{"id":"https://openalex.org/W1521283139","doi":"https://doi.org/10.3906/zoo-1405-75","title":"Determination of genetic variations between Apodemus mystacinus populations distributed in Turkey inferred from mtDNA PCR\u2013RFLP","display_name":"Determination of genetic variations between Apodemus mystacinus populations distributed in Turkey inferred from mtDNA PCR\u2013RFLP","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W1521283139","doi":"https://doi.org/10.3906/zoo-1405-75","mag":"1521283139"},"language":"en","primary_location":{"id":"doi:10.3906/zoo-1405-75","doi":"https://doi.org/10.3906/zoo-1405-75","is_oa":true,"landing_page_url":"https://doi.org/10.3906/zoo-1405-75","pdf_url":"https://journals.tubitak.gov.tr/cgi/viewcontent.cgi?article=1600&context=zoology","source":{"id":"https://openalex.org/S4394735477","display_name":"TURKISH JOURNAL OF ZOOLOGY","issn_l":"1300-0179","issn":["1300-0179","1303-6114"],"is_oa":false,"is_in_doaj":true,"is_core":false,"listed_in":["ddh","doaj","dongbi-c","jufo-1","poland-40","russia-white-list-2","tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ZOOLOGY","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://journals.tubitak.gov.tr/cgi/viewcontent.cgi?article=1600&context=zoology","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073581166","display_name":"G\u00fcl Olgun Karacan","orcid":"https://orcid.org/0000-0002-7160-5766","observed_orcids":["https://orcid.org/0000-0002-7160-5766"]},"institutions":[{"id":"https://openalex.org/I121596126","display_name":"Aksaray University","ror":"https://ror.org/026db3d50","country_code":"TR","type":"education","lineage":["https://openalex.org/I121596126"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"G\u00fcl OLGUN KARACAN","raw_affiliation_strings":["Department of Biology , Faculty of Science and Letters , Aksaray University , Aksaray , Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology , Faculty of Science and Letters , Aksaray University , Aksaray , Turkey","institution_ids":["https://openalex.org/I121596126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102918488","display_name":"Reyhan \u00c7olak","orcid":"https://orcid.org/0000-0003-1031-4073","observed_orcids":["https://orcid.org/0000-0003-1031-4073"]},"institutions":[{"id":"https://openalex.org/I149218525","display_name":"Ankara University","ror":"https://ror.org/01wntqw50","country_code":"TR","type":"education","lineage":["https://openalex.org/I149218525"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Reyhan \u00c7OLAK","raw_affiliation_strings":["Department of Biology , Faculty of Science , Ankara University , Ankara , Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology , Faculty of Science , Ankara University , Ankara , Turkey","institution_ids":["https://openalex.org/I149218525"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064871315","display_name":"Erc\u00fcment \u00c7olak","orcid":"https://orcid.org/0000-0001-5826-1615","observed_orcids":["https://orcid.org/0000-0001-5826-1615"]},"institutions":[{"id":"https://openalex.org/I149218525","display_name":"Ankara University","ror":"https://ror.org/01wntqw50","country_code":"TR","type":"education","lineage":["https://openalex.org/I149218525"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Erc\u00fcment \u00c7OLAK","raw_affiliation_strings":["Department of Biology , Faculty of Science , Ankara University , Ankara , Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology , Faculty of Science , Ankara University , Ankara , Turkey","institution_ids":["https://openalex.org/I149218525"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2283,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.59109983,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":94},"biblio":{"volume":"39","issue":null,"first_page":"630","last_page":"642"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/apodemus-mystacinus","display_name":"Apodemus mystacinus","score":0.9990000128746033},{"id":"https://openalex.org/keywords/population-genetic-diversity","display_name":"population genetic variation","score":0.7590000033378601},{"id":"https://openalex.org/keywords/mitochondrial-dna","display_name":"mitochondrial