{"id":"https://openalex.org/W18804627","doi":null,"title":"M\u00e9thodes de distance pour l'inf\u00e9rence phylog\u00e9nomique","display_name":"M\u00e9thodes de distance pour l'inf\u00e9rence phylog\u00e9nomique","publication_year":2006,"publication_date":"2006-12-05","ids":{"openalex":"https://openalex.org/W18804627","mag":"18804627"},"language":"fr","primary_location":{"id":"pmh:oai:HAL:tel-00142222v1","doi":null,"is_oa":true,"landing_page_url":"https://theses.hal.science/tel-00142222","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Autre [cs.OH]. Universit\u00e9 Montpellier II - Sciences et Techniques du Languedoc, 2006. Fran\u00e7ais. ⟨NNT : ⟩","raw_type":"info:eu-repo/semantics/doctoralThesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://theses.hal.science/tel-00142222","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003921430","display_name":"Alexis Criscuolo","orcid":"https://orcid.org/0000-0002-8212-5215","observed_orcids":["https://orcid.org/0000-0002-8212-5215"]},"institutions":[{"id":"https://openalex.org/I4210105943","display_name":"Institut des Sciences de l'Evolution de Montpellier","ror":"https://ror.org/01cah1n37","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I131077856","https://openalex.org/I159885104","https://openalex.org/I19894307","https://openalex.org/I2746051580","https://openalex.org/I2802818602","https://openalex.org/I4210090127","https://openalex.org/I4210105943","https://openalex.org/I4210107625","https://openalex.org/I4210131494","https://openalex.org/I4210166444"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Alexis Criscuolo","raw_affiliation_strings":["Institut des Sciences de l'Evolution de Montpellier"],"raw_orcid":"https://orcid.org/0000-0002-8212-5215","affiliations":[{"raw_affiliation_string":"Institut des Sciences de l'Evolution de Montpellier","institution_ids":["https://openalex.org/I4210105943"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5003921430"],"corresponding_institution_ids":["https://openalex.org/I4210105943"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phylogenomics","display_name":"phylogenomics","score":0.9200000166893005},{"id":"https://openalex.org/keywords/tree-of-life","display_name":"tree of life","score":0.5799999833106995}],"concepts":[{"id":"https://openalex.org/C15708023","wikidata":"https://www.wikidata.org/wiki/Q80083","display_name":"Humanities","level":1,"score":0.5858080387115479},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.31844043731689453}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:HAL:tel-00142222v1","doi":null,"is_oa":true,"landing_page_url":"https://theses.hal.science/tel-00142222","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Autre [cs.OH]. Universit\u00e9 Montpellier II - Sciences et Techniques du Languedoc, 2006. Fran\u00e7ais. ⟨NNT : ⟩","raw_type":"info:eu-repo/semantics/doctoralThesis"},{"id":"mag:18804627","doi":null,"is_oa":false,"landing_page_url":"https://tel.archives-ouvertes.fr/tel-00142222/document","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:HAL:tel-00142222v1","doi":null,"is_oa":true,"landing_page_url":"https://theses.hal.science/tel-00142222","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Autre [cs.OH]. Universit\u00e9 Montpellier II - Sciences et Techniques du Languedoc, 2006. Fran\u00e7ais. ⟨NNT : ⟩","raw_type":"info:eu-repo/semantics/doctoralThesis"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":191,"referenced_works":["https://openalex.org/W148185056","https://openalex.org/W173702659","https://openalex.org/W240043582","https://openalex.org/W339993192","https://openalex.org/W613993810","https://openalex.org/W791550880","https://openalex.org/W1481642391","https://openalex.org/W1504702575","https://openalex.org/W1525734744","https://openalex.org/W1528672279","https://openalex.org/W1536971344","https://openalex.org/W1538666395","https://openalex.org/W1545641423","https://openalex.org/W1563401818","https://openalex.org/W1580978445","https://openalex.org/W1596422325","https://openalex.org/W1849230861","https://openalex.org/W1894011641","https://openalex.org/W1968248848","https://openalex.org/W1969378935","https://openalex.org/W1970757586","https://openalex.org/W1971273325","https://openalex.org/W1971898771","https://openalex.org/W1973967548","https://openalex.org/W1974476250","https://openalex.org/W1977694535","https://openalex.org/W1978854233","https://openalex.org/W1981662601","https://openalex.org/W1982394988","https://openalex.org/W1982447955","https://openalex.org/W1985530443","https://openalex.org/W1987263656","https