{"id":"https://openalex.org/W1914799375","doi":null,"title":"Bayesian estimation for quantification by real-time Polymerase Chain Reaction","display_name":"Bayesian estimation for quantification by real-time Polymerase Chain Reaction","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1914799375","mag":"1914799375"},"language":"en","primary_location":{"id":"pmh:601644","doi":null,"is_oa":false,"landing_page_url":"http://library.tue.nl/csp/dare/LinkToRepository.csp?recordnumber=601644","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"External research report"},"volume":null,"type":"report","is_traditional":false,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://research.tue.nl/nl/publications/447ecced-e95e-45ff-b8a6-d65d6e5e5e9f","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109908418","display_name":"NL Lalam","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I83019370","display_name":"Eindhoven University of Technology","ror":"https://ror.org/02c2kyt77","country_code":"NL","type":"education","lineage":["https://openalex.org/I83019370"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"NL Lalam","raw_affiliation_strings":["EINDHOVEN UNIVERSITY OF TECHNOLOGY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"EINDHOVEN UNIVERSITY OF TECHNOLOGY","institution_ids":["https://openalex.org/I83019370"]}]},{"author_position":"last","author":{"id":null,"display_name":"Christophe Jacob","orcid":"https://orcid.org/0000-0001-8522-2865","observed_orcids":["https://orcid.org/0000-0001-8522-2865"]},"institutions":[{"id":"https://openalex.org/I4387154544","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83","country_code":"FR","type":"funder","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4387154544"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christophe Jacob","raw_affiliation_strings":["Institut national de la recherche agronomique"],"raw_orcid":"https://orcid.org/0000-0001-8522-2865","affiliations":[{"raw_affiliation_string":"Institut national de la recherche agronomique","institution_ids":["https://openalex.org/I4387154544"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2005041","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12056","display_name":"Markov Chains and Monte Carlo Methods","score":0.9208999872207642,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12056","display_name":"Markov Chains and Monte Carlo Methods","score":0.9208999872207642,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10243","display_name":"Statistical Methods and Bayesian Inference","score":0.03310000151395798,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.02239999920129776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/real-time-pcr","display_name":"real-time PCR","score":0.6880000233650208},{"id":"https://openalex.org/keywords/bayesian-estimation","display_name":"Bayesian estimation","score":0.9369999766349792},{"id":"https://openalex.org/keywords/replication-efficiency","display_name":"replication efficiency","score":0.7110000252723694},{"id":"https://openalex.org/keywords/markov-chain-monte-carlo","display_name":"Markov chain Monte Carlo","score":0.8429999947547913},{"id":"https://openalex.org/keywords/nucleic-acid-quantification","display_name":"nucleic acid quantification","score":0.7269999980926514}],"concepts":[{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.6591624021530151},{"id":"https://openalex.org/C185429906","wikidata":"https://www.wikidata.org/wiki/Q1130160","display_name":"Estimator","level":2,"score":0.5737266540527344},{"id":"https://openalex.org/C111350023","wikidata":"https://www.wikidata.org/wiki/Q1191869","display_name":"Markov chain Monte Carlo","level":3,"score":0.5355351567268372},{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.5319806337356567},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.46314239501953125},{"id":"https://openalex.org/C68022304","wikidata":"https://www.wikidata.org/wiki/Q842217","display_name":"Bayes