{"id":"https://openalex.org/W1877755643","doi":null,"title":"Genome-wide identification and analysis of heat shock transcription factor family in cucumber (Cucumis sativus L.).","display_name":"Genome-wide identification and analysis of heat shock transcription factor family in cucumber (Cucumis sativus L.).","publication_year":2013,"publication_date":"2013-11-01","ids":{"openalex":"https://openalex.org/W1877755643","mag":"1877755643"},"language":"en","primary_location":{"id":"mag:1877755643","doi":null,"is_oa":false,"landing_page_url":"https://www.pomics.com/zhou_6_6_2013_449_455.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S178029676","display_name":"Plant Omics","issn_l":"1836-0661","issn":["1836-0661","1836-3644"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","poland-20","russia-white-list-2"],"host_organization":"https://openalex.org/P4324096556","host_organization_name":"Southern Cross Publishing","host_organization_lineage":["https://openalex.org/P4324096556"],"host_organization_lineage_names":["Southern Cross Publishing"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Plant Omics","raw_type":null},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102642031","display_name":"Shengjun Zhou","orcid":"https://orcid.org/0000-0003-0595-4594","observed_orcids":["https://orcid.org/0000-0003-0595-4594"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shengjun Zhou","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100364096","display_name":"Peng Zhang","orcid":"https://orcid.org/0000-0002-2072-4941","observed_orcids":["https://orcid.org/0000-0002-2072-4941","https://orcid.org/0009-0007-2078-4497"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Peng Zhang","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-2072-4941","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041111316","display_name":"Zange Jing","orcid":"https://orcid.org/0000-0001-7287-4645","observed_orcids":["https://orcid.org/0000-0001-7287-4645"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zange Jing","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-7287-4645","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5066761652","display_name":"Jianlei Shi","orcid":"https://orcid.org/0000-0001-9041-3623","observed_orcids":["https://orcid.org/0000-0001-9041-3623"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jianlei Shi","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0001-9041-3623","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.7494,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.73690344,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":96},"biblio":{"volume":"6","issue":"6","first_page":"449","last_page":"455"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.35989999771118164,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.35989999771118164,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.3122999966144562,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10934","display_name":"Heat shock proteins research","score":0.2515000104904175,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/heat-shock-factor","display_name":"heat shock transcription factor","score":0.9559999704360962},{"id":"https://openalex.org/keywords/hsf-gene-family","display_name":"HSF gene family","score":0.9459999799728394},{"id":"https://openalex.org/keywords/cucumber","display_name":"cucumber","score":1.0},{"id":"https://openalex.org/keywords/gene-family-evolution","display_name":"gene family evolution","score":0.7020000219345093},{"id":"https://openalex.org/keywords/phylogenetic-analysis","display_name":"phylogenetic analysis","score":0.9120000004768372},{"id":"https://openalex.org/keywords/orthologs","display_name":"orthologs","score":0.7450000047683716},{"id":"https://openalex.org/keywords/paralogs","display_name":"paralogs","score":0.9980000257492065},{"id":"https://openalex.org/keywords/dna-binding-domain","display_name":"DNA-binding domain","score":0.7269999980926514},{"id":"https://openalex.org/keywords/arabidopsis-thaliana-comparison","display_name":"Arabidopsis thaliana comparison","score":0.6940000057220459},{"id":"https://openalex.org/keywords/chromosome-distribution","display_name":"chromosome distribution","score":0.5529999732971191}],"concepts":[{"id":"https://openalex.org/C2778369795","wikidata":"https://www.wikidata.org/wiki/Q148758","display_name":"Cucumis","level":2,"score":0.9499675035476685},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.896503746509552},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.7529333829879761},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.7402926683425903},{"id":"https://openalex.org/C52981337","wikidata":"https://www.wikidata.org/wiki/Q24782817","display_name":"Heat shock factor","level":5,"score":0.6804825067520142},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6268684267997742},{"id":"https://openalex.org/C5911399","wikidata":"https://www.wikidata.org/wiki/Q2278983","display_name":"Gene family","level":4,"score":0.5964365601539612},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5085426568984985},{"id":"https://openalex.org/C199216141","wikidata":"https://www.wikidata.org/wiki/Q4995178","display_name":"Conserved