{"id":"https://openalex.org/W1946914101","doi":"https://doi.org/10.1002/pmic.201500091","title":"A peptide resource for the analysis of Staphylococcus aureus in host\u2013pathogen interaction studies","display_name":"A peptide resource for the analysis of Staphylococcus aureus in host\u2013pathogen interaction studies","publication_year":2015,"publication_date":"2015-07-30","ids":{"openalex":"https://openalex.org/W1946914101","doi":"https://doi.org/10.1002/pmic.201500091","mag":"1946914101","pmid":"https://pubmed.ncbi.nlm.nih.gov/26224020"},"language":"en","primary_location":{"id":"doi:10.1002/pmic.201500091","doi":"https://doi.org/10.1002/pmic.201500091","is_oa":false,"landing_page_url":"https://doi.org/10.1002/pmic.201500091","pdf_url":null,"source":{"id":"https://openalex.org/S182655450","display_name":"PROTEOMICS","issn_l":"1615-9853","issn":["1615-9853","1615-9861"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PROTEOMICS","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4886865","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015476234","display_name":"Maren Depke","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Maren Depke","raw_affiliation_strings":["ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Contributed equally to this work","ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Contributed equally to this work","institution_ids":[]},{"raw_affiliation_string":"ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085641552","display_name":"Stephan Michalik","orcid":"https://orcid.org/0000-0002-6550-0132","observed_orcids":["https://orcid.org/0000-0002-6550-0132"]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stephan Michalik","raw_affiliation_strings":["ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Contributed equally to this work","ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Contributed equally to this work","institution_ids":[]},{"raw_affiliation_string":"ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026253479","display_name":"Alexander Rabe","orcid":"https://orcid.org/0000-0003-4045-4026","observed_orcids":["https://orcid.org/0000-0003-4045-4026"]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Rabe","raw_affiliation_strings":["ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073207947","display_name":"Kristin Surmann","orcid":"https://orcid.org/0009-0009-7305-3457","observed_orcids":["https://orcid.org/0009-0009-7305-3457"]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Kristin Surmann","raw_affiliation_strings":["Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023785826","display_name":"Lars Brinkmann","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lars Brinkmann","raw_affiliation_strings":["Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018412626","display_name":"Nico Jehmlich","orcid":"https://orcid.org/0000-0002-5638-6868","observed_orcids":["https://orcid.org/0000-0002-5638-6868"]},"institutions":[{"id":"https://openalex.org/I137479271","display_name":"Helmholtz Centre for Environmental Research","ror":"https://ror.org/000h6jb29","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I137479271"]},{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Nico Jehmlich","raw_affiliation_strings":["Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Current address: Dr. Nico Jehmlich, Helmholtz-Centre for Environmental Research-UFZ, Department of Proteomics, Leipzig, Germany","Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Current address: Dr. Nico Jehmlich, Helmholtz-Centre for Environmental Research-UFZ, Department of Proteomics, Leipzig, Germany","institution_ids":["https://openalex.org/I137479271"]},{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065069084","display_name":"J\u00f6rg Bernhardt","orcid":"https://orcid.org/0000-0001-8410-5624","observed_orcids":["https://orcid.org/0000-0001-8410-5624"]},"institutions":[{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"J\u00f6rg Bernhardt","raw_affiliation_strings":["Institute for Microbiology Ernst\u2010Moritz\u2010Arndt\u2010University Greifswald  Greifswald Germany","Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Microbiology Ernst\u2010Moritz\u2010Arndt\u2010University Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I36522303"]},{"raw_affiliation_string":"Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111937051","display_name":"Michael Hecker","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Hecker","raw_affiliation_strings":["Institute for Microbiology Ernst\u2010Moritz\u2010Arndt\u2010University Greifswald  Greifswald Germany","Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Microbiology Ernst\u2010Moritz\u2010Arndt\u2010University Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I36522303"]},{"raw_affiliation_string":"Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I36522303"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070272273","display_name":"Bernd Wollscheid","orcid":"https://orcid.org/0000-0002-3923-1610","observed_orcids":["https://orcid.org/0000-0002-3923-1610"]},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4405255907","display_name":"Institute for Molecular Systems Biology","ror":"https://ror.org/03j5gm982","country_code":"CH","type":"facility","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4405255907"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bernd Wollscheid","raw_affiliation_strings":["Institute of Molecular Systems Biology ETH Zurich  Zurich Switzerland","Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular Systems Biology ETH Zurich  Zurich Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405255907"]},{"raw_affiliation_string":"Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4405255907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080826559","display_name":"Zhi Sun","orcid":"https://orcid.org/0000-0003-3324-6851","observed_orcids":["https://orcid.org/0000-0003-3324-6851"]},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhi Sun","raw_affiliation_strings":["Institute for Systems Biology (ISB)  Seattle WA USA","Institute for Systems Biology (ISB), Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology (ISB)  Seattle WA USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology (ISB), Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036737482","display_name":"Robert L. Moritz","orcid":"https://orcid.org/0000-0002-3216-9447","observed_orcids":["https://orcid.org/0000-0002-3216-9447"]},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert L. Moritz","raw_affiliation_strings":["Institute for Systems Biology (ISB)  Seattle WA USA","Institute for Systems Biology (ISB), Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology (ISB)  Seattle WA USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology (ISB), Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085667735","display_name":"Uwe V\u00f6lker","orcid":"https://orcid.org/0000-0002-5689-3448","observed_orcids":["https://orcid.org/0000-0002-5689-3448"]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Uwe V\u00f6lker","raw_affiliation_strings":["Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045874625","display_name":"Frank Schmidt","orcid":"https://orcid.org/0000-0001-5406-3988","observed_orcids":["https://orcid.org/0000-0001-5406-3988"]},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2799318839"]},{"id":"https://openalex.org/I36522303","display_name":"Universit\u00e4t Greifswald","ror":"https://ror.org/00r1edq15","country_code":"DE","type":"education","lineage":["https://openalex.org/I36522303"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Frank Schmidt","raw_affiliation_strings":["ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ZIK\u2010FunGene Junior Research Group \u201cApplied Proteomics\u201d Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics University Medicine Greifswald  Greifswald Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]},{"raw_affiliation_string":"ZIK-FunGene Junior Research Group \"Applied Proteomics\", Interfaculty Institute for Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5045874625"],"corresponding_institution_ids":["https://openalex.org/I2799318839","https://openalex.org/I36522303"],"apc_list":{"value":4650,"currency":"USD","value_usd":4650},"apc_paid":null,"fwci":1.4141,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.77056953,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"15","issue":"21","first_page":"3648","last_page":"3661"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/staphylococcus-aureus","display_name":"Staphylococcus aureus","score":0.9610000252723694},{"id":"https://openalex.org/keywords/spectral-library","display_name":"spectral library","score":0.5649999976158142},{"id":"https://openalex.org/keywords/host-pathogen-interaction","display_name":"host-pathogen interaction","score":0.8410000205039978},{"id":"https://openalex.org/keywords/bacterial-proteome","display_name":"bacterial proteome","score":0.8519999980926514},{"id":"https://openalex.org/keywords/peptide-identification","display_name":"peptide identification","score":0.6729999780654907},{"id":"https://openalex.org/keywords/srm","display_name":"SRM","score":0.4869999885559082},{"id":"https://openalex.org/keywords/data-independent-acquisition","display_name":"data-independent acquisition","score":0.8149999976158142}],"concepts":[{"id":"https://openalex.org/C2779489039","wikidata":"https://www.wikidata.org/wiki/Q188121","display_name":"Staphylococcus aureus","level":3,"score":0.7802992463111877},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.7474377751350403},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.691548228263855},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.6582121849060059},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4812331199645996},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.4365174174308777},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.42708075046539307},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.343355268239975},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.2677761912345886},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1503530740737915},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.11029842495918274},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.09899207949638367},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08753010630607605},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001980","descriptor_name":"Bronchi","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D013203","descriptor_name":"Staphylococcal Infections","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D013211","descriptor_name":"Staphylococcus aureus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1002/pmic.201500091","doi":"https://doi.org/10.1002/pmic.201500091","is_oa":false,"landing_page_url":"https://doi.org/10.1002/pmic.201500091","pdf_url":null,"source":{"id":"https://openalex.org/S182655450","display_name":"PROTEOMICS","issn_l":"1615-9853","issn":["1615-9853","1615-9861"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","dongbi-c","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"PROTEOMICS","raw_type":"journal-article"},{"id":"pmid:26224020","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26224020","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proteomics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4886865","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4886865","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proteomics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:4886865","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4886865","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proteomics","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.5683000087738037}],"sustainable_development_goals_aurora":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.4399999976158142}],"study_designs":[],"awards":[{"id":"https://openalex.org/G1371608312","display_name":null,"funder_award_id":"R01 