://openalex.org/W1989578135","https://openalex.org/W1990263013","https://openalex.org/W1991701064","https://openalex.org/W1992800126","https://openalex.org/W1993092519","https://openalex.org/W1993371508","https://openalex.org/W1995945562","https://openalex.org/W1996630786","https://openalex.org/W1996803884","https://openalex.org/W1996835973","https://openalex.org/W1998459277","https://openalex.org/W2001219812","https://openalex.org/W2002778303","https://openalex.org/W2005471817","https://openalex.org/W2006820723","https://openalex.org/W2006997428","https://openalex.org/W2007270568","https://openalex.org/W2008567981","https://openalex.org/W2008624417","https://openalex.org/W2010334716","https://openalex.org/W2012444040","https://openalex.org/W2015710052","https://openalex.org/W2019182846","https://openalex.org/W2020339453","https://openalex.org/W2020687804","https://openalex.org/W2021416330","https://openalex.org/W2024060531","https://openalex.org/W2026551295","https://openalex.org/W2028942402","https://openalex.org/W2029423003","https://openalex.org/W2030966943","https://openalex.org/W2033854905","https://openalex.org/W2036097912","https://openalex.org/W2037667459","https://openalex.org/W2037744768","https://openalex.org/W2038876634","https://openalex.org/W2039785242","https://openalex.org/W2040668305","https://openalex.org/W2040811618","https://openalex.org/W2041863586","https://openalex.org/W2043887813","https://openalex.org/W2043950637","https://openalex.org/W2044007697","https://openalex.org/W2044789562","https://openalex.org/W2055764798","https://openalex.org/W2057082128","https://openalex.org/W2059149068","https://openalex.org/W2062046553","https://openalex.org/W2062807748","https://openalex.org/W2065461553","https://openalex.org/W2065722925","https://openalex.org/W2068102276","https://openalex.org/W2068223289","https://openalex.org/W2068308871","https://openalex.org/W2068431518","https://openalex.org/W2069359429","https://openalex.org/W2073361658","https://openalex.org/W2075503802","https://openalex.org/W2075665712","https://openalex.org/W2076210581","https://openalex.org/W2076861567","https://openalex.org/W2078109763","https://openalex.org/W2080471862","https://openalex.org/W2083213362","https://openalex.org/W2084792706","https://openalex.org/W2085251214","https://openalex.org/W2088484367","https://openalex.org/W2088490660","https://openalex.org/W2089735371","https://openalex.org/W2090275183","https://openalex.org/W2090493969","https://openalex.org/W2092493619","https://openalex.org/W2094277888","https://openalex.org/W2097706568","https://openalex.org/W2098558111","https://openalex.org/W2100555298","https://openalex.org/W2102102802","https://openalex.org/W2102424972","https://openalex.org/W2102777995","https://openalex.org/W2103546861","https://openalex.org/W2105926960","https://openalex.org/W2108859064","https://openalex.org/W2109280776","https://openalex.org/W2111445984","https://openalex.org/W2112956791","https://openalex.org/W2115049345","https://openalex.org/W2115540609","https://openalex.org/W2117138688","https://openalex.org/W2117327417","https://openalex.org/W2117752525","https://openalex.org/W2118075046","https://openalex.org/W2119033868","https://openalex.org/W2119424436","https://openalex.org/W2120457141","https://openalex.org/W2120819924","https://openalex.org/W2123770356","https://openalex.org/W2124181495","https://openalex.org/W2125087754","https://openalex.org/W2125359798","https://openalex.org/W2126763909","https://openalex.org/W2126784414","https://openalex.org/W2127166992","https://openalex.org/W2127320825","https://openalex.org/W2128565111","https://openalex.org/W2129103781","https://openalex.org/W2130675103","https://openalex.org/W2130727968","https://openalex.org/W2131197564","https://openalex.org/W2131487439","https://openalex.org/W2132917100","https://openalex.org/W2140689424","https://openalex.org/W2146058063","https://openalex.org/W2147660889","https://openalex.org/W2148560957","https://openalex.org/W2150270014","https://openalex.org/W2151043165","https://openalex.org/W2151690408","https://openalex.org/W2152113565","https://openalex.org/W2152176885","https://openalex.org/W2152580193","https://openalex.org/W2157001909","https://openalex.org/W2158340599","https://openalex.org/W2159266221","https://openalex.org/W2159368494","https://openalex.org/W2160350701","https://openalex.org/W2161444534","https://openalex.org/W2162716610","https://openalex.org/W2163892779","https://openalex.org/W2163924163","https://openalex.org/W2164557791","https://openalex.org/W2164997158","https://openalex.org/W2166029961","https://openalex.org/W2166737200","https://openalex.org/W2166838615","https://openalex.org/W2166849181","https://openalex.org/W2170927771","https://openalex.org/W2171422335","https://openalex.org/W2171454877","https://openalex.org/W2171991354","https://openalex.org/W2177605519","https://openalex.org/W2181640320","https://openalex.org/W2279282675","https://openalex.org/W2314531705","https://openalex.org/W2315781448","https://openalex.org/W2316574777","https://openalex.org/W2317907906","https://openalex.org/W2325381499","https://openalex.org/W2328786465","https://openalex.org/W2438580392","https://openalex.org/W2473726166","https://openalex.org/W2482622903","https://openalex.org/W2495494963","https://openalex.org/W2576393997","https://openalex.org/W2576630760","https://openalex.org/W2577202510","https://openalex.org/W2579372702","https://openalex.org/W2989448192","https://openalex.org/W3136367277","https://openalex.org/W3206657856"],"related_works":["https://openalex.org/W4289829838","https://openalex.org/W2896879772","https://openalex.org/W2777391745","https://openalex.org/W616899815","https://openalex.org/W2725970504","https://openalex.org/W779392801","https://openalex.org/W4289780637","https://openalex.org/W2022296639","https://openalex.org/W7066511990","https://openalex.org/W56198911"],"abstract_inverted_index":{"L'inf\u00e9rence":[0],"phylog\u00e9nomique":[1],"cherche":[2],"\u00e0":[3,52,122,164,213],"combiner":[4],"le":[5,15,80],"signal":[6],"\u00e9volutif":[7],"induit":[8],"par":[9],"un":[10,19,162],"ensemble":[11],"de":[12,17,54,82,88,97,103,110,119,124,135,149,168,182,186,201,220,225,228,234,238,253,258],"g\u00e8nes":[13],"dans":[14,246],"but":[16],"construire":[18,256],"unique":[20,133],"arbre":[21,163],"phylog\u00e9n\u00e9tique.":[22],"Elle":[23,105],"peut":[24],"\u00eatre":[25],"d\u00e9compos\u00e9e":[26],"en":[27,131,205,223,240],"trois":[28],"grandes":[29],"familles":[30],"m\u00e9thodologiques:":[31],"la":[32,38,43,58,83,191,215,259],"combinaison":[33,44,59,111,192,206,221],"basse,":[34,207],"qui":[35,46,61,115,128],"s'appuie":[36],"sur":[37,79,95],"concat\u00e9nation":[39],"des":[40,49,142,218,232,251],"diff\u00e9rents":[41,64,70],"g\u00e8nes,":[42],"haute,":[45,222],"consid\u00e8re":[47,116],"l'ensemble":[48],"arbres":[50],"inf\u00e9r\u00e9s":[51],"partir":[53,123,165],"chaque":[55,101,125],"g\u00e8ne,":[56],"et":[57,127,156,208,227],"moyenne,":[60,112,193],"encode":[62],"les":[63,117,129,179,199,243],"signaux":[65],"phylog\u00e9n\u00e9tiques":[66],"puis":[67],"combine":[68,130],"ces":[69,183],"encodages.":[71],"Une":[72],"m\u00e9thode":[73,109],"d'inf\u00e9rence":[74,91],"d'arbre":[75],"est":[76],"ensuite":[77],"appliqu\u00e9e":[78],"r\u00e9sultat":[81],"combinaison.":[84],"Cette":[85,137],"th\u00e8se":[86,146,248],"d\u00e9veloppe":[87],"nouveaux":[89,150],"sc\u00e9narios":[90],"phylog\u00e9nomique,":[92],"principalement":[93],"bas\u00e9s":[94],"l'estimation":[96],"distances":[98,143],"\u00e9volutives":[99],"entre":[100],"paire":[102],"taxons.":[104],"propose":[106],"une":[107,132,210],"nouvelle":[108],"nomm\u00e9e":[113],"SDM,":[114],"matrices":[118],"distance":[120,169],"estim\u00e9es":[121],"g\u00e8ne":[126],"supermatrice":[134],"distance.":[136,187],"derni\u00e8re":[138],"pouvant":[139],"parfois":[140],"contenir":[141],"manquantes,":[144],"cette":[145,247],"d\u00e9crit":[147],"\u00e9galement":[148],"algorithmes,":[151],"nomm\u00e9s":[152],"NJ*,":[153],"UNJ*,":[154],"BioNJ*":[155],"MVR*,":[157],"permettant":[158],"d'inf\u00e9rer":[159],"tr\u00e8s":[160],"rapidement":[161],"d'une":[166],"matrice":[167],"compl\u00e8te":[170],"ou":[171],"incompl\u00e8te.":[172],"De":[173],"nombreuses":[174],"simulations":[175],"ont":[176],"permis":[177],"d'observer":[178],"bonnes":[180],"performances":[181],"nouvelles":[184],"m\u00e9thodes":[185,244],"Initialement":[188],"d\u00e9velopp\u00e9es":[189,245],"pour":[190,255],"elles":[194],"permettent":[195],"toutefois":[196],"d'am\u00e9liorer":[197],"significativement":[198],"r\u00e9sultats":[200],"certaines":[202],"approches":[203],"standards":[204],"repr\u00e9sentent":[209],"alternative":[211],"efficace":[212],"MRP,":[214],"plus":[216,239,241],"utilis\u00e9e":[217],"techniques":[219],"termes":[224],"fiabilit\u00e9":[226],"rapidit\u00e9.":[229],"La":[230],"taille":[231],"jeux":[233],"donn\u00e9es":[235],"phylog\u00e9nomiques":[236],"\u00e9tant":[237],"importante,":[242],"constituent":[249],"ainsi":[250],"outils":[252],"choix":[254],"l'Arbre":[257],"Vie.":[260]},"counts_by_year":[],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}