{"id":"https://openalex.org/W175442234","doi":null,"title":"The impact of horizontal gene transfers on prokaryotic genome evolution","display_name":"The impact of horizontal gene transfers on prokaryotic genome evolution","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W175442234","mag":"175442234"},"language":"en","primary_location":{"id":"pmh:oai:digitalcommons.lib.uconn.edu:dissertations-4343","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.lib.uconn.edu/dissertations/AAI3269491","pdf_url":null,"source":{"id":"https://openalex.org/S4377196438","display_name":"OpenCommons - UConn (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002410339","display_name":"Pascal Lapierre","orcid":"https://orcid.org/0000-0003-1238-0955","observed_orcids":["https://orcid.org/0000-0003-1238-0955"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Pascal Lapierre","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-1238-0955","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5002410339"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9785000085830688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9785000085830688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.005400000140070915,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.00430000014603138,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/horizontal-gene-transfer","display_name":"horizontal gene transfer","score":1.0},{"id":"https://openalex.org/keywords/protein-fold-evolution","display_name":"protein fold evolution","score":0.5830000042915344},{"id":"https://openalex.org/keywords/pan-genome","display_name":"pan-genome","score":0.593999981880188},{"id":"https://openalex.org/keywords/metagenome","display_name":"metagenome","score":0.8659999966621399},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"comparative genomics","score":0.6430000066757202}],"concepts":[{"id":"https://openalex.org/C92938381","wikidata":"https://www.wikidata.org/wiki/Q83185","display_name":"Horizontal gene transfer","level":4,"score":0.7610085010528564},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5521442890167236},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5175382494926453},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47648710012435913},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.46091702580451965},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3669673800468445},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35248494148254395}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:digitalcommons.lib.uconn.edu:dissertations-4343","doi":null,"is_oa":false,"landing_page_url":"https://digitalcommons.lib.uconn.edu/dissertations/AAI3269491","pdf_url":null,"source":{"id":"https://openalex.org/S4377196438","display_name":"OpenCommons - UConn (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},{"id":"pmh:oai:opencommons.uconn.edu:dissertations-4343","doi":null,"is_oa":false,"landing_page_url":"http://gateway.proquest.com/openurl?url_ver=Z39.88-2004&res_dat=xri:pqdiss&rft_val_fmt=info:ofi/fmt:kev:mtx:dissertation&rft_dat=xri:pqdiss:3269491","pdf_url":null,"source":{"id":"https://openalex.org/S4377196438","display_name":"OpenCommons - UConn (University of Connecticut)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I140172145","host_organization_name":"University of Connecticut","host_organization_lineage":["https://openalex.org/I140172145"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Doctoral Dissertations","raw_type":"text"},{"id":"mag:175442234","doi":null,"is_oa":false,"landing_page_url":"http://digitalcommons.uconn.edu/dissertations/AAI3269491","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2793602347","https://openalex.org/W980153270","https://openalex.org/W2479258543","https://openalex.org/W7096496354","https://openalex.org/W2127551479","https://openalex.org/W6892300915","https://openalex.org/W2001137032","https://openalex.org/W2128903938","https://openalex.org/W2501355869","https://openalex.org/W2027031393"],"abstract_inverted_index":{"With":[0],"the":[1,57,69,72,83,104,146,152,162,192,221,228,250,262,296],"advent":[2],"of":[3,23,50,59,71,74,85,103,110,141,151,161,184,194,211,216,237,255,264,274,277,279,285,292,298],"whole":[4,121],"genome":[5,86,117,280],"sequencing,":[6],"it":[7,27],"became":[8],"apparent":[9],"that":[10,39,98,173],"horizontal":[11],"transfer":[12],"gene":[13,41,126,137,148,177],"(HGT)":[14],"is":[15,36,287],"not":[16,174],"limited":[17],"to":[18,82,94,191,233,261],"a":[19,31,45,120,234,272],"few":[20,32],"specific":[21,136],"sets":[22],"genes":[24,212],"nor":[25],"does":[26],"only":[28,175],"occur":[29],"between":[30],"select":[33],"species.":[34,55],"It":[35],"now":[37,203,243],"believed":[38],"such":[40],"transfers":[42,127,178],"have":[43,156,171,231],"played":[44],"predominant":[46],"role":[47],"for":[48,53,180],"evolution":[49,73,87,118,281,297],"life,":[51],"especially":[52],"prokaryotic":[54,217],"Over":[56],"course":[58],"my":[60,111],"graduate":[61],"years,":[62],"tremendous":[63],"progress":[64],"has":[65,79,92],"been":[66],"made":[67],"in":[68,88,198,227,249,290],"study":[70],"life.":[75,299],"Fully":[76],"sequenced":[77],"genomes":[78,130,201,257],"allowed":[80],"access":[81,232],"dynamics":[84],"unprecedented":[89],"ways":[90],"and":[91,145,164,182,213,267,282],"led":[93],"surprising":[95],"new":[96,185,195,247],"discoveries":[97],"are":[99,128,176,242,258],"redefining":[100],"our":[101,159,214,275],"comprehension":[102],"evolution.":[105],"^":[106,240,300],"The":[107],"main":[108],"topic":[109],"doctoral":[112],"thesis":[113,270],"focuses":[114],"on":[115,124,168,295],"studying":[116],"as":[119,206],"with":[122],"emphasis":[123],"how":[125],"shaping":[129],"over":[131],"time.":[132],"By":[133],"looking":[134],"at":[135],"histories,":[138],"genomic":[139,251],"comparisons":[140],"closely":[142],"related":[143],"species":[144,218],"complete":[147],"family":[149],"repertoire":[150],"bacterial":[153],"domain,":[154],"I":[155,170],"further":[157],"advanced":[158],"knowledge":[160,278],"mechanisms":[163],"evolutionary":[165],"forces":[166],"acting":[167],"genomes.":[169],"found":[172],"important":[179],"adaptation":[181],"colonization":[183],"niches":[186],"but":[187],"may":[188],"also":[189],"contribute":[190],"creation":[193],"protein":[196],"fold":[197],"nature.":[199],"Additionally,":[200],"must":[202],"be":[204],"seen":[205],"an":[207,245],"ever":[208],"changing":[209],"collection":[210],"definition":[215],"should":[219],"include":[220],"environmental":[222],"components,":[223],"i.e.":[224],"microorganisms":[225],"living":[226],"same":[229],"environment":[230],"shared":[235],"pool":[236],"genetic":[238],"material.":[239],"We":[241],"entering":[244],"exciting":[246],"phase":[248],"era":[252],"where":[253],"studies":[254],"individual":[256],"giving":[259],"way":[260],"exploration":[263],"communal":[265],"meta-genomes":[266],"pan-genomes.":[268],"This":[269],"offers":[271],"view":[273],"state":[276],"provides":[283],"glimpses":[284],"what":[286],"lying":[288],"ahead":[289],"term":[291],"future":[293],"research":[294]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-11-06T12:05:46.655746","created_date":"2016-06-24T00:00:00"}
