{"id":"https://openalex.org/W153557","doi":null,"title":"Summer-type hypersensitivity pneumonitis. T-cell receptor V gene usage in BALF T-cells from 3 cases in one family.","display_name":"Summer-type hypersensitivity pneumonitis. T-cell receptor V gene usage in BALF T-cells from 3 cases in one family.","publication_year":1998,"publication_date":"1998-09-01","ids":{"openalex":"https://openalex.org/W153557","mag":"153557","pmid":"https://pubmed.ncbi.nlm.nih.gov/9789896"},"language":"en","primary_location":{"id":"pmid:9789896","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/9789896","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG","raw_type":"Case Reports"},"volume":null,"type":"article","indexed_in":["pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044311448","display_name":"Michio Shigematsu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"M Shigematsu","raw_affiliation_strings":["Department of Pulmonary Medicine, Kyoto University, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pulmonary Medicine, Kyoto University, Japan","institution_ids":["https://openalex.org/I22299242"]}]},{"author_position":"middle","author":{"id":null,"display_name":"S Nagai","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"S Nagai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"K Nishimura","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"K Nishimura","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100819612","display_name":"Takateru Izumi","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"T Izumi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102005476","display_name":"Anders Ekl\u00fand","orcid":"https://orcid.org/0000-0002-7263-7057","observed_orcids":["https://orcid.org/0000-0002-7263-7057"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"A G Eklund","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5000843678","display_name":"Johan Gr\u00fcnewald","orcid":"https://orcid.org/0000-0003-0473-3984","observed_orcids":["https://orcid.org/0000-0003-0473-3984"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J Grunewald","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.0049,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.7512768,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"15","issue":"2","first_page":"173","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10870","display_name":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","score":0.9467999935150146,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10870","display_name":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","score":0.9467999935150146,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11189","display_name":"Transplantation: Methods and Outcomes","score":0.011099999770522118,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11037","display_name":"Fungal Infections and Studies","score":0.008200000040233135,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/summer-type-hypersensitivity-pneumonitis","display_name":"summer-type hypersensitivity pneumonitis","score":0.9290000200271606},{"id":"https://openalex.org/keywords/trichosporon-cutaneum","display_name":"Trichosporon cutaneum","score":0.968999981880188},{"id":"https://openalex.org/keywords/t-cell-receptor-v-gene-usage","display_name":"T cell receptor V gene usage","score":0.8970000147819519},{"id":"https://openalex.org/keywords/familial-occurrence","display_name":"familial occurrence","score":0.7110000252723694},{"id":"https://openalex.org/keywords/hla-types","display_name":"HLA types","score":0.7289999723434448},{"id":"https://openalex.org/keywords/cd8-t-cells","display_name":"CD8+ T cells","score":0.9700000286102295},{"id":"https://openalex.org/keywords/t-cell-expansion","display_name":"T cell expansion","score":0.6890000104904175},{"id":"https://openalex.org/keywords/granulomatous-lung-disease","display_name":"granulomatous lung disease","score":0.8399999737739563}],"concepts":[{"id":"https://openalex.org/C19317047","wikidata":"https://www.wikidata.org/wiki/Q412037","display_name":"T-cell receptor","level":4,"score":0.8821549415588379},{"id":"https://openalex.org/C2777961210","wikidata":"https://www.wikidata.org/wiki/Q927148","display_name":"Bronchoalveolar lavage","level":3,"score":0.7375161051750183},{"id":"https://openalex.org/C167672396","wikidata":"https://www.wikidata.org/wiki/Q417800","display_name":"CD8","level":3,"score":0.6922755837440491},{"id":"https://openalex.org/C2777134676","wikidata":"https://www.wikidata.org/wiki/Q35890","display_name":"Hypersensitivity pneumonitis","level":3,"score":0.6921244263648987},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.5530114769935608},{"id":"https://openalex.org/C188280979","wikidata":"https://www.wikidata.org/wiki/Q911125","display_name":"Human leukocyte antigen","level":3,"score":0.5281821489334106},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5234058499336243},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.48586055636405945},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.47236424684524536},{"id":"https://openalex.org/C2992881475","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T lymphocyte","level":3,"score":0.426052451133728},{"id":"https://openalex.org/C542903549","wikidata":"https://www.wikidata.org/wiki/Q422248","display_name":"Monoclonal