{"id":"https://openalex.org/W1551268511","doi":null,"title":"Automated Piecewise Affine Registration of Biological Images","display_name":"Automated Piecewise Affine Registration of Biological Images","publication_year":2003,"publication_date":"2003-07-01","ids":{"openalex":"https://openalex.org/W1551268511","mag":"1551268511"},"language":"en","primary_location":{"id":"pmh:oai:CiteSeerX.psu:10.1.1.3.7386","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.3.7386","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-4866.ps.gz","raw_type":"text"},"volume":null,"type":"article","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inria.hal.science/inria-00071717","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063799542","display_name":"Alain Pitiot","orcid":"https://orcid.org/0000-0003-0146-8572","observed_orcids":["https://orcid.org/0000-0003-0146-8572"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alain Pitiot","raw_affiliation_strings":["Medical imaging and robotics"],"raw_orcid":"https://orcid.org/0000-0003-0146-8572","affiliations":[{"raw_affiliation_string":"Medical imaging and robotics","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033034157","display_name":"\u00c9ric Bardinet","orcid":"https://orcid.org/0000-0001-8652-8751","observed_orcids":["https://orcid.org/0000-0001-8652-8751"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"\u00c9ric Bardinet","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100606557","display_name":"Paul M. Thompson","orcid":"https://orcid.org/0000-0002-4720-8867","observed_orcids":["https://orcid.org/0000-0002-4720-8867","https://orcid.org/0000-0003-2476-2803","https://orcid.org/0000-0002-2305-8438","https://orcid.org/0000-0002-3377-7014","https://orcid.org/0000-0003-0271-1896"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paul M. Thompson","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4720-8867","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5035428636","display_name":"Gr\u00e9goire Malandain","orcid":"https://orcid.org/0000-0002-4559-1575","observed_orcids":["https://orcid.org/0000-0002-4559-1575"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gr\u00e9goire Malandain","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4559-1575","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.3155,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.67387362,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.00039999998989515007,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/image-registration","display_name":"image registration","score":0.9679999947547913},{"id":"https://openalex.org/keywords/biological-images","display_name":"biological images","score":0.9290000200271606},{"id":"https://openalex.org/keywords/tissue-sections","display_name":"tissue sections","score":0.9240000247955322},{"id":"https://openalex.org/keywords/block-matching","display_name":"block matching","score":0.7089999914169312},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"hierarchical clustering","score":0.8180000185966492},{"id":"https://openalex.org/keywords/wasserstein-distance","display_name":"Wasserstein distance","score":0.9419999718666077},{"id":"https://openalex.org/keywords/affine-transformation","display_name":"affine transformation","score":0.5040000081062317},{"id":"https://openalex.org/keywords/elastic-transformation","display_name":"elastic transformation","score":0.5609999895095825},{"id":"https://openalex.org/keywords/hybrid-interpolation","display_name":"hybrid interpolation","score":0.5720000267028809},{"id":"https://openalex.org/keywords/frozen-section","display_name":"frozen section","score":0.753000020980835},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"magnetic resonance imaging","score":0.5740000009536743}],"concepts":[{"id":"https://openalex.org/C92757383","wikidata":"https://www.wikidata.org/wiki/Q382497","display_name":"Affine transformation","level":2,"score":0.7052996158599854},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.6763295531272888},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5599030256271362},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.5496823787689209},{"id":"https://openalex.org/C164660894","wikidata":"https://www.wikidata.org/wiki/Q2037833","display_name":"Piecewise","level":2,"score":0.519244909286499},{"id":"https://openalex.org/C137800194","wikidata":"https://www.wikidata.org/wiki/Q11713455","display_name":"Interpolation (computer