{"id":"https://openalex.org/W1598875591","doi":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","title":"Nitrogen Metabolism and Kinetics of Ammonia-Oxidizing Archaea","display_name":"Nitrogen Metabolism and Kinetics of Ammonia-Oxidizing Archaea","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1598875591","doi":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","mag":"1598875591","pmid":"https://pubmed.ncbi.nlm.nih.gov/21514476"},"language":"en","primary_location":{"id":"doi:10.1016/b978-0-12-386489-5.00019-1","doi":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","pdf_url":null,"source":{"id":"https://openalex.org/S182211142","display_name":"Methods in enzymology on CD-ROM/Methods in enzymology","issn_l":"0076-6879","issn":["0076-6879","1079-2376","1557-7988"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-3"],"host_organization":"https://openalex.org/P4310319955","host_organization_name":"Academic Press","host_organization_lineage":["https://openalex.org/P4310319955","https://openalex.org/P4310320990"],"host_organization_lineage_names":["Academic Press","Elsevier BV"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in Enzymology","raw_type":"book-chapter"},"volume":{"id":"https://openalex.org/W4241068778","display_name":"Research on Nitrification and Related Processes, Part B"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031369249","display_name":"Willm Martens\u2010Habbena","orcid":"https://orcid.org/0000-0002-8495-9125","observed_orcids":["https://orcid.org/0000-0002-8495-9125"]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Willm Martens-Habbena","raw_affiliation_strings":["Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075204768","display_name":"David A. Stahl","orcid":"https://orcid.org/0000-0003-3051-841X","observed_orcids":["https://orcid.org/0000-0003-3051-841X","https://orcid.org/0000-0003-2782-1047"]},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David A. Stahl","raw_affiliation_strings":["Department of Civil and Environmental Engineering; University of Washington; Seattle Washington USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Civil and Environmental Engineering; University of Washington; Seattle Washington USA","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I201448701"],"apc_list":null,"apc_paid":null,"fwci":9.0999,"has_fulltext":false,"cited_by_count":78,"citation_normalized_percentile":{"value":0.98166667,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"496","issue":null,"first_page":"465","last_page":"487"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.524399995803833,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.524399995803833,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10564","display_name":"Wastewater Treatment and Nitrogen Removal","score":0.34130001068115234,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12688","display_name":"Microbial metabolism and enzyme function","score":0.07699999958276749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ammonia-oxidizing-archaea","display_name":"ammonia-oxidizing archaea","score":0.9869999885559082},{"id":"https://openalex.org/keywords/nitrosopumilus-maritimus","display_name":"Nitrosopumilus maritimus","score":0.9750000238418579},{"id":"https://openalex.org/keywords/ammonia-monooxygenase","display_name":"ammonia monooxygenase","score":0.8100000023841858},{"id":"https://openalex.org/keywords/nitrification","display_name":"nitrification","score":0.718999981880188},{"id":"https://openalex.org/keywords/nitrogen-cycle","display_name":"nitrogen cycling","score":0.6650000214576721},{"id":"https://openalex.org/keywords/respirometry","display_name":"respirometry","score":0.7160000205039978},{"id":"https://openalex.org/keywords/oxygen-uptake-rate","display_name":"oxygen uptake rate","score":0.5370000004768372},{"id":"https://openalex.org/keywords/kinetic-parameters","display_name":"kinetic parameters","score":0.4620000123977661},{"id":"https://openalex.org/keywords/ammonia-oxidation","display_name":"ammonia oxidation","score":0.4749999940395355},{"id":"https://openalex.org/keywords/nitrifying-bacteria","display_name":"nitrifying bacteria","score":0.5920000076293945}],"concepts":[{"id":"https://openalex.org/C550995028","wikidata":"https://www.wikidata.org/wiki/Q10872","display_name":"Archaea","level":3,"score":0.9503262042999268},{"id":"https://openalex.org/C164752452","wikidata":"https://www.wikidata.org/wiki/Q668677","display_name":"Nitrification","level":3,"score":0.7021383047103882},{"id":"https://openalex.org/C2780061811","wikidata":"https://www.wikidata.org/wiki/Q4144746","display_name":"Ammonia monooxygenase","level":4,"score":0.6506770849227905},{"id":"https://openalex.org/C2776989901","wikidata":"https://www.wikidata.org/wiki/Q134668","display_name":"Gammaproteobacteria","level":4,"score":0.6417484283447266},{"id":"https://openalex.org/C2779258044","wikidata":"https://www.wikidata.org/wiki/Q1186957","display_name":"Thaumarchaeota","level":4,"score":0.6281483769416809},{"id":"https://openalex.org/C49045045","wikidata":"https://www.wikidata.org/wiki/Q82551","display_name":"Nitrogen cycle","level":3,"score":0.6156760454177856},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5852236151695251},{"id":"https://openalex.org/C175605896","wikidata":"https://www.wikidata.org/wiki/Q39833","display_name":"Microorganism","level":3,"score":0.5793453454971313},{"id":"https://openalex.org/C27911776","wikidata":"https://www.wikidata.org/wiki/Q834023","display_name":"Thermophile","level":3,"score":0.5207502841949463},{"id":"https://openalex.org/C107872376","wikidata":"https://www.wikidata.org/wiki/Q321355","display_name":"Environmental chemistry","level":1,"score":0.4765368402004242},{"id":"https://openalex.org/C2776382133","wikidata":"https://www.wikidata.org/wiki/Q4087","display_name":"Ammonia","level":2,"score":0.4659128487110138},{"id":"https://openalex.org/C98614847","wikidata":"https://www.wikidata.org/wiki/Q975983","display_name":"Anoxygenic