{"id":"https://openalex.org/W1593666857","doi":null,"title":"FUNCTIONAL ASSIGNMENT TO asl1274 UNKNOWN PROTEIN SEQUENCE IN ANABAENA sp.PCC7120","display_name":"FUNCTIONAL ASSIGNMENT TO asl1274 UNKNOWN PROTEIN SEQUENCE IN ANABAENA sp.PCC7120","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1593666857","mag":"1593666857"},"language":"en","primary_location":{"id":"mag:1593666857","doi":null,"is_oa":false,"landing_page_url":"https://arccjournals.com/uploads/articles/A4533.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S2764414099","display_name":"Indian Journal of Agricultural Research","issn_l":"0367-8245","issn":["0367-8245","0976-058X"],"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":["norway-1","poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/P4324046968","host_organization_name":"Agricultural Research Communication Center","host_organization_lineage":["https://openalex.org/P4324046968"],"host_organization_lineage_names":["Agricultural Research Communication Center"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Indian Journal of Agricultural Research","raw_type":null},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003418660","display_name":"K. V. Ashokan","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"K. V. Ashokan","raw_affiliation_strings":["Department of Biological Science, PVP College, Kavathe Mahankal, Sangli - 416 405, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Science, PVP College, Kavathe Mahankal, Sangli - 416 405, India","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102713974","display_name":"Sasha Patil","orcid":"https://orcid.org/0009-0009-2675-439X","observed_orcids":["https://orcid.org/0009-0009-2675-439X"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sasha Patil","raw_affiliation_strings":["Department of Biological Science, PVP College, Kavathe Mahankal, Sangli - 416 405, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Science, PVP College, Kavathe Mahankal, Sangli - 416 405, India","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"45","issue":"3","first_page":"188","last_page":"194"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.3425000011920929,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.3425000011920929,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.2888000011444092,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.09369999915361404,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/anabaena-sp-pcc-7120","display_name":"Anabaena sp. PCC 7120","score":0.906000018119812},{"id":"https://openalex.org/keywords/ammonium-transporters","display_name":"ammonium transporters","score":0.8510000109672546},{"id":"https://openalex.org/keywords/transmembrane-domain","display_name":"transmembrane domain","score":0.9700000286102295},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"protein function prediction","score":0.6320000290870667},{"id":"https://openalex.org/keywords/cyanobacterial-genome","display_name":"cyanobacterial genome","score":0.7680000066757202}],"concepts":[{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.5874797701835632},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5816166400909424},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.5309065580368042},{"id":"https://openalex.org/C118892022","wikidata":"https://www.wikidata.org/wiki/Q7834587","display_name":"Transmembrane domain","level":3,"score":0.5292072892189026},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5248827338218689},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5198893547058105},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49807000160217285},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4881184995174408},{"id":"https://openalex.org/C171897839","wikidata":"https://www.wikidata.org/wiki/Q417841","display_name":"Protein family","level":3,"score":0.4786844849586487},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.4133206009864807},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.34530404210090637},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:1593666857","doi":null,"is_oa":false,"landing_page_url":"https://arccjournals.com/uploads/articles/A4533.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S2764414099","display_name":"Indian Journal of Agricultural Research","issn_l":"0367-8245","issn":["0367-8245","0976-058X"],"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":["norway-1","poland-20","russia-white-list-3"],"host_organization":"https://openalex.org/P4324046968","host_organization_name":"Agricultural Research Communication Center","host_organization_lineage":["https://openalex.org/P4324046968"],"host_organization_lineage_names":["Agricultural Research Communication Center"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Indian Journal of Agricultural Research","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1574810993","https://openalex.org/W1613664118","https://openalex.org/W1971403296","https://openalex.org/W2026611649","https://openalex.org/W2100186075","https://openalex.org/W2111347880","https://openalex.org/W2136769496"],"related_works":["https://openalex.org/W2791483229","https://openalex.org/W2157939048","https://openalex.org/W2109098292","https://openalex.org/W2473752576","https://openalex.org/W7100818910","https://openalex.org/W7015470297","https://openalex.org/W1968086709","https://openalex.org/W2016569200","https://openalex.org/W7070255949","https://openalex.org/W2189163239"],"abstract_inverted_index":{"The":[0,12,39,54,71,89,114,132,137,145],"genome":[1],"of":[2,5,57,65,75,83,91,112,153],"anabaena":[3],"consists":[4],"a":[6],"single":[7],"chromosome":[8],"and":[9,28,99,150,155],"six":[10,135],"plasmid.":[11],"chromosomal":[13],"genes,":[14],"location":[15],"1506484-1506880,":[16],"coding":[17],"for":[18],"various":[19,66],"protein":[20,24,48,103,127,160],"shows":[21],"that":[22,124,158],"three":[23],"sequences,":[25],"a111268,":[26],"a111273":[27],"asl1274,":[29],"are":[30],"not":[31],"assigned":[32],"to":[33,105,119,129],"any":[34],"function":[35],"i.e.":[36],"unknown":[37,126],"protein.":[38],"sequence":[40,60,77,85],"asl1274":[41],"retrieved":[42],"from":[43],"CyanoBase":[44],"give":[45],"one":[46],"oligotransport":[47],"match":[49,74],"with":[50,117],"BLAST2":[51],"homology":[52],"search.":[53],"SVMProt":[55],"search":[56],"the":[58,76,84,102,110,125,159,163],"same":[59],"gives":[61,134],"ten":[62],"functional":[63],"domains":[64],"functions":[67],"including":[68],"transmembrane":[69],"domain.":[70],"most":[72],"possible":[73],"was":[78],"found":[79],"by":[80,86,96,141,148],"sequential":[81],"BLAST":[82],"using":[87,142],"MODWEB.":[88],"presence":[90],"transmembarne":[92],"domain":[93],"is":[94],"substantiated":[95],"SOSUI":[97],"analysis":[98],"point":[100],"out":[101],"belongs":[104,128],"family":[106],"TC":[107],"2.49":[108],"in":[109,162],"classification":[111],"transporters.":[113],"PDB":[115],"structure":[116,152],"matches":[118,138],"PROSITE":[120,133],"entry":[121],"PS01219":[122],"reveals":[123],"ammonium":[130,164],"transporter.":[131],"matches.":[136],"were":[139],"validated":[140],"VADAR":[143,149],"server.":[144],"hydrophobicity":[146],"profile":[147],"3D":[151],"1U7U":[154],"2NUU":[156],"proves":[157],"included":[161],"transporter":[165],"family.":[166]},"counts_by_year":[],"updated_date":"2025-10-10T17:16:08.811792","created_date":"2016-06-24T00:00:00"}