{"id":"https://openalex.org/W1594852568","doi":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","title":"Mutation of the miaA gene of Agrobacterium tumefaciens results in reduced vir gene expression","display_name":"Mutation of the miaA gene of Agrobacterium tumefaciens results in reduced vir gene expression","publication_year":1992,"publication_date":"1992-02-01","ids":{"openalex":"https://openalex.org/W1594852568","doi":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","mag":"1594852568","pmid":"https://pubmed.ncbi.nlm.nih.gov/1735704","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/206401"},"language":"en","primary_location":{"id":"doi:10.1128/jb.174.4.1086-1098.1992","doi":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","is_oa":false,"landing_page_url":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","pdf_url":null,"source":{"id":"https://openalex.org/S133274750","display_name":"Journal of Bacteriology","issn_l":"0021-9193","issn":["0021-9193","1067-8832","1098-5530"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bacteriology","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/206401","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"J Gray","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J Gray","raw_affiliation_strings":["Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392","institution_ids":["https://openalex.org/I219193219"]}]},{"author_position":"middle","author":{"id":null,"display_name":"J Wang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J Wang","raw_affiliation_strings":["Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392","institution_ids":["https://openalex.org/I219193219"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015132414","display_name":"Stanton B. Gelvin","orcid":"https://orcid.org/0000-0002-1603-3734","observed_orcids":["https://orcid.org/0000-0002-1603-3734"]},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S B Gelvin","raw_affiliation_strings":["Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392","institution_ids":["https://openalex.org/I219193219"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I219193219"],"apc_list":null,"apc_paid":null,"fwci":7.5028,"has_fulltext":false,"cited_by_count":81,"citation_normalized_percentile":{"value":0.97108651,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":88,"max":99},"biblio":{"volume":"174","issue":"4","first_page":"1086","last_page":"1098"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.8773999810218811,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.8773999810218811,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.10159999877214432,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.0044999998062849045,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/agrobacterium-tumefaciens","display_name":"Agrobacterium tumefaciens","score":0.9850000143051147},{"id":"https://openalex.org/keywords/acetosyringone","display_name":"acetosyringone","score":0.7670000195503235},{"id":"https://openalex.org/keywords/trna-modification","display_name":"tRNA modification","score":0.7369999885559082},{"id":"https://openalex.org/keywords/translation-efficiency","display_name":"translation efficiency","score":0.7889999747276306},{"id":"https://openalex.org/keywords/genetic-complementation","display_name":"gene complementation","score":0.7919999957084656},{"id":"https://openalex.org/keywords/host-specificity","display_name":"host specificity","score":0.5389999747276306}],"concepts":[{"id":"https://openalex.org/C2776162087","wikidata":"https://www.wikidata.org/wiki/Q131472","display_name":"Agrobacterium tumefaciens","level":4,"score":0.9019820094108582},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8975390791893005},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6714596152305603},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.6117618680000305},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5801123380661011},{"id":"https://openalex.org/C2780874738","wikidata":"https://www.wikidata.org/wiki/Q906309","display_name":"Acetosyringone","level":5,"score":0.5646105408668518},{"id":"https://openalex.org/C98151556","wikidata":"https://www.wikidata.org/wiki/Q179545","display_name":"Ti plasmid","level":5,"score":0.542772650718689},{"id":"https://openalex.org/C203075996","wikidata":"https://www.wikidata.org/wiki/Q139677","display_name":"Operon","level":4,"score":0.5053966045379639},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.49990177154541016},{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.4951564371585846},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.4476732313632965},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.41694340109825134},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.11952149868011475},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.10856613516807556}],"mesh":[{"descriptor_ui":"D000098","descriptor_name":"Acetophenones","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001616","descriptor_name":"beta-Galactosidase","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001616","descriptor_name":"beta-Galactosidase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005816","descriptor_name":"Genetic Complementation Test","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011993","descriptor_name":"Recombinant Fusion Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011993","descriptor_name":"Recombinant Fusion Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012689","descriptor_name":"Sequence Homology, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014166","descriptor_name":"Transferases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D015964","descriptor_name":"Gene Expression Regulation, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016254","descriptor_name":"Mutagenesis, Insertional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016960","descriptor_name":"Agrobacterium tumefaciens","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D016960","descriptor_name":"Agrobacterium tumefaciens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019883","descriptor_name":"Alkyl and Aryl Transferases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1128/jb.174.4.1086-1098.1992","doi":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","is_oa":false,"landing_page_url":"https://doi.org/10.1128/jb.174.4.1086-1098.1992","pdf_url":null,"source":{"id":"https://openalex.org/S133274750","display_name":"Journal