{"id":"https://openalex.org/W1605010014","doi":null,"title":"The earthworm microbiome","display_name":"The earthworm microbiome","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W1605010014","mag":"1605010014"},"language":"nl","primary_location":{"id":"pmh:oai:https://orca.cardiff.ac.uk:72781","doi":null,"is_oa":false,"landing_page_url":"https://orca.cardiff.ac.uk/id/eprint/72781/1/2015PassPhD.pdf","pdf_url":"https://orca.cardiff.ac.uk/id/eprint/72781/1/2015PassPhD.pdf","source":{"id":"https://openalex.org/S4306401195","display_name":"ORCA Online Research @Cardiff (Cardiff University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79510175","host_organization_name":"Cardiff University","host_organization_lineage":["https://openalex.org/I79510175"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010676341","display_name":"Daniel Antony Pass","orcid":"https://orcid.org/0000-0003-2799-8432","observed_orcids":["https://orcid.org/0000-0003-2799-8432"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Daniel A. Pass","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-2799-8432","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5010676341"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.4625999927520752,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.4625999927520752,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.32179999351501465,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.050599999725818634,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/lumbricus-rubellus","display_name":"Lumbricus rubellus","score":0.984000027179718},{"id":"https://openalex.org/keywords/host-associated-bacteria","display_name":"host-associated bacteria","score":0.7229999899864197},{"id":"https://openalex.org/keywords/soil-microbiome","display_name":"soil microbiome","score":0.8289999961853027},{"id":"https://openalex.org/keywords/core-bacterial-community","display_name":"core bacterial community","score":0.6650000214576721},{"id":"https://openalex.org/keywords/symbiosis","display_name":"symbiosis","score":0.6449999809265137},{"id":"https://openalex.org/keywords/anthropogenic-pollution","display_name":"anthropogenic pollution","score":0.640999972820282},{"id":"https://openalex.org/keywords/arsenic","display_name":"arsenic","score":0.7459999918937683},{"id":"https://openalex.org/keywords/environmental-stressors","display_name":"environmental stressors","score":0.6779999732971191},{"id":"https://openalex.org/keywords/novel-bacterial-species","display_name":"novel bacterial species","score":0.7409999966621399}],"concepts":[{"id":"https://openalex.org/C2776332788","wikidata":"https://www.wikidata.org/wiki/Q124378","display_name":"Earthworm","level":2,"score":0.8309030532836914},{"id":"https://openalex.org/C2779955632","wikidata":"https://www.wikidata.org/wiki/Q1721412","display_name":"Lumbricus rubellus","level":3,"score":0.8291230201721191},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7186896204948425},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6107414364814758},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.5720820426940918},{"id":"https://openalex.org/C110872660","wikidata":"https://www.wikidata.org/wiki/Q37813","display_name":"Ecosystem","level":2,"score":0.5362960696220398},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.5137847065925598},{"id":"https://openalex.org/C81407943","wikidata":"https://www.wikidata.org/wiki/Q17149178","display_name":"Microbial population biology","level":3,"score":0.5127571821212769},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.5084144473075867},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.41177529096603394},{"id":"https://openalex.org/C32120771","wikidata":"https://www.wikidata.org/wiki/Q962054","display_name":"Ecosystem engineer","level":3,"score":0.4108033776283264},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.17985188961029053},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.06775379180908203},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:https://orca.cardiff.ac.uk:72781","doi":null,"is_oa":false,"landing_page_url":"https://orca.cardiff.ac.uk/id/eprint/72781/1/2015PassPhD.pdf","pdf_url":"https://orca.cardiff.ac.uk/id/eprint/72781/1/2015PassPhD.pdf","source":{"id":"https://openalex.org/S4306401195","display_name":"ORCA Online Research @Cardiff (Cardiff University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I79510175","host_organization_name":"Cardiff University","host_organization_lineage":["https://openalex.org/I79510175"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},{"id":"pmh:oai:uilis.unsyiah.ac.id:57080","doi":null,"is_oa":false,"landing_page_url":"http://uilis.unsyiah.ac.id/opentheses/items/show/57080","pdf_url":null,"source":{"id":"https://openalex.org/S4377196378","display_name":"UPT. Syiah Kuala University Library (Syiah Kuala