antibody","level":3,"score":0.41240906715393066},{"id":"https://openalex.org/C2777714996","wikidata":"https://www.wikidata.org/wiki/Q7886","display_name":"Lung","level":2,"score":0.36195239424705505},{"id":"https://openalex.org/C153911025","wikidata":"https://www.wikidata.org/wiki/Q7202","display_name":"Molecular biology","level":1,"score":0.34401482343673706},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.31644806265830994},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26818931102752686},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.17653942108154297},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1247914731502533}],"mesh":[{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000542","descriptor_name":"Alveolitis, Extrinsic Allergic","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D000949","descriptor_name":"Histocompatibility Antigens Class II","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001706","descriptor_name":"Biopsy","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001992","descriptor_name":"Bronchoalveolar Lavage Fluid","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D005500","descriptor_name":"Follow-Up Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006650","descriptor_name":"Histocompatibility Testing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012621","descriptor_name":"Seasons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D015496","descriptor_name":"CD4-Positive T-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D016516","descriptor_name":"CD4-CD8 Ratio","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016693","descriptor_name":"Receptors, Antigen, T-Cell, alpha-beta","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018414","descriptor_name":"CD8-Positive T-Lymphocytes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D019674","descriptor_name":"Genes, T-Cell Receptor beta","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true}],"locations_count":2,"locations":[{"id":"pmid:9789896","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/9789896","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG","raw_type":"Case Reports"},{"id":"mag:153557","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/9789896","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"PubMed","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.98580002784729,"display_name":"Good health and well-being"}],"sustainable_development_goals_aurora":[{"id":"https://metadata.un.org/sdg/3","score":0.44999998807907104,"display_name":"Good health and well-being"}],"study_designs":[{"id":"https://openalex.org/study-designs/case-report","display_name":"Case Report"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2078231533","https://openalex.org/W329453812","https://openalex.org/W2562173952","https://openalex.org/W2416561643","https://openalex.org/W2301754248","https://openalex.org/W2188820297","https://openalex.org/W2020741312","https://openalex.org/W2077122437","https://openalex.org/W2437995656","https://openalex.org/W2153927626"],"abstract_inverted_index":{"BACKGROUND":[0],"AND":[1],"AIM":[2],"OF":[3],"THE":[4],"WORK:":[5],"Hypersensitivity":[6],"pneumonitis":[7],"(HP)":[8],"is":[9,47,56],"a":[10,16,175,215],"granulomatous":[11],"lung":[12,71],"disease":[13],"characterized":[14],"by":[15,44,58],"T":[17,217],"lymphocyte":[18],"bronchiolalveolitis":[19],"and":[20,54,73,162,227],"in":[21,79,92,129,136,201,207],"several":[22,195],"recent":[23],"studies":[24],"the":[25,48,59,76,122,137,153,159,163,170,181,186,224,228],"preferential":[26,146],"use":[27],"of":[28,32,52,89,169,185,194],"V":[29,110,148,164,197,230],"beta":[30],"regions":[31],"T-cell":[33,72],"receptor":[34],"(TCR)":[35],"has":[36],"been":[37],"demonstrated.":[38],"In":[39,115,167],"Japan,":[40],"summer-type":[41,90,205],"HP,":[42,53],"caused":[43],"Trichosporon":[45],"cutaneum,":[46],"most":[49,133],"prevalent":[50],"type":[51,78,161,226],"it":[55],"known":[57],"familial":[60],"occurrence.":[61],"To":[62],"clarify":[63],"whether":[64],"TCR":[65,97,109,130,147,187,196,229],"expression":[66,98,131],"could":[67,212],"be":[68],"restricted":[69],"on":[70,99],"associate":[74],"with":[75,107,204],"HLA":[77,117,160,225],"an":[80],"organic":[81],"antigen-driven":[82],"hyperimmune":[83],"status,":[84],"we":[85,143,211],"examined":[86],"three":[87,154,171,178,202],"cases":[88,155,172,203],"HP":[91,206],"one":[93,208],"Japanese":[94],"family.":[95],"METHODS:":[96],"bronchoalveolar":[100],"lavage":[101,177],"(BAL)":[102],"fluid":[103,139],"T-cells":[104],"was":[105,199],"analyzed":[106,120],"13":[108],"gene":[111,149,165,231],"specific":[112],"monoclonal":[113],"antibodies.":[114],"addition,":[116],"types":[118],"were":[119,132,189],"using":[121],"microlymphocyte":[123],"toxicity":[124],"method.":[125],"RESULTS:":[126],"The":[127],"changes":[128],"frequently":[134],"found":[135,144],"BAL":[138],"CD8+":[140],"subset,":[141],"but":[142,210],"no":[145],"usage":[150,193],"common":[151,216],"to":[152],"or":[156],"correlation":[157,222],"between":[158,223],"usage.":[166,232],"two":[168],"who":[173],"underwent":[174],"second":[176],"months":[179],"after":[180],"first":[182],"one,":[183],"some":[184],"expansions":[188],"preserved.":[190],"CONCLUSION:":[191],"Preferential":[192],"genes":[198],"observed":[200],"family,":[209],"find":[213],"neither":[214],"cell":[218],"expansion":[219],"nor":[220],"any":[221]},"counts_by_year":[],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2016-06-24T00:00:00"}