of Bacteriology","issn_l":"0021-9193","issn":["0021-9193","1067-8832","1098-5530"],"is_oa":false,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-1","ki-jl-1","medline","norway-1","poland-100","russia-white-list-2"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Bacteriology","raw_type":"journal-article"},{"id":"pmh:oai:pubmedcentral.nih.gov:206401","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/206401","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"J Bacteriol","raw_type":"Text"},{"id":"pmid:1735704","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/1735704","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of bacteriology","raw_type":"Journal Article"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:206401","doi":null,"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/206401","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"J Bacteriol","raw_type":"Text"},"sustainable_development_goals":[{"score":0.40450000762939453,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"study_designs":[],"awards":[{"id":"https://openalex.org/G3755472921","display_name":"AIDS RESEARCH CENTER SUPPORT","funder_award_id":"P30AI027713","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G6204146519","display_name":null,"funder_award_id":"AI-27713","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":69,"referenced_works":["https://openalex.org/W11118856","https://openalex.org/W91301883","https://openalex.org/W124504601","https://openalex.org/W1480285630","https://openalex.org/W1486737319","https://openalex.org/W1541196086","https://openalex.org/W1543863849","https://openalex.org/W1546783991","https://openalex.org/W1550319307","https://openalex.org/W1555021163","https://openalex.org/W1556756986","https://openalex.org/W1557431955","https://openalex.org/W1558365920","https://openalex.org/W1572981177","https://openalex.org/W1616720142","https://openalex.org/W1664307505","https://openalex.org/W1725306524","https://openalex.org/W1801626377","https://openalex.org/W1841521301","https://openalex.org/W1852386817","https://openalex.org/W1909923404","https://openalex.org/W1936538533","https://openalex.org/W1956228355","https://openalex.org/W1960836495","https://openalex.org/W1976497970","https://openalex.org/W1979911160","https://openalex.org/W1985099332","https://openalex.org/W1987355768","https://openalex.org/W1988336515","https://openalex.org/W1994525795","https://openalex.org/W2006997047","https://openalex.org/W2009310436","https://openalex.org/W2010526350","https://openalex.org/W2014059701","https://openalex.org/W2015082827","https://openalex.org/W2015302034","https://openalex.org/W2024275829","https://openalex.org/W2028622989","https://openalex.org/W2032462421","https://openalex.org/W2033632009","https://openalex.org/W2042656486","https://openalex.org/W2050499271","https://openalex.org/W2050556487","https://openalex.org/W2052438423","https://openalex.org/W2062340271","https://openalex.org/W2069008694","https://openalex.org/W2074726038","https://openalex.org/W2088911565","https://openalex.org/W2089084147","https://openalex.org/W2105194335","https://openalex.org/W2107469329","https://openalex.org/W2111955949","https://openalex.org/W2120615761","https://openalex.org/W2128182536","https://openalex.org/W2130278219","https://openalex.org/W2132417094","https://openalex.org/W2138270253","https://openalex.org/W2140656204","https://openalex.org/W2141151664","https://openalex.org/W2142172464","https://openalex.org/W2144634347","https://openalex.org/W2148226716","https://openalex.org/W2158937196","https://openalex.org/W2160607099","https://openalex.org/W2173953112","https://openalex.org/W2176971249","https://openalex.org/W2312694264","https://openalex.org/W2415999270","https://openalex.org/W2487577883"],"related_works":["https://openalex.org/W2912412938","https://openalex.org/W1992493176","https://openalex.org/W2323821747","https://openalex.org/W2313469030","https://openalex.org/W1955422670","https://openalex.org/W1585997913","https://openalex.org/W1636691609","https://openalex.org/W2005252383","https://openalex.org/W138924406","https://openalex.org/W1945824762"],"abstract_inverted_index":{"vir":[0,37,158],"regulon":[1],"expression":[2,35,43,160],"in":[3,26,32,45,78,123,134,150,170],"Agrobacterium":[4,176],"tumefaciens":[5,73,136,152],"involves":[6],"both":[7],"chromosome-":[8],"and":[9,16,56,68,101],"Ti-plasmid-encoded":[10],"gene":[11,21,133,159],"products.":[12],"We":[13],"have":[14],"isolated":[15],"characterized":[17],"a":[18,27,163],"new":[19],"chromosomal":[20],"that":[22],"when":[23],"mutated":[24],"results":[25],"2-":[28],"to":[29,70,94],"10-fold":[30],"reduction":[31,169],"the":[33,79,95,102,116,120,131,171],"induced":[34],"of":[36,83,98,105,119,130,142,173],"genes":[38,109],"by":[39,139,161],"acetosyringone.":[40],"This":[41],"reduced":[42,164],"occurs":[44],"AB":[46],"minimal":[47],"medium":[48],"(pH":[49],"5.5)":[50],"containing":[51,57],"either":[52],"sucrose":[53],"or":[54,61,188],"glucose":[55],"phosphate":[58],"at":[59],"high":[60],"low":[62],"concentrations.":[63],"The":[64,128],"locus":[65,85,97,104],"was":[66,137,191],"cloned":[67],"used":[69],"complement":[71],"A.":[72,135,151],"strains":[74,155,177],"harboring":[75],"Tn5":[76],"insertions":[77],"gene.":[80],"Sequence":[81],"analysis":[82],"this":[84],"revealed":[86],"an":[87],"open":[88],"reading":[89],"frame":[90],"with":[91],"strong":[92],"homology":[93],"miaA":[96,145,153],"Escherichia":[99],"coli":[100,144],"mod5":[103],"Saccharomyces":[106],"cerevisiae.":[107],"These":[108],"encode":[110],"tRNA:":[111],"isopentenyltransferase":[112],"enzymes":[113],"responsible":[114],"for":[115],"specific":[117],"modification":[118],"A-37":[121],"residue":[122],"UNN":[124],"codon":[125],"tRNA":[126,148],"species.":[127],"function":[129],"homologous":[132],"proven":[138],"genetic":[140],"complementation":[141],"E.":[143],"mutant":[146,154,175],"strains.":[147],"undermodification":[149],"may":[156],"reduce":[157],"causing":[162],"translation":[165],"efficiency.":[166],"A":[167],"slight":[168],"virulence":[172],"these":[174],"on":[178,184],"red":[179],"potato":[180],"plants,":[181,190],"but":[182],"not":[183],"tobacco,":[185],"tomato,":[186],"kalanchoe,":[187],"sunflower":[189],"observed.":[192]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-11-04T10:54:05.112534","created_date":"2016-06-24T00:00:00"}