University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I187494767","host_organization_name":"Universitas Syiah Kuala","host_organization_lineage":["https://openalex.org/I187494767"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Thesis"},{"id":"mag:1605010014","doi":null,"is_oa":false,"landing_page_url":"http://orca.cf.ac.uk/72781/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4390000104904175,"display_name":"Life on land","id":"https://metadata.un.org/sdg/15"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":155,"referenced_works":["https://openalex.org/W122614353","https://openalex.org/W136575950","https://openalex.org/W307353604","https://openalex.org/W1229935527","https://openalex.org/W1493874478","https://openalex.org/W1505461764","https://openalex.org/W1543819877","https://openalex.org/W1587026990","https://openalex.org/W1820165080","https://openalex.org/W1920295170","https://openalex.org/W1951784147","https://openalex.org/W1965345362","https://openalex.org/W1967901572","https://openalex.org/W1971050862","https://openalex.org/W1971789155","https://openalex.org/W1972427910","https://openalex.org/W1974521323","https://openalex.org/W1975093609","https://openalex.org/W1975202380","https://openalex.org/W1977145781","https://openalex.org/W1979430289","https://openalex.org/W1980268367","https://openalex.org/W1980680725","https://openalex.org/W1980914602","https://openalex.org/W1981959283","https://openalex.org/W1982059413","https://openalex.org/W1983014515","https://openalex.org/W1986216337","https://openalex.org/W1987074071","https://openalex.org/W1987214309","https://openalex.org/W1988925586","https://openalex.org/W1989445815","https://openalex.org/W1991356892","https://openalex.org/W1991486768","https://openalex.org/W1993984398","https://openalex.org/W2000072710","https://openalex.org/W2001606745","https://openalex.org/W2002972174","https://openalex.org/W2003806322","https://openalex.org/W2004973212","https://openalex.org/W2008194879","https://openalex.org/W2009990764","https://openalex.org/W2010375956","https://openalex.org/W2011171339","https://openalex.org/W2017425843","https://openalex.org/W2017833395","https://openalex.org/W2020302957","https://openalex.org/W2022716710","https://openalex.org/W2024144463","https://openalex.org/W2024586242","https://openalex.org/W2028995974","https://openalex.org/W2031076440","https://openalex.org/W2031392513","https://openalex.org/W2032727742","https://openalex.org/W2034318012","https://openalex.org/W2034833171","https://openalex.org/W2037563922","https://openalex.org/W2038704179","https://openalex.org/W2038722621","https://openalex.org/W2042885189","https://openalex.org/W2046536232","https://openalex.org/W2047774330","https://openalex.org/W2048550695","https://openalex.org/W2048687101","https://openalex.org/W2052969143","https://openalex.org/W2055043387","https://openalex.org/W2055151521","https://openalex.org/W2055159218","https://openalex.org/W2055814389","https://openalex.org/W2059395813","https://openalex.org/W2061722465","https://openalex.org/W2061868406","https://openalex.org/W2062539478","https://openalex.org/W2064466729","https://openalex.org/W2065527844","https://openalex.org/W2065689716","https://openalex.org/W2066471160","https://openalex.org/W2068621604","https://openalex.org/W2069732910","https://openalex.org/W2071793635","https://openalex.org/W2072970694","https://openalex.org/W2074390177","https://openalex.org/W2074982729","https://openalex.org/W2075347554","https://openalex.org/W2076359467","https://openalex.org/W2079480740","https://openalex.org/W2080729271","https://openalex.org/W2083375990","https://openalex.org/W2084791457","https://openalex.org/W2086809297","https://openalex.org/W2087008771","https://openalex.org/W2088833470","https://openalex.org/W2091921834","https://openalex.org/W2092682559","https://openalex.org/W2093925925","https://openalex.org/W2095132285","https://openalex.org/W2103236766","https://openalex.org/W2103544286","https://openalex.org/W2104245562","https://openalex.org/W2106308757","https://openalex.org/W2106557091","https://openalex.org/W2107127930","https://openalex.org/W2108077860","https://openalex.org/W2109218242","https://openalex.org/W2110300022","https://openalex.org/W2110546317","https://openalex.org/W2114337384","https://openalex.org/W2116448002","https://openalex.org/W2117457769","https://openalex.org/W2119311989","https://openalex.org/W2121980713","https://openalex.org/W2124351063","https://openalex.org/W2124575137","https://openalex.org/W2124715997","https://openalex.org/W2126013011","https://openalex.org/W2127189538","https://openalex.org/W2128557979","https://openalex.org/W2129685040","https://openalex.org/W2129914134","https://openalex.org/W2132632499","https://openalex.org/W2132904441","https://openalex.org/W2134898953","https://openalex.org/W2135077222","https://openalex.org/W2135671333","https://openalex.org/W2139526205","https://openalex.org/W2141919494","https://openalex.org/W2142576395","https://openalex.org/W2143371380","https://openalex.org/W2145336165","https://openalex.org/W2148690801","https://openalex.org/W2149207759","https://openalex.org/W2150463869","https://openalex.org/W2152383265","https://openalex.org/W2152517583","https://openalex.org/W2152805980","https://openalex.org/W2153072919","https://openalex.org/W2153109441","https://openalex.org/W2154746289","https://openalex.org/W2154969423","https://openalex.org/W2156814453","https://openalex.org/W2158256609","https://openalex.org/W2159237810","https://openalex.org/W2159675211","https://openalex.org/W2161442192","https://openalex.org/W2166556403","https://openalex.org/W2166991761","https://openalex.org/W2167885571","https://openalex.org/W2170024099","https://openalex.org/W2170129994","https://openalex.org/W2180578415","https://openalex.org/W2204749494","https://openalex.org/W2263700154","https://openalex.org/W2334607273","https://openalex.org/W2502361053","https://openalex.org/W3174993126"],"related_works":["https://openalex.org/W1905809913","https://openalex.org/W1987707967","https://openalex.org/W2019023172","https://openalex.org/W4386648885","https://openalex.org/W7165756206","https://openalex.org/W4244142283","https://openalex.org/W3160336165","https://openalex.org/W3015474115","https://openalex.org/W2061722465","https://openalex.org/W7213470468"],"abstract_inverted_index":{"Background:":[0],"\\nHost-associated":[1],"microbial":[2,89,135],"communities":[3,90],"play":[4],"a":[5,9,26,74,161,244],"significant":[6,228,252],"role":[7],"in":[8,24],"species\u2019":[10],"environmental":[11,56,168],"interactions,":[12],"often":[13],"performing":[14],"functions":[15],"unachievable":[16],"by":[17],"the":[18,30,36,84,92,132,152,171,188,200,210,224,231,251,258,265,269,273,279],"eukaryotic":[19,143],"host,":[20],"and":[21,32,38,58,68,91,102,124,157,167,205,278],"is":[22,59,96,185],"essential":[23,61],"developing":[25],"comprehensive":[27],"understanding":[28],"of":[29,48,54,121,131,137,140,151,160,164,193,254,268],"species":[31,77,144,195],"its":[33],"impact":[34,86,158,216,253],"on":[35,87,170,217,230,257,283],"local":[37],"global":[39],"ecosystem.":[40],"\\n":[41,98,175],"\\nEarthworms":[42],"(Lumbricina)":[43],"habituate":[44],"almost":[45],"every":[46],"type":[47],"soil":[49,94,219],"environment":[50],"globally,":[51],"including":[52,147],"sites":[53],"severe":[55],"stress":[57],"an":[60],"ecosystem":[62],"engineer,":[63],"central":[64],"to":[65,145,237,276],"healthy":[66],"natural":[67],"agricultural":[69],"soils.":[70],"To":[71],"date,":[72,146],"only":[73],"singular":[75],"symbiotic":[76,240],"(Verminephrobacter":[78],"sp.)":[79],"has":[80,112,128,181,212,248],"been":[81,114,182,197,249],"identified,":[82],"but":[83],"earthworm":[85,201,211],"transient":[88,232],"surrounding":[93,189],"microbiome":[95,260],"profound.":[97],"\\nMethods:":[99],"\\nPrevious":[100],"culture":[101],"molecular":[103],"based":[104],"studies":[105],"found":[106],"earthworm-associated":[107],"microbiota":[108],"unlikely":[109],"however,":[110],"this":[111],"not":[113],"explored":[115],"using":[116],"High":[117],"Throughput":[118],"Sequencing.":[119],"Utilisation":[120],"Illumina,":[122],"454":[123],"Ion":[125],"Torrent":[126],"sequencing":[127],"enabled":[129],"production":[130],"highest":[133],"resolution":[134],"analysis":[136,159,236],"host-associated":[138],"bacteria":[139],"any":[141],"single":[142],"spatial":[148],"bacterial":[149,179],"localisation":[150],"entire":[153],"Lumbricus":[154],"rubellus":[155],"organism":[156],"wide":[162],"range":[163],"anthropogenic":[165,255],"contaminants":[166],"stressors":[169],"basal":[172],"microbiomic":[173],"community.":[174],"\\nResults:":[176],"\\nA":[177],"core":[178],"community":[180,247],"described":[183],"which":[184],"distinct":[186],"from":[187],"soil.":[190],"A":[191],"number":[192],"novel":[194],"have":[196],"associated":[198],"with":[199],"crop,":[202],"body":[203],"wall":[204],"hindgut,":[206],"contravening":[207],"claims":[208],"that":[209,223],"limited":[213],"or":[214],"no":[215],"ingested":[218],"bacteria.":[220],"This":[221],"demonstrate":[222],"host":[225,259,284],"properties":[226],"impart":[227],"effects":[229],"population,":[233],"demanding":[234],"further":[235],"determine":[238],"potential":[239,280],"functionality.":[241],"However,":[242],"while":[243],"biologically":[245],"important":[246],"described,":[250],"contamination":[256],"must":[261],"be":[262],"considered":[263],"given":[264],"observed":[266],"eradication":[267],"Verminephrobacter":[270],"symbiont":[271],"during":[272],"host\u2019s":[274],"exposure":[275],"arsenic":[277],"subsequent":[281],"implications":[282],"health.":[285]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
