{"id":"https://openalex.org/W18918057","doi":null,"title":"Evidence for Viral Infection in the Copepods Labidocera aestiva and Acartia tonsa in Tampa Bay, Florida","display_name":"Evidence for Viral Infection in the Copepods Labidocera aestiva and Acartia tonsa in Tampa Bay, Florida","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W18918057","mag":"18918057"},"language":"en","primary_location":{"id":"pmh:oai:digitalcommons.usf.edu:etd-5228","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.usf.edu/etd/4032","pdf_url":"https://digitalcommons.usf.edu/cgi/viewcontent.cgi?article=5228&context=etd","source":{"id":"https://openalex.org/S4377196272","display_name":"Digital Commons - University of South Florida (University of South Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2613432","host_organization_name":"University of South Florida","host_organization_lineage":["https://openalex.org/I2613432"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"USF Tampa Graduate Theses and Dissertations","raw_type":"thesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://digitalcommons.usf.edu/cgi/viewcontent.cgi?article=5228&context=etd","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029832216","display_name":"Darren S. Dunlap","orcid":"https://orcid.org/0000-0001-5595-6817","observed_orcids":["https://orcid.org/0000-0001-5595-6817"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Darren S. Dunlap","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-5595-6817","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5029832216"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.454800009727478,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.454800009727478,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10506","display_name":"Aquaculture disease management and microbiota","score":0.4259999990463257,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10815","display_name":"Parasite Biology and Host Interactions","score":0.02239999920129776,"subfield":{"id":"https://openalex.org/subfields/2405","display_name":"Parasitology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/circovirus","display_name":"circovirus","score":0.8130000233650208},{"id":"https://openalex.org/keywords/acartia-tonsa","display_name":"Acartia tonsa","score":0.9120000004768372},{"id":"https://openalex.org/keywords/calanoida","display_name":"Calanoida","score":0.824999988079071},{"id":"https://openalex.org/keywords/mesozooplankton","display_name":"mesozooplankton","score":0.9190000295639038},{"id":"https://openalex.org/keywords/circoviridae","display_name":"Circoviridae","score":0.8230000138282776},{"id":"https://openalex.org/keywords/viral-metagenomics","display_name":"viral metagenomics","score":0.8600000143051147},{"id":"https://openalex.org/keywords/viral-load","display_name":"viral load","score":0.6179999709129333},{"id":"https://openalex.org/keywords/viral-replication","display_name":"viral replication","score":0.7229999899864197},{"id":"https://openalex.org/keywords/virus-like-particles","display_name":"virus-like particles","score":0.6539999842643738},{"id":"https://openalex.org/keywords/tampa-bay","display_name":"Tampa Bay","score":0.6539999842643738}],"concepts":[{"id":"https://openalex.org/C2781305811","wikidata":"https://www.wikidata.org/wiki/Q6550901","display_name":"Acartia tonsa","level":4,"score":0.954430341720581},{"id":"https://openalex.org/C115880899","wikidata":"https://www.wikidata.org/wiki/Q1124247","display_name":"Bay","level":2,"score":0.8000051975250244},{"id":"https://openalex.org/C2778043853","wikidata":"https://www.wikidata.org/wiki/Q3808855","display_name":"Acartia","level":4,"score":0.6980739831924438},{"id":"https://openalex.org/C2777235683","wikidata":"https://www.wikidata.org/wiki/Q189973","display_name":"Copepod","level":3,"score":0.6648709774017334},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5930993556976318},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.5255920886993408},{"id":"https://openalex.org/C158836135","wikidata":"https://www.wikidata.org/wiki/Q842627","display_name":"Zooplankton","level":2,"score":0.41358286142349243},{"id":"https://openalex.org/C505870484","wikidata":"https://www.wikidata.org/wiki/Q180538","display_name":"Fishery","level":1,"score":0.4104490876197815},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.36425909399986267},{"id":"https://openalex.org/C84766238","wikidata":"https://www.wikidata.org/wiki/Q25364","display_name":"Crustacean","level":2,"score":0.34898459911346436},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.3262752294540405},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.08488297462463379}],"mesh":[],"locations_count":4,"locations":[{"id":"pmh:oai:digitalcommons.usf.edu:etd-5228","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.usf.edu/etd/4032","pdf_url":"https://digitalcommons.usf.edu/cgi/viewcontent.cgi?article=5228&context=etd","source":{"id":"https://openalex.org/S4377196272","display_name":"Digital