GM087221","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G1487637710","display_name":null,"funder_award_id":"2P50GM076547","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G1722321765","display_name":null,"funder_award_id":"S10RR027584","funder_id":"https://openalex.org/F4320337375","funder_display_name":"National Center for Research Resources"},{"id":"https://openalex.org/G2073473589","display_name":null,"funder_award_id":"P50GM076547","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2204463108","display_name":"Complete Human Peptide- and MRM-Atlas","funder_award_id":"RC2HG005805","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G2833807032","display_name":null,"funder_award_id":"R01 GM087221","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G895435161","display_name":null,"funder_award_id":"S10 RR027584","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W1525575010","https://openalex.org/W1561156529","https://openalex.org/W1923384484","https://openalex.org/W1965904642","https://openalex.org/W1981593008","https://openalex.org/W1989784325","https://openalex.org/W1990137485","https://openalex.org/W1996340440","https://openalex.org/W1998295756","https://openalex.org/W2002319824","https://openalex.org/W2005838473","https://openalex.org/W2007930848","https://openalex.org/W2014525284","https://openalex.org/W2023010129","https://openalex.org/W2025177545","https://openalex.org/W2034910531","https://openalex.org/W2035003769","https://openalex.org/W2036995295","https://openalex.org/W2039290168","https://openalex.org/W2050564597","https://openalex.org/W2053943711","https://openalex.org/W2056499061","https://openalex.org/W2061768348","https://openalex.org/W2069860553","https://openalex.org/W2070012042","https://openalex.org/W2073637473","https://openalex.org/W2074956188","https://openalex.org/W2079843936","https://openalex.org/W2098533519","https://openalex.org/W2103345380","https://openalex.org/W2104471465","https://openalex.org/W2109867978","https://openalex.org/W2111113492","https://openalex.org/W2116160897","https://openalex.org/W2120664505","https://openalex.org/W2125375689","https://openalex.org/W2125510288","https://openalex.org/W2129754968","https://openalex.org/W2135621733","https://openalex.org/W2135673226","https://openalex.org/W2148289888","https://openalex.org/W2148432790","https://openalex.org/W2148490163","https://openalex.org/W2150865677","https://openalex.org/W2151624979","https://openalex.org/W2155553629","https://openalex.org/W2157918066","https://openalex.org/W2160717298","https://openalex.org/W2162663134","https://openalex.org/W2166155069","https://openalex.org/W2171348023","https://openalex.org/W2171998389","https://openalex.org/W3120676751"],"related_works":["https://openalex.org/W2331760418","https://openalex.org/W4281790352","https://openalex.org/W4243501567","https://openalex.org/W276237299","https://openalex.org/W2384305430","https://openalex.org/W2342726987","https://openalex.org/W2091398531","https://openalex.org/W2343234619","https://openalex.org/W3173815060","https://openalex.org/W4286497165"],"abstract_inverted_index":{"Staphylococcus":[0],"aureus":[1,60,78,154],"is":[2],"an":[3,52,190],"opportunistic":[4],"human":[5],"pathogen,":[6],"which":[7,81,146],"can":[8,17],"cause":[9],"life-threatening":[10],"disease.":[11],"Proteome":[12],"analyses":[13],"of":[14,27,35,42,56,85,107,112,136,151,167],"the":[15,33,40,57,86,103,149,165,209],"bacterium":[16],"provide":[18],"new":[19],"insights":[20],"into":[21,125],"its":[22],"pathophysiology":[23],"and":[24,96,132],"important":[25,191],"facets":[26],"metabolic":[28],"adaptation":[29],"and,":[30],"thus,":[31],"aid":[32],"recognition":[34],"targets":[36],"for":[37,83,134,194,197],"intervention.":[38],"However,":[39],"value":[41],"such":[43],"proteome":[44,179],"studies":[45,176],"increases":[46],"with":[47,211],"their":[48],"comprehensiveness.":[49],"We":[50],"present":[51],"MS-driven,":[53],"proteome-wide":[54],"characterization":[55],"strain":[58],"S.":[59,77,137,153,172,182],"HG001.":[61],"Combining":[62],"144":[63],"high":[64,118],"precision":[65],"proteomic":[66],"data":[67,204],"sets,":[68],"we":[69],"identified":[70,152],"19":[71],"109":[72,110],"peptides":[73,139],"from":[74],"2088":[75],"distinct":[76],"HG001":[79],"proteins,":[80],"account":[82],"72%":[84],"predicted":[87],"ORFs.":[88],"Peptides":[89],"were":[90],"further":[91],"characterized":[92],"concerning":[93],"pI,":[94],"GRAVY,":[95],"detectability":[97],"scores":[98],"in":[99,140,171,208],"order":[100],"to":[101,157],"understand":[102],"low":[104],"peptide":[105,128],"coverage":[106],"8.7%":[108],"(19":[109],"out":[111],"220":[113],"245":[114],"theoretical":[115],"peptides).":[116],"The":[117,181],"quality":[119],"peptide-centric":[120],"spectra":[121,184],"have":[122,205],"been":[123,206],"organized":[124],"a":[126,158],"comprehensive":[127,178],"fragmentation":[129],"library":[130],"(SpectraST)":[131],"used":[133],"identification":[135],"aureus-typic":[138],"highly":[141],"complex":[142],"host-pathogen":[143,174],"interaction":[144,175],"experiments,":[145],"significantly":[147],"improved":[148],"number":[150],"proteins":[155],"compared":[156],"MASCOT":[159],"search.":[160],"This":[161],"effort":[162],"now":[163],"allows":[164],"elucidation":[166],"crucial":[168],"pathophysiological":[169],"questions":[170],"aureus-specific":[173,183],"through":[177],"analysis.":[180],"resource":[185],"developed":[186],"here":[187],"also":[188],"represents":[189],"spectral":[192],"repository":[193],"SRM":[195],"or":[196],"data-independent":[198],"acquisition":[199],"MS":[200,203],"approaches.":[201],"All":[202],"deposited":[207],"ProteomeXchange":[210],"identifier":[212],"PXD000702":[213],"(http://proteomecentral.proteomexchange.org/dataset/PXD000702).":[214]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4}],"updated_date":"2026-10-16T09:59:22.235173","created_date":"2016-06-24T00:00:00"}