sequence","level":4,"score":0.4566288888454437},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.456390380859375},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.454928994178772},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.4267309904098511},{"id":"https://openalex.org/C205260736","wikidata":"https://www.wikidata.org/wiki/Q418939","display_name":"Heat shock protein","level":3,"score":0.349826842546463},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.20347031950950623},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.17352703213691711},{"id":"https://openalex.org/C68991219","wikidata":"https://www.wikidata.org/wiki/Q419102","display_name":"Hsp70","level":4,"score":0.067087322473526},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.05091473460197449}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:1877755643","doi":null,"is_oa":false,"landing_page_url":"https://www.pomics.com/zhou_6_6_2013_449_455.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S178029676","display_name":"Plant Omics","issn_l":"1836-0661","issn":["1836-0661","1836-3644"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","poland-20","russia-white-list-2"],"host_organization":"https://openalex.org/P4324096556","host_organization_name":"Southern Cross Publishing","host_organization_lineage":["https://openalex.org/P4324096556"],"host_organization_lineage_names":["Southern Cross Publishing"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Plant Omics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8409000039100647,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1273369401","https://openalex.org/W1500674875","https://openalex.org/W1966235400","https://openalex.org/W1969396288","https://openalex.org/W1970953426","https://openalex.org/W1983232279","https://openalex.org/W1986880896","https://openalex.org/W1990188370","https://openalex.org/W1992021393","https://openalex.org/W2005131012","https://openalex.org/W2006609702","https://openalex.org/W2013683245","https://openalex.org/W2023482892","https://openalex.org/W2027681868","https://openalex.org/W2049505025","https://openalex.org/W2068903746","https://openalex.org/W2070522066","https://openalex.org/W2108624927","https://openalex.org/W2109818458","https://openalex.org/W2122659041","https://openalex.org/W2132632499","https://openalex.org/W2151077180","https://openalex.org/W2163768319","https://openalex.org/W2369534967"],"related_works":["https://openalex.org/W4248926752","https://openalex.org/W1546565628","https://openalex.org/W1997672629","https://openalex.org/W6928704127","https://openalex.org/W2367698616","https://openalex.org/W3092769791","https://openalex.org/W2050918733","https://openalex.org/W2811492176","https://openalex.org/W2292024411","https://openalex.org/W3168556828"],"abstract_inverted_index":{"Heat":[0],"shock":[1],"transcription":[2],"factor":[3],"(HSF)":[4],"plays":[5],"an":[6,37],"important":[7],"role":[8],"in":[9,17,26,67,76,115,184],"the":[10,29,44,50,62,77,126,137,193,199],"expression":[11],"regulation":[12],"of":[13,31,49,54,129,136,173,179,201],"thermal":[14],"response":[15],"genes":[16,75,111,175],"plants.":[18],"However,":[19],"little":[20],"is":[21],"known":[22],"about":[23],"this":[24],"family":[25,53,160,196],"cucumber.":[27],"Recently,":[28],"availability":[30],"cucumber":[32,55,95,140,189,202],"genome":[33,64],"sequences":[34],"has":[35],"provided":[36],"opportunity":[38],"for":[39],"identifying":[40],"these":[41,146],"Hsfs.":[42],"In":[43,132],"present":[45],"study,":[46],"all":[47,116],"members":[48,183],"HSF":[51,74,96,110,130,182,194],"gene":[52,195],"('Cucumis":[56],"sativus'":[57],"L.)":[58],"were":[59,170,187],"identified":[60,70],"from":[61,139,188],"sequenced":[63],"and":[65,86,104,122,141,156,168,176,203],"analyzed":[66],"silico.":[68],"We":[69],"at":[71],"least":[72],"21":[73],"cucumber,":[78],"which":[79],"encode":[80],"proteins":[81,97,147],"with":[82,119],"length":[83],"between":[84],"184":[85],"560":[87],"amino":[88],"acids.":[89],"Multiple":[90],"sequence":[91],"alignments":[92],"showed":[93,144],"that":[94,145,192],"possess":[98],"highly":[99],"conserved":[100,107],"DNA":[101],"binding":[102],"domains":[103],"other":[105],"extensively":[106],"motifs.":[108],"These":[109],"are":[112],"unevenly":[113],"distributed":[114],"seven":[117],"chromosomes,":[118],"chromosomes":[120],"2":[121],"3":[123],"both":[124],"having":[125],"greatest":[127],"number":[128],"genes.":[131,181],"addition,":[133],"phylogenetic":[134],"analysis":[135],"HSFs":[138],"Arabidopsis":[142,204],"thaliana":[143],"could":[148],"be":[149],"divided":[150,164],"into":[151,165],"three":[152],"families":[153],"(A,":[154],"B":[155],"C).":[157],"The":[158],"A":[159],"was":[161],"then":[162],"further":[163],"nine":[166],"subfamilies,":[167],"there":[169],"eight":[171],"pairs":[172,178],"orthologous":[174],"five":[177],"paralogous":[180],"some":[185],"subfamilies":[186],"andArabidopsis,":[190],"indicating":[191],"existed":[197],"before":[198],"separation":[200],"thaliana.":[205]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2026-11-08T12:12:28.789561","created_date":"2016-06-24T00:00:00"}