Commons - University of South Florida (University of South Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2613432","host_organization_name":"University of South Florida","host_organization_lineage":["https://openalex.org/I2613432"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"USF Tampa Graduate Theses and Dissertations","raw_type":"thesis"},{"id":"pmh:oai:pqdtoai.proquest.com:1508720","doi":null,"is_oa":false,"landing_page_url":"http://pqdtopen.proquest.com/#viewpdf?dispub=1508720","pdf_url":"http://pqdtopen.proquest.com/#viewpdf?dispub=1508720","source":{"id":"https://openalex.org/S7407064308","display_name":"ProQuest Demo Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"thesis"},{"id":"pmh:oai:scholarcommons.usf.edu:etd-5228","doi":null,"is_oa":false,"landing_page_url":"https://scholarcommons.usf.edu/etd/4032","pdf_url":null,"source":{"id":"https://openalex.org/S4377196272","display_name":"Digital Commons - University of South Florida (University of South Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2613432","host_organization_name":"University of South Florida","host_organization_lineage":["https://openalex.org/I2613432"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Graduate Theses and Dissertations","raw_type":"text"},{"id":"mag:1518135671","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.usf.edu/cgi/viewcontent.cgi?article=5228&context=etd","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:digitalcommons.usf.edu:etd-5228","doi":null,"is_oa":true,"landing_page_url":"https://digitalcommons.usf.edu/etd/4032","pdf_url":"https://digitalcommons.usf.edu/cgi/viewcontent.cgi?article=5228&context=etd","source":{"id":"https://openalex.org/S4377196272","display_name":"Digital Commons - University of South Florida (University of South Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I2613432","host_organization_name":"University of South Florida","host_organization_lineage":["https://openalex.org/I2613432"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"USF Tampa Graduate Theses and Dissertations","raw_type":"thesis"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","score":0.5769000053405762,"display_name":"Life below water"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W18918057.pdf","grobid_xml":"https://content.openalex.org/works/W18918057.grobid-xml"},"referenced_works_count":80,"referenced_works":["https://openalex.org/W30736718","https://openalex.org/W62651889","https://openalex.org/W1499500424","https://openalex.org/W1514768507","https://openalex.org/W1534406401","https://openalex.org/W1580682124","https://openalex.org/W1585675205","https://openalex.org/W1968206284","https://openalex.org/W1969773107","https://openalex.org/W1971023873","https://openalex.org/W1972075657","https://openalex.org/W1972163312","https://openalex.org/W1972501876","https://openalex.org/W1973588368","https://openalex.org/W1973970366","https://openalex.org/W1974694173","https://openalex.org/W1980042844","https://openalex.org/W1981646999","https://openalex.org/W1987593864","https://openalex.org/W1990559162","https://openalex.org/W1993129329","https://openalex.org/W2006584707","https://openalex.org/W2007051444","https://openalex.org/W2008090220","https://openalex.org/W2010073612","https://openalex.org/W2011344090","https://openalex.org/W2013315379","https://openalex.org/W2013410948","https://openalex.org/W2017483583","https://openalex.org/W2017876889","https://openalex.org/W2023415089","https://openalex.org/W2024563828","https://openalex.org/W2028546321","https://openalex.org/W2030858494","https://openalex.org/W2031381237","https://openalex.org/W2039591969","https://openalex.org/W2041460494","https://openalex.org/W2041867733","https://openalex.org/W2044530165","https://openalex.org/W2048357119","https://openalex.org/W2050078498","https://openalex.org/W2057999077","https://openalex.org/W2059344622","https://openalex.org/W2060498506","https://openalex.org/W2060759286","https://openalex.org/W2064388905","https://openalex.org/W2066667012","https://openalex.org/W2068788136","https://openalex.org/W2073076441","https://openalex.org/W2078564495","https://openalex.org/W2082593738","https://openalex.org/W2082860967","https://openalex.org/W2088329614","https://openalex.org/W2097706568","https://openalex.org/W2100268234","https://openalex.org/W2101982125","https://openalex.org/W2103256695","https://openalex.org/W2106819173","https://openalex.org/W2107145752","https://openalex.org/W2107533839","https://openalex.org/W2109423978","https://openalex.org/W2109720565","