estimator","level":3,"score":0.43255066871643066},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.42685556411743164},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.4211786389350891},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36082130670547485},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3371272385120392},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32213062047958374},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23763760924339294}],"mesh":[],"locations_count":5,"locations":[{"id":"pmh:601644","doi":null,"is_oa":false,"landing_page_url":"http://library.tue.nl/csp/dare/LinkToRepository.csp?recordnumber=601644","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"External research report"},{"id":"pmh:oai:library.tue.nl:601644","doi":null,"is_oa":false,"landing_page_url":"http://repository.tue.nl/601644","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"External research report"},{"id":"pmh:tue:oai:library.tue.nl:601644","doi":null,"is_oa":false,"landing_page_url":"http://repository.tue.nl/601644","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/report"},{"id":"pmh:tue:oai:pure.tue.nl:publications/447ecced-e95e-45ff-b8a6-d65d6e5e5e9f","doi":null,"is_oa":true,"landing_page_url":"https://research.tue.nl/nl/publications/447ecced-e95e-45ff-b8a6-d65d6e5e5e9f","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/report"},{"id":"mag:1914799375","doi":null,"is_oa":false,"landing_page_url":"https://pure.tue.nl/ws/files/3292917/601644.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306525755","display_name":"Report Eurandom","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Report Eurandom","raw_type":null}],"best_oa_location":{"id":"pmh:tue:oai:pure.tue.nl:publications/447ecced-e95e-45ff-b8a6-d65d6e5e5e9f","doi":null,"is_oa":true,"landing_page_url":"https://research.tue.nl/nl/publications/447ecced-e95e-45ff-b8a6-d65d6e5e5e9f","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/report"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1482694776","https://openalex.org/W1501289238","https://openalex.org/W1984872787","https://openalex.org/W1991002805","https://openalex.org/W1996430610","https://openalex.org/W2004803703","https://openalex.org/W2019766856","https://openalex.org/W2024315245","https://openalex.org/W2036758357","https://openalex.org/W2049882758","https://openalex.org/W2050717506","https://openalex.org/W2051840225","https://openalex.org/W2054560624","https://openalex.org/W2061881593","https://openalex.org/W2065024011","https://openalex.org/W2119211329","https://openalex.org/W2123247959","https://openalex.org/W2130416410","https://openalex.org/W2139563079","https://openalex.org/W2144644885","https://openalex.org/W2158274955"],"related_works":["https://openalex.org/W1974772936","https://openalex.org/W147172029","https://openalex.org/W2040464606","https://openalex.org/W7101068057","https://openalex.org/W2038779658","https://openalex.org/W2895498807","https://openalex.org/W2127145777","https://openalex.org/W7096806427","https://openalex.org/W2170709876","https://openalex.org/W1970247563"],"abstract_inverted_index":{"The":[0,90],"aim":[1],"of":[2,15,23,42,44,86,113,115],"the":[3,11,24,27,39,45,49,71,87,103,116],"Quantitative":[4],"Polymerase":[5],"Chain":[6,120],"Reaction":[7],"is":[8],"to":[9,69,95],"determine":[10],"initial":[12],"amount":[13],"X0":[14],"specific":[16],"nucleic":[17],"acids":[18],"from":[19],"an":[20],"observed":[21],"trajectory":[22],"amplification":[25,28,88],"process,":[26],"being":[29,48],"achieved":[30],"through":[31],"successive":[32],"replication":[33,43,57],"cycles.":[34],"This":[35],"process":[36],"depends":[37],"on":[38,102],"efficiency":[40],"{pn}n":[41],"molecules,":[46],"pn":[47,61],"probability":[50],"that":[51],"a":[52,78,82],"molecule":[53],"will":[54],"duplicate":[55],"at":[56],"cycle":[58],"n.":[59],"Assuming":[60],"=":[62,75],"p":[63],"for":[64],"all":[65],"n,":[66],"we":[67],"propose":[68],"estimate":[70],"unknown":[72],"parameter":[73,117],"\u03b8":[74],"(p,X0)":[76],"in":[77],"Bayesian":[79,91,109],"framework":[80],"under":[81],"Bienayme-Galton-Watson":[83],"branching":[84],"model":[85],"process.":[89],"approach":[92],"allows":[93],"us":[94],"take":[96],"into":[97],"account":[98],"some":[99],"prior":[100],"information":[101],"parameter.":[104],"We":[105],"build":[106],"and":[107,111],"study":[108],"estimators":[110],"sets":[112],"credibility":[114],"by":[118],"Markov":[119],"Monte":[121],"Carlo":[122],"methods.":[123]},"counts_by_year":[],"updated_date":"2026-10-16T09:59:22.235173","created_date":"2016-06-24T00:00:00"}