DNA","score":0.8920000195503235},{"id":"https://openalex.org/keywords/cytochrome-b","display_name":"cytochrome b","score":0.996999979019165},{"id":"https://openalex.org/keywords/d-loop","display_name":"D-loop","score":0.9869999885559082},{"id":"https://openalex.org/keywords/haplotype-diversity","display_name":"haplotype diversity","score":0.9580000042915344},{"id":"https://openalex.org/keywords/genetic-differentiation","display_name":"genetic differentiation","score":0.6349999904632568},{"id":"https://openalex.org/keywords/anatolia","display_name":"Anatolia","score":0.6349999904632568},{"id":"https://openalex.org/keywords/turkey","display_name":"Turkey","score":0.675000011920929}],"concepts":[{"id":"https://openalex.org/C2776906770","wikidata":"https://www.wikidata.org/wiki/Q936454","display_name":"HaeIII","level":5,"score":0.8411843776702881},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7180200815200806},{"id":"https://openalex.org/C8920555","wikidata":"https://www.wikidata.org/wiki/Q3150409","display_name":"Fixation index","level":5,"score":0.7147563695907593},{"id":"https://openalex.org/C2778050382","wikidata":"https://www.wikidata.org/wiki/Q4751104","display_name":"Analysis of molecular variance","level":5,"score":0.6225711703300476},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.5448252558708191},{"id":"https://openalex.org/C194898557","wikidata":"https://www.wikidata.org/wiki/Q1779497","display_name":"UPGMA","level":4,"score":0.5355747938156128},{"id":"https://openalex.org/C168007829","wikidata":"https://www.wikidata.org/wiki/Q857299","display_name":"Restriction fragment length polymorphism","level":4,"score":0.5253909230232239},{"id":"https://openalex.org/C26589402","wikidata":"https://www.wikidata.org/wiki/Q7068267","display_name":"Nucleotide diversity","level":5,"score":0.42999985814094543},{"id":"https://openalex.org/C148292235","wikidata":"https://www.wikidata.org/wiki/Q3774486","display_name":"Cytochrome b","level":4,"score":0.4197048544883728},{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.39583325386047363},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3581210970878601},{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.3454122543334961},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.33587098121643066},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.3286660313606262},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.1876089870929718},{"id":"https://openalex.org/C46576788","wikidata":"https://www.wikidata.org/wiki/Q5532925","display_name":"Genetic structure","level":4,"score":0.18271556496620178},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.15970748662948608},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.0993185043334961},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07241812348365784},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3906/zoo-1405-75","doi":"https://doi.org/10.3906/zoo-1405-75","is_oa":true,"landing_page_url":"https://doi.org/10.3906/zoo-1405-75","pdf_url":"https://journals.tubitak.gov.tr/cgi/viewcontent.cgi?article=1600&context=zoology","source":{"id":"https://openalex.org/S4394735477","display_name":"TURKISH JOURNAL OF ZOOLOGY","issn_l":"1300-0179","issn":["1300-0179","1303-6114"],"is_oa":false,"is_in_doaj":true,"is_core":false,"listed_in":["ddh","doaj","dongbi-c","jufo-1","poland-40","russia-white-list-2","tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ZOOLOGY","raw_type":"journal-article"},{"id":"pmh:oai:dergipark.gov.tr:article/154269","doi":null,"is_oa":false,"landing_page_url":"http://dergipark.gov.tr/tbtkzoology/issue/12683/154269","pdf_url":null,"source":{"id":"https://openalex.org/S4306401840","display_name":"DergiPark (Istanbul University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I67581229","host_organization_name":"Istanbul University","host_organization_lineage":["https://openalex.org/I67581229"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"\\n Volume: 39, Issue: 4\\n 630-642\\n \\n","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3906/zoo-1405-75","doi":"https://doi.org/10.3906/zoo-1405-75","is_oa":true,"landing_page_url":"https://doi.org/10.3906/zoo-1405-75","pdf_url":"https://journals.tubitak.gov.tr/cgi/viewcontent.cgi?article=1600&context=zoology","source":{"id":"https://openalex.org/S4394735477","display_name":"TURKISH JOURNAL OF ZOOLOGY","issn_l":"1300-0179","issn":["1300-0179","1303-6114"],"is_oa":false,"is_in_doaj":true,"is_core":false,"listed_in":["ddh","doaj","dongbi-c","jufo-1","poland-40","russia-white-list-2","tr-dizin"],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ZOOLOGY","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1521283139.pdf","grobid_xml":"https://content.openalex.org/works/W1521283139.