https://openalex.org/W2116430636","https://openalex.org/W2124937554","https://openalex.org/W2127364580","https://openalex.org/W2130455831","https://openalex.org/W2131342905","https://openalex.org/W2132632499","https://openalex.org/W2132926880","https://openalex.org/W2144444867","https://openalex.org/W2153314219","https://openalex.org/W2154234887","https://openalex.org/W2154838357","https://openalex.org/W2158714788","https://openalex.org/W2162296557","https://openalex.org/W2162522205","https://openalex.org/W2169973453","https://openalex.org/W2171735492","https://openalex.org/W2267231513","https://openalex.org/W2286757141"],"related_works":["https://openalex.org/W1518135671","https://openalex.org/W2062608585","https://openalex.org/W2477528076","https://openalex.org/W2171735492","https://openalex.org/W2946504205","https://openalex.org/W4404501157","https://openalex.org/W2202423971","https://openalex.org/W2315431076","https://openalex.org/W2007051444","https://openalex.org/W4206242339"],"abstract_inverted_index":{"Mesozooplankton":[0],"are":[1,73],"of":[2,34,51,65,90,148,168,186,194,314,336],"critical":[3],"importance":[4],"to":[5,17,24,55,82,134,155,166,224,266,293,331],"marine":[6,317,325],"food":[7,15],"webs":[8],"by":[9,178],"transferring":[10],"energy":[11,23],"from":[12,53,274],"the":[13,25,44,63,68,74,84,91,149,160,195,218,233,279,290,301,311,333,339],"microbial":[14],"web":[16],"higher":[18],"trophic":[19],"levels":[20],"and":[21,46,96,115,137,139,228,247],"depositing":[22],"deeper":[26],"ocean":[27],"layers":[28],"through":[29],"fecal":[30],"deposition.":[31],"While":[32],"decades":[33],"research":[35],"have":[36,40],"shown":[37],"that":[38,255,278,322],"viruses":[39,66,85,130,256,305,323,337],"significant":[41],"impacts":[42,64,335],"in":[43,87,99,124,159,201,213,232,244,260,285,296,306],"oceans,":[45],"infect":[47],"a":[48],"wide":[49],"range":[50],"organisms":[52],"bacteria":[54],"whales,":[56],"there":[57],"is":[58,300],"still":[59],"little":[60],"known":[61,135],"about":[62],"on":[67,338],"mesozooplankton":[69,77,340],"community.":[70,341],"As":[71],"copepods":[72,93],"most":[75],"abundant":[76],"group,":[78],"this":[79],"study":[80,303],"sought":[81],"characterize":[83],"present":[86],"natural":[88],"populations":[89,216],"calanoid":[92],"Acartia":[94,110],"tonsa":[95,111,215,246,287],"Labidocera":[97,116],"aestiva":[98,117,162,249],"Tampa":[100],"Bay,":[101],"Florida.":[102],"Viral":[103],"metagenomics":[104],"revealed":[105],"two":[106],"virus":[107,294],"genomes,":[108],"named":[109],"copepod":[112,118,127,235,261,297,326],"circovirus":[113,119],"(AcCopCV)":[114],"(LaCopCV),":[120],"which":[121],"were":[122,176,222,229,242,257],"discovered":[123,291],"their":[125,225],"respective":[126,226],"species.":[128],"Both":[129],"show":[131,277],"amino-acid":[132],"similarities":[133],"circoviruses,":[136],"phylogenetic":[138],"genomic":[140],"analyses":[141],"suggest":[142,321],"they":[143],"may":[144],"be":[145,156,210,283],"divergent":[146],"members":[147],"Circoviridae":[150],"family.":[151],"LaCopCV":[152,175,196],"was":[153,199],"found":[154],"extremely":[157],"prevalent":[158],"L.":[161,202,248],"population,":[163],"with":[164,181],"up":[165],"100%":[167],"individuals":[169],"infected.":[170],"High":[171],"viral":[172,184,206],"loads":[173],"for":[174],"observed":[177,243],"quantitative":[179],"PCR,":[180],"an":[182],"average":[183],"load":[185],"1.3x105":[187],"copies":[188],"per":[189],"individual.":[190],"In":[191],"addition,":[192],"transcription":[193],"replication":[197],"gene":[198],"detected":[200,211,231,284],"aestiva,":[203],"demonstrating":[204,254],"active":[205],"replication.":[207],"AcCopCV":[208,280],"could":[209],"sporadically":[212],"A.":[214,245,286],"throughout":[217],"year.":[219],"The":[220],"circoviruses":[221,315],"specific":[223],"hosts,":[227],"not":[230],"other":[234],"species":[236],"or":[237,270],"surrounding":[238],"seawater.":[239],"Virus-like":[240],"particles":[241],"under":[250],"transmission":[251],"electron":[252],"microscopy,":[253],"actively":[258],"proliferating":[259],"connective":[262],"tissue,":[263,268,288],"as":[264,308,310],"opposed":[265],"gut":[267],"parasites,":[269],"symbionts.":[271],"Preliminary":[272],"results":[273,320],"in-situ":[275],"hybridization":[276],"genome":[281],"can":[282],"linking":[289],"genomes":[292],"propagation":[295],"tissue.":[298],"This":[299],"first":[302,312],"describing":[304],"copepods,":[307],"well":[309],"discovery":[313],"infecting":[316],"organisms.":[318],"These":[319],"impact":[324],"populations,":[327],"necessitating":[328],"further":[329],"studies":[330],"determine":[332],"ecological":[334]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-11-08T12:12:28.789561","created_date":"2025-10-10T00:00:00"}