graphics)","level":3,"score":0.4966281056404114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4819783568382263},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4575244188308716},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.45111703872680664},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.43080881237983704},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4289160966873169},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4153832793235779},{"id":"https://openalex.org/C126795593","wikidata":"https://www.wikidata.org/wiki/Q7333813","display_name":"Rigid transformation","level":2,"score":0.41357824206352234},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4131813943386078},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36534589529037476},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.18034899234771729},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.11538133025169373},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:CiteSeerX.psu:10.1.1.3.7386","doi":null,"is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.3.7386","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.inria.fr/INRIA/publication/publi-ps-gz/RR/RR-4866.ps.gz","raw_type":"text"},{"id":"pmh:oai:HAL:inria-00071717v1","doi":null,"is_oa":true,"landing_page_url":"https://inria.hal.science/inria-00071717","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"RR-4866, INRIA. 2003","raw_type":"info:eu-repo/semantics/report"},{"id":"mag:1551268511","doi":null,"is_oa":false,"landing_page_url":"https://hal.inria.fr/inria-00071717","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:HAL:inria-00071717v1","doi":null,"is_oa":true,"landing_page_url":"https://inria.hal.science/inria-00071717","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I4405252976","host_organization_name":"Centre pour la Communication Scientifique Directe","host_organization_lineage":["https://openalex.org/I4405252976"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"RR-4866, INRIA. 2003","raw_type":"info:eu-repo/semantics/report"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1523662154","https://openalex.org/W2021189280","https://openalex.org/W7098209286","https://openalex.org/W7099578202","https://openalex.org/W7097837783","https://openalex.org/W7099472582","https://openalex.org/W1966119235","https://openalex.org/W2543415321","https://openalex.org/W4404901602","https://openalex.org/W2138593601"],"abstract_inverted_index":{"This":[0],"report":[1],"tackles":[2],"the":[3,17,110,124,131,149,155,184],"registration":[4,56],"of":[5,28,42,66,95,103,123,133,157,163,186,193],"2D":[6,14],"biological":[7],"images":[8,15,31],"(histological":[9],"sections":[10,196],"or":[11,19,24,44],"autoradiographs)":[12],"to":[13,147],"from":[16,60,97,190],"same":[18],"different":[20],"modalities":[21],"(e.g.,":[22],"histology":[23,177],"MRI).":[25],"The":[26],"process":[27],"acquiring":[29],"these":[30],"typically":[32],"induces":[33],"composite":[34],"transformations":[35,47,125],"that":[36],"we":[37,69,99],"model":[38],"as":[39],"a":[40,55,64,72,79,93,140,161,187,191,201,205],"number":[41,94],"rigid":[43,207],"affine":[45],"local":[46],"embedded":[48],"in":[49],"an":[50],"elastic":[51],"one.":[52],"We":[53,153,181],"propose":[54],"approach":[57,159],"closely":[58],"derived":[59],"this":[61,90],"model.":[62],"Given":[63],"pair":[65],"input":[67],"images,":[68,173],"first":[70],"compute":[71],"dense":[73],"similarity":[74],"field":[75,91],"between":[76],"them":[77],"with":[78,127,204],"block":[80],"matching":[81],"algorithm.":[82],"A":[83],"hierarchical":[84],"clustering":[85,106],"algorithm":[86,107],"then":[87],"automatically":[88],"partitions":[89],"into":[92],"classes":[96],"which":[98],"extract":[100],"independent":[101],"pairs":[102,132],"sub-images.":[104],"Our":[105],"relies":[108],"on":[109],"Earth":[111],"mover's":[112],"distribution":[113],"metric":[114],"and":[115,139,165,170,178,197],"is":[116,145],"additionally":[117],"guided":[118],"by":[119],"robust":[120],"least-square":[121],"estimation":[122],"associated":[126],"each":[128],"cluster.":[129],"Finally,":[130],"sub-images":[134],"are,":[135],"independently,":[136],"affinely":[137],"registered":[138,151],"hybrid":[141],"affine/non-linear":[142],"interpolation":[143],"scheme":[144],"used":[146],"compose":[148],"output":[150],"image.":[152],"investigate":[154],"behavior":[156],"our":[158],"under":[160],"variety":[162],"conditions,":[164],"discuss":[166],"examples":[167],"using":[168],"simulated":[169],"real":[171],"medical":[172],"including":[174],"MRI,":[175],"autoradiography,":[176],"cryosection":[179],"data.":[180],"also":[182],"detail":[183],"reconstruction":[185,202],"3-D":[188],"volume":[189],"series":[192],"2-D":[194],"histological":[195],"compare":[198],"it":[199],"against":[200],"obtained":[203],"global":[206],"approach.":[208]},"counts_by_year":[],"updated_date":"2026-11-05T12:25:35.769452","created_date":"2016-06-24T00:00:00"}
