{"id":"https://openalex.org/W1483368366","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","title":"Isolation of non-pathogenic Agrobacterium spp. biovar 1 from agricultural soils in Slovenia","display_name":"Isolation of non-pathogenic Agrobacterium spp. biovar 1 from agricultural soils in Slovenia","publication_year":2014,"publication_date":"2014-04-18","ids":{"openalex":"https://openalex.org/W1483368366","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","mag":"1483368366"},"language":"en","primary_location":{"id":"pmh:oai:doaj.org/article:97d7f5017e654b0583ab7c691631879b","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","is_oa":false,"landing_page_url":"https://doaj.org/article/97d7f5017e654b0583ab7c691631879b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Phytopathologia Mediterranea, Vol 53, Iss 1 (2014)","raw_type":"article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.cabdirect.org/abstracts/20143367711.html","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029510260","display_name":"Janja Lamov\u0161ek","orcid":"https://orcid.org/0000-0001-6358-4486","observed_orcids":["https://orcid.org/0000-0001-6358-4486"]},"institutions":[{"id":"https://openalex.org/I4210125532","display_name":"Agricultural institute of Slovenia","ror":"https://ror.org/030dahd49","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210125532"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Janja Lamov\u0161ek","raw_affiliation_strings":["Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana"],"raw_orcid":"https://orcid.org/0000-0001-6358-4486","affiliations":[{"raw_affiliation_string":"Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana","institution_ids":["https://openalex.org/I4210125532"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037611247","display_name":"Barbara Geri\u010d Stare","orcid":"https://orcid.org/0000-0002-2334-8830","observed_orcids":["https://orcid.org/0000-0002-2334-8830"]},"institutions":[{"id":"https://openalex.org/I4210125532","display_name":"Agricultural institute of Slovenia","ror":"https://ror.org/030dahd49","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210125532"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Barbara Geri\u010d Stare","raw_affiliation_strings":["Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana"],"raw_orcid":"https://orcid.org/0000-0002-2334-8830","affiliations":[{"raw_affiliation_string":"Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana","institution_ids":["https://openalex.org/I4210125532"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108113622","display_name":"Gregor Urek","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210125532","display_name":"Agricultural institute of Slovenia","ror":"https://ror.org/030dahd49","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210125532"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Gregor Urek","raw_affiliation_strings":["Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Agricultural Institute of Slovenia#R##N#Plant Protection Department#R##N#Hacquetova ulica 17#R##N#SI-1000 Ljubljana","institution_ids":["https://openalex.org/I4210125532"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210125532"],"apc_list":null,"apc_paid":null,"fwci":1.0749,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.77356239,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":88,"max":95},"biblio":{"volume":"53","issue":"1","first_page":"130","last_page":"139"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9804999828338623,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.011900000274181366,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10825","display_name":"Plant Pathogens and Fungal Diseases","score":0.0024999999441206455,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/crown-gall","display_name":"crown gall","score":0.9309999942779541},{"id":"https://openalex.org/keywords/agricultural-soils","display_name":"agricultural soils","score":0.7360000014305115},{"id":"https://openalex.org/keywords/fruit-trees","display_name":"fruit trees","score":0.7020000219345093},{"id":"https://openalex.org/keywords/reca-gene","display_name":"recA gene","score":0.7429999709129333},{"id":"https://openalex.org/keywords/genomic-species","display_name":"genomic species","score":0.8090000152587891},{"id":"https://openalex.org/keywords/bioassay","display_name":"bioassay","score":0.6840000152587891},{"id":"https://openalex.org/keywords/soil-bacteria","display_name":"soil bacteria","score":0.6119999885559082},{"id":"https://openalex.org/keywords/slovenia","display_name":"Slovenia","score":0.5220000147819519}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8908683657646179},{"id":"https://openalex.org/C2779656422","wikidata":"https://www.wikidata.org/wiki/Q2700446","display_name":"Agrobacterium","level":4,"score":0.8103054165840149},{"id":"https://openalex.org/C2778967756","wikidata":"https://www.wikidata.org/wiki/Q1972080","display_name":"Biovar","level":3,"score":0.7110697031021118},{"id":"https://openalex.org/C2778400979","wikidata":"https://www.wikidata.org/wiki/Q143720","display_name":"Crown (dentistry)","level":2,"score":0.6058671474456787},{"id":"https://openalex.org/C2777451525","wikidata":"https://www.wikidata.org/wiki/Q224107","display_name":"Gall","level":2,"score":0.6050572395324707},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.5210087299346924},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.45899727940559387},{"id":"https://openalex.org/C180754005","wikidata":"https://www.wikidata.org/wiki/Q80726","display_name":"Allele","level":3,"score":0.4233846962451935},{"id":"https://openalex.org/C42972112","wikidata":"https://www.wikidata.org/wiki/Q170201","display_name":"Veterinary medicine","level":1,"score":0.3646388053894043},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.3556922972202301},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2524929642677307},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21776187419891357},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.21346810460090637},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.17131736874580383},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C199343813","wikidata":"https://www.wikidata.org/wiki/Q12128","display_name":"Dentistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:doaj.org/article:97d7f5017e654b0583ab7c691631879b","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","is_oa":false,"landing_page_url":"https://doaj.org/article/97d7f5017e654b0583ab7c691631879b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Phytopathologia Mediterranea, Vol 53, Iss 1 (2014)","raw_type":"article"},{"id":"mag:1483368366","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","is_oa":true,"landing_page_url":"https://www.cabdirect.org/abstracts/20143367711.html","pdf_url":null,"source":{"id":"https://openalex.org/S2416839","display_name":"Phytopathologia Mediterranea","issn_l":"0031-9465","issn":["0031-9465","1593-2095"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320196","host_organization_name":"Firenze University Press","host_organization_lineage":["https://openalex.org/P4310320196"],"host_organization_lineage_names":["Firenze University Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Phytopathologia Mediterranea","raw_type":null}],"best_oa_location":{"id":"mag:1483368366","doi":"https://doi.org/10.14601/phytopathol_mediterr-12706","is_oa":true,"landing_page_url":"https://www.cabdirect.org/abstracts/20143367711.html","pdf_url":null,"source":{"id":"https://openalex.org/S2416839","display_name":"Phytopathologia Mediterranea","issn_l":"0031-9465","issn":["0031-9465","1593-2095"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-c","jufo-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320196","host_organization_name":"Firenze University Press","host_organization_lineage":["https://openalex.org/P4310320196"],"host_organization_lineage_names":["Firenze University Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Phytopathologia Mediterranea","raw_type":null},"sustainable_development_goals":[{"score":0.8409000039100647,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"},{"score":0.4390000104904175,"id":"https://metadata.un.org/sdg/15","display_name":"Life on land"}],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W7001011522","https://openalex.org/W2474066275","https://openalex.org/W7110147876","https://openalex.org/W1976447100","https://openalex.org/W2111031143","https://openalex.org/W7213292904","https://openalex.org/W2962486861","https://openalex.org/W2285343787","https://openalex.org/W1965836373","https://openalex.org/W2175741506"],"abstract_inverted_index":{"The":[0],"disease":[1],"crown":[2],"gall,":[3],"which":[4],"causes":[5],"damage":[6],"on":[7,60,108,176],"perennial":[8],"agricultural":[9,29],"crops,":[10],"is":[11],"economically":[12],"important":[13],"in":[14,25,40,142,150],"many":[15],"countries.":[16],"We":[17],"therefore":[18],"explored":[19],"the":[20,63,77,134,159],"presence":[21],"of":[22,28,43,48,62,67,76,89,133,172],"Agrobacterium":[23,68,91],"spp.":[24,69],"a":[26,46,109],"variety":[27],"soils":[30],"where":[31,45],"fruit":[32,49],"trees":[33],"are":[34,52],"grown.":[35],"Most":[36],"samples":[37,80],"were":[38,57,72,94,102,116,137,168],"collected":[39],"four":[41,149],"regions":[42],"Slovenia":[44],"majority":[47],"tree":[50],"plantations":[51],"situated.":[53],"Crown":[54],"gall-affected":[55],"plants":[56],"not":[58],"observed":[59,169],"any":[61],"sampling":[64],"sites.":[65],"Members":[66],"biovar":[70],"1":[71],"isolated":[73],"from":[74,84],"63":[75],"72":[78],"soil":[79],"(88%),":[81],"but":[82],"none":[83],"forest":[85],"soil.":[86],"All":[87],"isolates":[88,115,124],"this":[90],"species":[92,106,120],"complex":[93],"determined":[95],"to":[96,104,146,153],"be":[97],"non-pathogenic":[98],"by":[99],"biotests":[100],"and":[101,122,148,163,174],"assigned":[103],"genomic":[105,119,129],"based":[107],"recA":[110,135],"allele":[111],"sequence":[112],"analysis.":[113],"Fourty-three":[114],"allocated":[117],"into":[118,125],"G1":[121,143,173],"26":[123],"G4.":[126],"Among":[127],"both":[128],"species,":[130],"new":[131,140],"alleles":[132,141,156],"gene":[136],"recognized:":[138],"seven":[139],"(denominated":[144],"G1-15":[145],"G1-21)":[147],"G4":[151,175],"(G4-7":[152],"G4-10).":[154],"Two":[155],"predominated":[157],"among":[158],"Slovenian":[160],"strains,":[161],"recA-G1-15":[162],"recA-G4-2.":[164],"Different":[165],"colony":[166],"morphologies":[167],"between":[170],"strains":[171],"KB":[177],"medium.":[178]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":2}],"updated_date":"2026-10-28T10:33:24.094632","created_date":"2016-06-24T00:00:00"}