photosynthesis","level":4,"score":0.427263468503952},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.40752312541007996},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.4070267677307129},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.23088115453720093},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.20314040780067444},{"id":"https://openalex.org/C537208039","wikidata":"https://www.wikidata.org/wiki/Q627","display_name":"Nitrogen","level":2,"score":0.16986814141273499},{"id":"https://openalex.org/C197322856","wikidata":"https://www.wikidata.org/wiki/Q335183","display_name":"Phototroph","level":3,"score":0.12090542912483215},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.0635496973991394},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000641","descriptor_name":"Ammonia","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D000641","descriptor_name":"Ammonia","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":true},{"descriptor_ui":"D001105","descriptor_name":"Archaea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008722","descriptor_name":"Methods","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009584","descriptor_name":"Nitrogen","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D009584","descriptor_name":"Nitrogen","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D043370","descriptor_name":"Nitrosomonas europaea","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D043370","descriptor_name":"Nitrosomonas europaea","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D058458","descriptor_name":"Nitrogen Cycle","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D058458","descriptor_name":"Nitrogen Cycle","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D058465","descriptor_name":"Nitrification","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1016/b978-0-12-386489-5.00019-1","doi":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","is_oa":false,"landing_page_url":"https://doi.org/10.1016/b978-0-12-386489-5.00019-1","pdf_url":null,"source":{"id":"https://openalex.org/S182211142","display_name":"Methods in enzymology on CD-ROM/Methods in enzymology","issn_l":"0076-6879","issn":["0076-6879","1079-2376","1557-7988"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-3"],"host_organization":"https://openalex.org/P4310319955","host_organization_name":"Academic Press","host_organization_lineage":["https://openalex.org/P4310319955","https://openalex.org/P4310320990"],"host_organization_lineage_names":["Academic Press","Elsevier BV"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in Enzymology","raw_type":"book-chapter"},{"id":"pmid:21514476","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21514476","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Methods in enzymology","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":78,"referenced_works":["https://openalex.org/W95595901","https://openalex.org/W142039677","https://openalex.org/W1491619236","https://openalex.org/W1523470136","https://openalex.org/W1536042751","https://openalex.org/W1543310488","https://openalex.org/W1559364095","https://openalex.org/W1606825036","https://openalex.org/W1644271280","https://openalex.org/W1679240242","https://openalex.org/W1702544395","https://openalex.org/W1807365116","https://openalex.org/W1854656596","https://openalex.org/W1895584253","https://openalex.org/W1906835654","https://openalex.org/W1970281688","https://openalex.org/W1972994206","https://openalex.org/W1978239327","https://openalex.org/W1981436073","https://openalex.org/W1986580580","https://openalex.org/W1988989705","https://openalex.org/W1989937096","https://openalex.org/W2001151638","https://openalex.org/W2004091484","https://openalex.org/W2011081281","https://openalex.org/W2016298022","https://openalex.org/W2020321453","https://openalex.org/W2020699319","https://openalex.org/W2022751147","https://openalex.org/W2023858439","https://openalex.org/W2025072520","https://openalex.org/W2028360015","https://openalex.org/W2032604387","https://openalex.org/W2034684171","https://openalex.org/W2038968086","https://openalex.org/W2049681765","https://openalex.org/W2060107275","https://openalex.org/W2063131121","https://openalex.org/W2066831210","https://openalex.org/W2068702909","https://openalex.org/W2071905990","https://openalex.org/W2079094106","https://openalex.org/W2079828141","https://openalex.org/W2079905572","https://openalex.org/W2083678046","https://openalex.org/W2084964489","https://openalex.org/W2085017487","https://openalex.org/W2094177650","https://openalex.org/W2095770697","https://openalex.org/W2103317113","https://openalex.org/W2104185722","https://openalex.org/W2104716479","https://openalex.org/W2107240865","https://openalex.org/W2109406158","https://openalex.org/W2109615957","https://openalex.org/W2113350312","https://openalex.org/W2113475314","https://openalex.org/W2114576684","https://openalex.org/W2116582565","https://openalex.org/W2116951543","https://openalex.org/W2118999324","https://openalex.org/W2119945867","https://openalex.org/W2130167404","https://openalex.org/W2132213532","https://openalex.org/W2140551328","https://openalex.org/W2142620138","https://openalex.org/W2154726157","https://openalex.org/W2155717515","https://openalex.org/W2157718604","https://openalex.org/W2157965057","https://openalex.org/W2159248304","https://openalex.org/W2161034675","https://openalex.org/W2169211592","https://openalex.org/W2169409681","https://openalex.org/W2175037281","https://openalex.org/W2285694192","https://openalex.org/W2611172103","https://openalex.org/W6603826131"],"related_works":["https://openalex.org/W2142620138","https://openalex.org/W4254050924","https://openalex.org/W121425596","https://openalex.org/W2003738804","https://openalex.org/W1606825036","https://openalex.org/W1570684276","https://openalex.org/W4384343045","https://openalex.org/W2069758447","https://openalex.org/W1999513388","https://openalex.org/W2128436130"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":2}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}