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W93588716","https://openalex.org/W209101246","https://openalex.org/W1491713847","https://openalex.org/W1579518664","https://openalex.org/W1606053382","https://openalex.org/W1780122346","https://openalex.org/W1864368029","https://openalex.org/W1890916876","https://openalex.org/W1968170966","https://openalex.org/W1976020359","https://openalex.org/W1989340880","https://openalex.org/W1990323182","https://openalex.org/W2002977613","https://openalex.org/W2008246009","https://openalex.org/W2011912496","https://openalex.org/W2025662260","https://openalex.org/W2030966943","https://openalex.org/W2033259142","https://openalex.org/W2033634207","https://openalex.org/W2046457470","https://openalex.org/W2047521905","https://openalex.org/W2060487413","https://openalex.org/W2075923653","https://openalex.org/W2082594342","https://openalex.org/W2093634003","https://openalex.org/W2095348588","https://openalex.org/W2100444509","https://openalex.org/W2101683500","https://openalex.org/W2115837217","https://openalex.org/W2126753786","https://openalex.org/W2132297696","https://openalex.org/W2133279425","https://openalex.org/W2136454196","https://openalex.org/W2138045738","https://openalex.org/W2151312508","https://openalex.org/W2154662049","https://openalex.org/W2155649556","https://openalex.org/W2169433658","https://openalex.org/W2172905986","https://openalex.org/W2183707334","https://openalex.org/W3085952213","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2946575575","https://openalex.org/W2562966889","https://openalex.org/W1890916876","https://openalex.org/W7010066296","https://openalex.org/W4251286257","https://openalex.org/W4389511849","https://openalex.org/W3158275940","https://openalex.org/W4396736231","https://openalex.org/W112306849","https://openalex.org/W4409387039"],"abstract_inverted_index":{"The":[0,63,91],"rocky":[1],"mouse,":[2],"Apodemus":[3],"mystacinus,":[4],"is":[5],"a":[6],"rodent":[7],"species":[8],"distributed":[9,88],"in":[10,20,89,95],"Anatolia.":[11],"A":[12],"total":[13],"of":[14,29,35,66,70,124,131],"108":[15],"specimens":[16],"from":[17,33,46,54,108],"19":[18],"localities":[19],"Turkey":[21,125],"were":[22,126],"collected":[23],"to":[24,110],"study":[25,98],"the":[26,60,67,96,102,117,148],"molecular":[27,132],"variation":[28],"A.":[30,78,81,85,121],"Mystacinus":[31,122],"inferred":[32],"RFLP":[34],"mtDNA":[36],"cytochrome":[37],"b":[38],"(cytb)":[39],"and":[40,44,49,52,72,84],"D-loop.":[41],"MboI,":[42,50],"HaeIII,":[43],"RsaI":[45],"cytb":[47,71],"digestion":[48,56],"BfaI,":[51],"HinfI":[53],"D-loop":[55,73],"showed":[57],"differentiation":[58],"among":[59,116,143],"studied":[61],"specimens.":[62],"UPGMA":[64],"dendrogram":[65],"combined":[68],"data":[69],"indicated":[74,113],"3":[75,120],"main":[76],"clades,":[77],"M.":[79,82,86],"Euxinus,":[80],"Mystacinus,":[83],"Smyrnensis,":[87],"Turkey.":[90],"haplotype":[92],"diversity":[93,115,140],"observed":[94],"present":[97],"was":[99,141],"high.":[100],"Furthermore,":[101],"fixation":[103],"index":[104],"values":[105],"(FST)":[106],"ranged":[107],"0.75093":[109],"0.83384,":[111],"which":[112],"high":[114],"clades.":[118],"These":[119],"clades":[123],"also":[127],"supported":[128],"by":[129,136],"analysis":[130],"variance":[133],"(AMOVA)":[134],"results,":[135],"revealing":[137],"that":[138],"genetic":[139],"higher":[142],"groups":[144],"(79.55%)":[145],"than":[146],"within":[147],"groups.":[149]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-08-19T15:00:24.278416","created_date":"2016-06-24T00:00:00"}