475","https://openalex.org/W2013499306","https://openalex.org/W2021148491","https://openalex.org/W2025453303","https://openalex.org/W2036086447","https://openalex.org/W2083289238","https://openalex.org/W2084651763","https://openalex.org/W2098698934","https://openalex.org/W2127090093","https://openalex.org/W2148212653","https://openalex.org/W2159938190","https://openalex.org/W4236055423"],"related_works":["https://openalex.org/W2061126684","https://openalex.org/W2157971066","https://openalex.org/W2146575747","https://openalex.org/W4385891933","https://openalex.org/W1971125842","https://openalex.org/W2091951702","https://openalex.org/W2081462483","https://openalex.org/W2091850317","https://openalex.org/W2011088885","https://openalex.org/W2009372149"],"abstract_inverted_index":{"We":[0,124],"investigated":[1],"the":[2,19,67,81,92,99,106,118],"nasopharyngeal":[3],"carriage":[4,46,64,79,104,137],"of":[5,61,76,101],"Streptococcus":[6],"pneumoniae":[7,45,84,109,133],"and":[8,39,134],"Staphylococcus":[9],"aureus":[10,63,78,103,136],"in":[11,80,91,105,117,138],"355":[12],"children":[13,55,69,141],"hospitalized":[14,140],"with":[15,142],"severe":[16,143],"pneumonia.":[17,144],"Of":[18],"children,":[20],"239":[21],"(67.3%)":[22],"were":[23],"human":[24],"immunodeficiency":[25],"virus":[26],"(HIV)-1":[27],"positive;":[28],"169":[29],"(47.6%)":[30],"carried":[31,36,42],"S.":[32,37,44,62,77,83,102,108,132,135],"pneumoniae,":[33],"91":[34],"(25.6%)":[35],"aureus,":[38],"33":[40],"(9.3%)":[41],"both.":[43],"was":[47,86,111],"not":[48,112,126],"related":[49],"to":[50],"HIV-1":[51],"status.":[52],"The":[53,74],"HIV-1-positive":[54,107,139],"had":[56],"a":[57,128],"significantly":[58,87,113],"higher":[59],"rate":[60,75,100],"than":[65,89,115],"did":[66,125],"HIV-1-negative":[68,82],"(31.4%":[70],"vs.":[71,95,121],"13.8%;":[72],"P<.001).":[73],"carriers":[85,110],"lower":[88,114],"that":[90,116],"noncarriers":[93,119],"(5.5%":[94],"21.3%;":[96],"P=.013),":[97],"but":[98],"(26.3%":[120],"36.0%;":[122],"P=.11).":[123],"find":[127],"negative":[129],"association":[130],"between":[131]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":10}],"updated_date":"2026-11-10T11:39:43.021295","created_date":"2016-06-24T00:00:00"}